RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 HS1BP3Q53T59 392 aa29.25■■■□□ 2.27
ATPAF1-202ENST00000371937 SLC39A2Q9NP94 309 aa29.25■■■□□ 2.27
ATPAF1-202ENST00000371937 WRAP73Q9P2S5 460 aaPredicted RBP29.25■■■□□ 2.27
ATPAF1-202ENST00000371937 PCDHA10Q9Y5I2 948 aa29.25■■■□□ 2.27
ATPAF1-202ENST00000371937 FRMD3A2A2Y4 597 aa29.24■■■□□ 2.27
ATPAF1-202ENST00000371937 GIT2Q14161 759 aa29.24■■■□□ 2.27
ATPAF1-202ENST00000371937 KIAA0895Q8NCT3 520 aa29.24■■■□□ 2.27
ATPAF1-202ENST00000371937 SLC9A2Q9UBY0 812 aa29.24■■■□□ 2.27
ATPAF1-202ENST00000371937 STRNO43815 780 aa29.24■■■□□ 2.27
ATPAF1-202ENST00000371937 SERPINC1P01008 464 aa29.24■■■□□ 2.27
ATPAF1-202ENST00000371937 SEPT14Q6ZU15 432 aa29.24■■■□□ 2.27
ATPAF1-202ENST00000371937 ABRAQ8N0Z2 381 aa29.24■■■□□ 2.27
ATPAF1-202ENST00000371937 NPHP3-ACAD11A0A0J9YXS1 232 aa29.23■■■□□ 2.27
ATPAF1-202ENST00000371937 BICDL2A1A5D9 508 aa29.23■■■□□ 2.27
ATPAF1-202ENST00000371937 GOLGA6L6A8MZA4 724 aa29.23■■■□□ 2.27
ATPAF1-202ENST00000371937 TGFB3P10600 412 aa29.23■■■□□ 2.27
ATPAF1-202ENST00000371937 PSMC5P62195 406 aa29.23■■■□□ 2.27
ATPAF1-202ENST00000371937 FAM110CQ1W6H9 321 aa29.23■■■□□ 2.27
ATPAF1-202ENST00000371937 FAM26FQ5R3K3 315 aa29.23■■■□□ 2.27
ATPAF1-202ENST00000371937 RINT1Q6NUQ1 792 aa29.23■■■□□ 2.27
ATPAF1-202ENST00000371937 DRC7Q8IY82 874 aa29.23■■■□□ 2.27
ATPAF1-202ENST00000371937 SMC1BQ8NDV3 1235 aa29.23■■■□□ 2.27
ATPAF1-202ENST00000371937 SAMSN1Q9NSI8 373 aaKnown RBP29.23■■■□□ 2.27
ATPAF1-202ENST00000371937 IFNKQ9P0W0 207 aa29.23■■■□□ 2.27
ATPAF1-202ENST00000371937 CBFA2T2O43439 604 aa29.22■■■□□ 2.27
ATPAF1-202ENST00000371937 INHBEP58166 350 aa29.22■■■□□ 2.27
ATPAF1-202ENST00000371937 HERC4Q5GLZ8 1057 aaPredicted RBP29.22■■■□□ 2.27
ATPAF1-202ENST00000371937 C4orf19Q8IY42 314 aa29.22■■■□□ 2.27
ATPAF1-202ENST00000371937 GUF1Q8N442 669 aaKnown RBP29.22■■■□□ 2.27
ATPAF1-202ENST00000371937 HPS3Q969F9 1004 aa29.22■■■□□ 2.27
ATPAF1-202ENST00000371937 REEP2Q9BRK0 252 aa29.22■■■□□ 2.27
ATPAF1-202ENST00000371937 DBR1Q9UK59 544 aaKnown RBP29.22■■■□□ 2.27
ATPAF1-202ENST00000371937 IVNS1ABPQ9Y6Y0 642 aa29.22■■■□□ 2.27
ATPAF1-202ENST00000371937 LOXHD1Q8IVV2 1947 aa29.22■■■□□ 2.27
ATPAF1-202ENST00000371937 DKC1O60832 514 aaKnown RBP eCLIP29.22■■■□□ 2.27
ATPAF1-202ENST00000371937 CCNE1P24864 410 aa29.22■■■□□ 2.27
ATPAF1-202ENST00000371937 RAD51AP2Q09MP3 1159 aa29.22■■■□□ 2.27
ATPAF1-202ENST00000371937 FGD4Q96M96 766 aa29.22■■■□□ 2.27
ATPAF1-202ENST00000371937 RUSC1Q9BVN2 902 aa29.22■■■□□ 2.27
ATPAF1-202ENST00000371937 TLL2Q9Y6L7 1015 aa29.22■■■□□ 2.27
ATPAF1-202ENST00000371937 ARHGEF35A5YM69 484 aa29.21■■■□□ 2.27
ATPAF1-202ENST00000371937 ZBTB39O15060 712 aa29.21■■■□□ 2.27
ATPAF1-202ENST00000371937 PSAPP07602 524 aa29.21■■■□□ 2.27
ATPAF1-202ENST00000371937 SLC10A3P09131 477 aa29.21■■■□□ 2.27
ATPAF1-202ENST00000371937 CDKAL1Q5VV42 579 aa29.21■■■□□ 2.27
ATPAF1-202ENST00000371937 KCNV1Q6PIU1 500 aa29.21■■■□□ 2.27
ATPAF1-202ENST00000371937 C1orf186Q6ZWK4 172 aa29.21■■■□□ 2.27
ATPAF1-202ENST00000371937 P2RX5Q93086 422 aa29.21■■■□□ 2.27
ATPAF1-202ENST00000371937 XPO4Q9C0E2 1151 aaKnown RBP29.21■■■□□ 2.27
ATPAF1-202ENST00000371937 ASB14A6NK59 587 aa29.2■■■□□ 2.27
ATPAF1-202ENST00000371937 TBCAO75347 108 aaKnown RBP29.2■■■□□ 2.27
ATPAF1-202ENST00000371937 UBASH3AP57075 661 aa29.2■■■□□ 2.27
ATPAF1-202ENST00000371937 CACNB1Q02641 598 aaPredicted RBP29.2■■■□□ 2.27
ATPAF1-202ENST00000371937 MORC4Q8TE76 937 aa29.2■■■□□ 2.27
ATPAF1-202ENST00000371937 COL4A3BPQ9Y5P4 624 aa29.2■■■□□ 2.27
ATPAF1-202ENST00000371937 KIF20AO95235 890 aa29.2■■■□□ 2.26
ATPAF1-202ENST00000371937 SP2Q02086 613 aa29.2■■■□□ 2.26
ATPAF1-202ENST00000371937 CCDC102AQ96A19 550 aa29.2■■■□□ 2.26
ATPAF1-202ENST00000371937 ZHX3Q9H4I2 956 aa29.2■■■□□ 2.26
ATPAF1-202ENST00000371937 ZNFX1Q9P2E3 1918 aaKnown RBP29.19■■■□□ 2.26
ATPAF1-202ENST00000371937 TPM3P06753 285 aa29.19■■■□□ 2.26
ATPAF1-202ENST00000371937 NEDD9Q14511 834 aa29.19■■■□□ 2.26
ATPAF1-202ENST00000371937 MYOCDQ8IZQ8 938 aa29.19■■■□□ 2.26
ATPAF1-202ENST00000371937 SPC24Q8NBT2 197 aa29.19■■■□□ 2.26
ATPAF1-202ENST00000371937 ATP6V0A1Q93050 837 aa29.19■■■□□ 2.26
ATPAF1-202ENST00000371937 KIF3CO14782 793 aa29.18■■■□□ 2.26
ATPAF1-202ENST00000371937 GAP43P17677 238 aa29.18■■■□□ 2.26
ATPAF1-202ENST00000371937 ADORA2AP29274 412 aa29.18■■■□□ 2.26
ATPAF1-202ENST00000371937 MAPK4P31152 587 aa29.18■■■□□ 2.26
ATPAF1-202ENST00000371937 YWHABP31946 246 aaKnown RBP29.18■■■□□ 2.26
ATPAF1-202ENST00000371937 ACTR2P61160 394 aa29.18■■■□□ 2.26
ATPAF1-202ENST00000371937 SPAG1Q07617 926 aa29.18■■■□□ 2.26
ATPAF1-202ENST00000371937 HSP90AA4PQ58FG1 418 aa29.18■■■□□ 2.26
ATPAF1-202ENST00000371937 CENPPQ6IPU0 288 aa29.18■■■□□ 2.26
ATPAF1-202ENST00000371937 TTI2Q6NXR4 508 aa29.18■■■□□ 2.26
ATPAF1-202ENST00000371937 MIS18BP1Q6P0N0 1132 aa29.18■■■□□ 2.26
ATPAF1-202ENST00000371937 NOC3LQ8WTT2 800 aaKnown RBP29.18■■■□□ 2.26
ATPAF1-202ENST00000371937 PCDHA2Q9Y5H9 948 aa29.18■■■□□ 2.26
ATPAF1-202ENST00000371937 IGF2BP3O00425 579 aaKnown RBP eCLIP29.17■■■□□ 2.26
ATPAF1-202ENST00000371937 CYFIP1Q7L576 1253 aa29.17■■■□□ 2.26
ATPAF1-202ENST00000371937 TRIM47Q96LD4 638 aa29.17■■■□□ 2.26
ATPAF1-202ENST00000371937 CCDC43Q96MW1 224 aaKnown RBP29.17■■■□□ 2.26
ATPAF1-202ENST00000371937 CTAGE1Q96RT6 745 aa29.17■■■□□ 2.26
ATPAF1-202ENST00000371937 ODF2LQ9ULJ1 636 aa29.17■■■□□ 2.26
ATPAF1-202ENST00000371937 TRIM49BA6NDI0 452 aa29.17■■■□□ 2.26
ATPAF1-202ENST00000371937 COBLO75128 1261 aa29.17■■■□□ 2.26
ATPAF1-202ENST00000371937 UGCGQ16739 394 aa29.17■■■□□ 2.26
ATPAF1-202ENST00000371937 ZNF792Q3KQV3 632 aa29.17■■■□□ 2.26
ATPAF1-202ENST00000371937 ABHD15Q6UXT9 468 aa29.17■■■□□ 2.26
ATPAF1-202ENST00000371937 BCAS3Q9H6U6 928 aa29.17■■■□□ 2.26
ATPAF1-202ENST00000371937 ANKEF1Q9NU02 776 aa29.17■■■□□ 2.26
ATPAF1-202ENST00000371937 LRRC37A2A6NM11 1700 aa29.17■■■□□ 2.26
ATPAF1-202ENST00000371937 UBA1P22314 1058 aaKnown RBP29.16■■■□□ 2.26
ATPAF1-202ENST00000371937 GUCY2CP25092 1073 aa29.16■■■□□ 2.26
ATPAF1-202ENST00000371937 PMS1P54277 932 aaKnown RBP29.16■■■□□ 2.26
ATPAF1-202ENST00000371937 FOXR2Q6PJQ5 311 aa29.16■■■□□ 2.26
ATPAF1-202ENST00000371937 GPR142Q7Z601 462 aa29.16■■■□□ 2.26
ATPAF1-202ENST00000371937 ANKRD20A12PQ8NF67 263 aa29.16■■■□□ 2.26
ATPAF1-202ENST00000371937 THAP9Q9H5L6 903 aa29.16■■■□□ 2.26
ATPAF1-202ENST00000371937 GABBR1Q9UBS5 961 aa29.16■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms