RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 PDXDC1Q6P996 788 aa9.99□□□□□ -0.81
TDP1-202ENST00000393452 C1orf186Q6ZWK4 172 aa9.99□□□□□ -0.81
TDP1-202ENST00000393452 CCDC155Q8N6L0 562 aa9.99□□□□□ -0.81
TDP1-202ENST00000393452 PRPF38AQ8NAV1 312 aaKnown RBP9.99□□□□□ -0.81
TDP1-202ENST00000393452 NEK11Q8NG66 645 aa9.99□□□□□ -0.81
TDP1-202ENST00000393452 SYN2Q92777 582 aaPredicted RBP9.99□□□□□ -0.81
TDP1-202ENST00000393452 JAKMIP2Q96AA8 810 aa9.99□□□□□ -0.81
TDP1-202ENST00000393452 CCDC42Q96M95 316 aa9.99□□□□□ -0.81
TDP1-202ENST00000393452 WDR11Q9BZH6 1224 aa9.99□□□□□ -0.81
TDP1-202ENST00000393452 ZHX3Q9H4I2 956 aa9.99□□□□□ -0.81
TDP1-202ENST00000393452 ARGLU1Q9NWB6 273 aaPredicted RBP9.99□□□□□ -0.81
TDP1-202ENST00000393452 CEP72Q9P209 647 aa9.99□□□□□ -0.81
TDP1-202ENST00000393452 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.99□□□□□ -0.81
TDP1-202ENST00000393452 MYH11P35749 1972 aa9.98□□□□□ -0.81
TDP1-202ENST00000393452 SPDYE4A6NLX3 237 aa9.98□□□□□ -0.81
TDP1-202ENST00000393452 RSPH10B2B2RC85 870 aa9.98□□□□□ -0.81
TDP1-202ENST00000393452 CETN3O15182 167 aa9.98□□□□□ -0.81
TDP1-202ENST00000393452 GAS7O60861 476 aa9.98□□□□□ -0.81
TDP1-202ENST00000393452 ZRANB2O95218 330 aaKnown RBP eCLIP9.98□□□□□ -0.81
TDP1-202ENST00000393452 EGFRP00533 1210 aa9.98□□□□□ -0.81
TDP1-202ENST00000393452 RSPH10BP0C881 870 aa9.98□□□□□ -0.81
TDP1-202ENST00000393452 ARP10275 920 aa9.98□□□□□ -0.81
TDP1-202ENST00000393452 ZSCAN20P17040 1043 aaPredicted RBP9.98□□□□□ -0.81
TDP1-202ENST00000393452 GAP43P17677 238 aa9.98□□□□□ -0.81
TDP1-202ENST00000393452 MAPK8IP2Q13387 824 aaPredicted RBP9.98□□□□□ -0.81
TDP1-202ENST00000393452 CTTNQ14247 550 aaKnown RBP9.98□□□□□ -0.81
TDP1-202ENST00000393452 ASTE1Q2TB18 679 aaPredicted RBP9.98□□□□□ -0.81
TDP1-202ENST00000393452 TEX35Q5T0J7 233 aa9.98□□□□□ -0.81
TDP1-202ENST00000393452 RRAGAQ7L523 313 aa9.98□□□□□ -0.81
TDP1-202ENST00000393452 TRAPPC11Q7Z392 1133 aa9.98□□□□□ -0.81
TDP1-202ENST00000393452 FRMD5Q7Z6J6 570 aa9.98□□□□□ -0.81
TDP1-202ENST00000393452 KIAA1328Q86T90 577 aa9.98□□□□□ -0.81
TDP1-202ENST00000393452 SMCR8Q8TEV9 937 aaPredicted RBP9.98□□□□□ -0.81
TDP1-202ENST00000393452 CLEC4DQ8WXI8 215 aa9.98□□□□□ -0.81
TDP1-202ENST00000393452 DYDC2Q96IM9 177 aa9.98□□□□□ -0.81
TDP1-202ENST00000393452 AGBL1Q96MI9 1066 aa9.98□□□□□ -0.81
TDP1-202ENST00000393452 RIT2Q99578 217 aa9.98□□□□□ -0.81
TDP1-202ENST00000393452 TANGO6Q9C0B7 1094 aa9.98□□□□□ -0.81
TDP1-202ENST00000393452 NUCKS1Q9H1E3 243 aaKnown RBP9.98□□□□□ -0.81
TDP1-202ENST00000393452 CCPG1Q9ULG6 757 aa9.98□□□□□ -0.81
TDP1-202ENST00000393452 TFR2Q9UP52 801 aa9.98□□□□□ -0.81
TDP1-202ENST00000393452 PARP14Q460N5 1801 aa9.98□□□□□ -0.81
TDP1-202ENST00000393452 FRMPD4Q14CM0 1322 aa9.98□□□□□ -0.81
TDP1-202ENST00000393452 SSU72P8A0A1W2PR75 194 aa9.97□□□□□ -0.81
TDP1-202ENST00000393452 CTNND1O60716 968 aaKnown RBP9.97□□□□□ -0.81
TDP1-202ENST00000393452 TBCAO75347 108 aaKnown RBP9.97□□□□□ -0.81
TDP1-202ENST00000393452 MYBP10242 640 aa9.97□□□□□ -0.81
TDP1-202ENST00000393452 KIF11P52732 1056 aa9.97□□□□□ -0.81
TDP1-202ENST00000393452 UBXN2AP68543 259 aa9.97□□□□□ -0.81
TDP1-202ENST00000393452 CYP27A1Q02318 531 aa9.97□□□□□ -0.81
TDP1-202ENST00000393452 EPHA7Q15375 998 aa9.97□□□□□ -0.81
TDP1-202ENST00000393452 PAPD7Q5XG87 772 aaKnown RBP9.97□□□□□ -0.81
TDP1-202ENST00000393452 HGSNATQ68CP4 663 aa9.97□□□□□ -0.81
TDP1-202ENST00000393452 SLC30A10Q6XR72 485 aa9.97□□□□□ -0.81
TDP1-202ENST00000393452 KRT26Q7Z3Y9 468 aa9.97□□□□□ -0.81
TDP1-202ENST00000393452 TPH2Q8IWU9 490 aa9.97□□□□□ -0.81
TDP1-202ENST00000393452 PIGOQ8TEQ8 1089 aa9.97□□□□□ -0.81
TDP1-202ENST00000393452 MXRA8Q9BRK3 442 aa9.97□□□□□ -0.81
TDP1-202ENST00000393452 ZNF577Q9BSK1 485 aa9.97□□□□□ -0.81
TDP1-202ENST00000393452 TSGA10Q9BZW7 698 aa9.97□□□□□ -0.81
TDP1-202ENST00000393452 TYW1Q9NV66 732 aaKnown RBP9.97□□□□□ -0.81
TDP1-202ENST00000393452 KCND2Q9NZV8 630 aa9.97□□□□□ -0.81
TDP1-202ENST00000393452 COL20A1Q9P218 1284 aa9.97□□□□□ -0.81
TDP1-202ENST00000393452 MYO6Q9UM54 1294 aa9.97□□□□□ -0.81
TDP1-202ENST00000393452 ASTN1O14525 1302 aa9.97□□□□□ -0.81
TDP1-202ENST00000393452 LTBP3Q9NS15 1303 aa9.97□□□□□ -0.81
TDP1-202ENST00000393452 IPO5O00410 1097 aaKnown RBP9.97□□□□□ -0.81
TDP1-202ENST00000393452 EIF3DO15371 548 aaKnown RBP eCLIP9.97□□□□□ -0.81
TDP1-202ENST00000393452 ITGB5P18084 799 aa9.97□□□□□ -0.81
TDP1-202ENST00000393452 POLD1P28340 1107 aa9.97□□□□□ -0.81
TDP1-202ENST00000393452 EIF4A3P38919 411 aaKnown RBP9.97□□□□□ -0.81
TDP1-202ENST00000393452 ZNF131P52739 623 aa9.97□□□□□ -0.81
TDP1-202ENST00000393452 CBX1P83916 185 aa9.97□□□□□ -0.81
TDP1-202ENST00000393452 KIF5AQ12840 1032 aa9.97□□□□□ -0.81
TDP1-202ENST00000393452 SPA17Q15506 151 aa9.97□□□□□ -0.81
TDP1-202ENST00000393452 NIPA1Q7RTP0 329 aa9.97□□□□□ -0.81
TDP1-202ENST00000393452 SAMD3Q8N6K7 520 aa9.97□□□□□ -0.81
TDP1-202ENST00000393452 UNC45AQ9H3U1 944 aa9.97□□□□□ -0.81
TDP1-202ENST00000393452 SLC38A10Q9HBR0 1119 aa9.97□□□□□ -0.81
TDP1-202ENST00000393452 MAP3K20Q9NYL2 800 aaKnown RBP9.97□□□□□ -0.81
TDP1-202ENST00000393452 ANO9A1A5B4 782 aa9.96□□□□□ -0.81
TDP1-202ENST00000393452 RBAK-RBAKDNI3L0D1 243 aa9.96□□□□□ -0.81
TDP1-202ENST00000393452 NFIBO00712 420 aa9.96□□□□□ -0.81
TDP1-202ENST00000393452 CALUO43852 315 aaPredicted RBP9.96□□□□□ -0.81
TDP1-202ENST00000393452 PRPF6O94906 941 aaKnown RBP9.96□□□□□ -0.81
TDP1-202ENST00000393452 KCNH2Q12809 1159 aa9.96□□□□□ -0.81
TDP1-202ENST00000393452 NFIL3Q16649 462 aa9.96□□□□□ -0.81
TDP1-202ENST00000393452 DPY19L2P1Q6NXN4 242 aa9.96□□□□□ -0.81
TDP1-202ENST00000393452 CACNA2D4Q7Z3S7 1137 aa9.96□□□□□ -0.81
TDP1-202ENST00000393452 MCF2L2Q86YR7 1114 aa9.96□□□□□ -0.81
TDP1-202ENST00000393452 MSANTD4Q8NCY6 345 aa9.96□□□□□ -0.81
TDP1-202ENST00000393452 NACC1Q96RE7 527 aa9.96□□□□□ -0.81
TDP1-202ENST00000393452 FIZ1Q96SL8 496 aa9.96□□□□□ -0.81
TDP1-202ENST00000393452 TEKT3Q9BXF9 490 aa9.96□□□□□ -0.81
TDP1-202ENST00000393452 PARD6BQ9BYG5 372 aa9.96□□□□□ -0.81
TDP1-202ENST00000393452 IFIH1Q9BYX4 1025 aaKnown RBP9.96□□□□□ -0.81
TDP1-202ENST00000393452 EPC1Q9H2F5 836 aa9.96□□□□□ -0.81
TDP1-202ENST00000393452 WRAP73Q9P2S5 460 aaPredicted RBP9.96□□□□□ -0.81
TDP1-202ENST00000393452 SEL1LQ9UBV2 794 aa9.96□□□□□ -0.81
TDP1-202ENST00000393452 SCAF8Q9UPN6 1271 aaKnown RBP9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms