RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 NAPAP54920 295 aa11.71□□□□□ -0.53
COL5A1-202ENST00000371820 CHMP4BP1P59074 171 aa11.71□□□□□ -0.53
COL5A1-202ENST00000371820 AKAP17AQ02040 695 aaKnown RBP11.71□□□□□ -0.53
COL5A1-202ENST00000371820 RESTQ13127 1097 aa11.71□□□□□ -0.53
COL5A1-202ENST00000371820 COL9A3Q14050 684 aaPredicted RBP11.71□□□□□ -0.53
COL5A1-202ENST00000371820 ADGRE1Q14246 886 aa11.71□□□□□ -0.53
COL5A1-202ENST00000371820 CPLX2Q6PUV4 134 aaKnown RBP11.71□□□□□ -0.53
COL5A1-202ENST00000371820 SARM1Q6SZW1 724 aa11.71□□□□□ -0.53
COL5A1-202ENST00000371820 BRAPQ7Z569 592 aa11.71□□□□□ -0.53
COL5A1-202ENST00000371820 C7orf31Q8N865 590 aa11.71□□□□□ -0.53
COL5A1-202ENST00000371820 CAGE1Q8TC20 777 aa11.71□□□□□ -0.53
COL5A1-202ENST00000371820 KIAA1524Q8TCG1 905 aa11.71□□□□□ -0.53
COL5A1-202ENST00000371820 CCDC12Q8WUD4 166 aaPredicted RBP11.71□□□□□ -0.53
COL5A1-202ENST00000371820 SENP7Q9BQF6 1050 aa11.71□□□□□ -0.53
COL5A1-202ENST00000371820 SLC28A3Q9HAS3 691 aa11.71□□□□□ -0.53
COL5A1-202ENST00000371820 PRDM6Q9NQX0 595 aa11.71□□□□□ -0.53
COL5A1-202ENST00000371820 DACT1Q9NYF0 836 aa11.71□□□□□ -0.53
COL5A1-202ENST00000371820 SLC4A7Q9Y6M7 1214 aa11.71□□□□□ -0.53
COL5A1-202ENST00000371820 CHD7Q9P2D1 2997 aa11.71□□□□□ -0.54
COL5A1-202ENST00000371820 SCN5AQ14524 2016 aa11.7□□□□□ -0.54
COL5A1-202ENST00000371820 MYO9BQ13459 2157 aa11.7□□□□□ -0.54
COL5A1-202ENST00000371820 BAZ2BQ9UIF8 2168 aaKnown RBP11.7□□□□□ -0.54
COL5A1-202ENST00000371820 A0A1W2PQ27 194 aa11.7□□□□□ -0.54
COL5A1-202ENST00000371820 A0A1W2PQ64 194 aa11.7□□□□□ -0.54
COL5A1-202ENST00000371820 A0A1W2PQD8 194 aa11.7□□□□□ -0.54
COL5A1-202ENST00000371820 SPATA31C2B4DYI2 1134 aa11.7□□□□□ -0.54
COL5A1-202ENST00000371820 MAFGO15525 162 aa11.7□□□□□ -0.54
COL5A1-202ENST00000371820 KINO60870 393 aaKnown RBP11.7□□□□□ -0.54
COL5A1-202ENST00000371820 RGS20O76081 388 aa11.7□□□□□ -0.54
COL5A1-202ENST00000371820 PARNO95453 639 aaKnown RBP11.7□□□□□ -0.54
COL5A1-202ENST00000371820 FOSP01100 380 aaPredicted RBP11.7□□□□□ -0.54
COL5A1-202ENST00000371820 ACTN1P12814 892 aa11.7□□□□□ -0.54
COL5A1-202ENST00000371820 PSEN2P49810 448 aa11.7□□□□□ -0.54
COL5A1-202ENST00000371820 ZNF165P49910 485 aa11.7□□□□□ -0.54
COL5A1-202ENST00000371820 ADCY7P51828 1080 aa11.7□□□□□ -0.54
COL5A1-202ENST00000371820 RABGGTBP53611 331 aa11.7□□□□□ -0.54
COL5A1-202ENST00000371820 MRPS9P82933 396 aaKnown RBP11.7□□□□□ -0.54
COL5A1-202ENST00000371820 PLCB2Q00722 1185 aa11.7□□□□□ -0.54
COL5A1-202ENST00000371820 AP3B2Q13367 1082 aa11.7□□□□□ -0.54
COL5A1-202ENST00000371820 MFSD10Q14728 455 aa11.7□□□□□ -0.54
COL5A1-202ENST00000371820 STX1AQ16623 288 aa11.7□□□□□ -0.54
COL5A1-202ENST00000371820 PTGISQ16647 500 aa11.7□□□□□ -0.54
COL5A1-202ENST00000371820 MCTP2Q6DN12 878 aa11.7□□□□□ -0.54
COL5A1-202ENST00000371820 METTL7BQ6UX53 244 aa11.7□□□□□ -0.54
COL5A1-202ENST00000371820 DRC7Q8IY82 874 aa11.7□□□□□ -0.54
COL5A1-202ENST00000371820 BRF1Q92994 677 aa11.7□□□□□ -0.54
COL5A1-202ENST00000371820 GPRASP2Q96D09 838 aa11.7□□□□□ -0.54
COL5A1-202ENST00000371820 PCDHA11Q9Y5I1 949 aa11.7□□□□□ -0.54
COL5A1-202ENST00000371820 hCG_1642624A0A1W2PR95 340 aa11.69□□□□□ -0.54
COL5A1-202ENST00000371820 ZBBXA8MT70 800 aa11.69□□□□□ -0.54
COL5A1-202ENST00000371820 BECN2A8MW95 431 aa11.69□□□□□ -0.54
COL5A1-202ENST00000371820 HAS3O00219 553 aa11.69□□□□□ -0.54
COL5A1-202ENST00000371820 CDKL5O76039 1030 aa11.69□□□□□ -0.54
COL5A1-202ENST00000371820 ATP2A2P16615 1042 aaKnown RBP11.69□□□□□ -0.54
COL5A1-202ENST00000371820 APOBRQ0VD83 1088 aa11.69□□□□□ -0.54
COL5A1-202ENST00000371820 ST3GAL1Q11201 340 aa11.69□□□□□ -0.54
COL5A1-202ENST00000371820 KIAA0753Q2KHM9 967 aa11.69□□□□□ -0.54
COL5A1-202ENST00000371820 HSDL1Q3SXM5 330 aa11.69□□□□□ -0.54
COL5A1-202ENST00000371820 PPP2R2DQ66LE6 453 aa11.69□□□□□ -0.54
COL5A1-202ENST00000371820 WWC2Q6AWC2 1192 aa11.69□□□□□ -0.54
COL5A1-202ENST00000371820 PDCL2Q8N4E4 241 aa11.69□□□□□ -0.54
COL5A1-202ENST00000371820 KCNG4Q8TDN1 519 aa11.69□□□□□ -0.54
COL5A1-202ENST00000371820 AFAP1L1Q8TED9 768 aa11.69□□□□□ -0.54
COL5A1-202ENST00000371820 PPM1EQ8WY54 764 aa11.69□□□□□ -0.54
COL5A1-202ENST00000371820 GPKOWQ92917 476 aaPredicted RBP eCLIP11.69□□□□□ -0.54
COL5A1-202ENST00000371820 MRFAP1L1Q96HT8 127 aa11.69□□□□□ -0.54
COL5A1-202ENST00000371820 CHAMP1Q96JM3 812 aa11.69□□□□□ -0.54
COL5A1-202ENST00000371820 LARP6Q9BRS8 491 aaKnown RBP11.69□□□□□ -0.54
COL5A1-202ENST00000371820 ALG1Q9BT22 464 aa11.69□□□□□ -0.54
COL5A1-202ENST00000371820 TRIM5Q9C035 493 aa11.69□□□□□ -0.54
COL5A1-202ENST00000371820 RIC8AQ9NPQ8 531 aa11.69□□□□□ -0.54
COL5A1-202ENST00000371820 BARHL2Q9NY43 387 aa11.69□□□□□ -0.54
COL5A1-202ENST00000371820 RTEL1Q9NZ71 1219 aa11.69□□□□□ -0.54
COL5A1-202ENST00000371820 THEGQ9P2T0 379 aa11.69□□□□□ -0.54
COL5A1-202ENST00000371820 GTF2IRD1Q9UHL9 959 aa11.69□□□□□ -0.54
COL5A1-202ENST00000371820 ZNF215Q9UL58 517 aaPredicted RBP11.69□□□□□ -0.54
COL5A1-202ENST00000371820 PCDHA6Q9UN73 950 aa11.69□□□□□ -0.54
COL5A1-202ENST00000371820 PCDHA8Q9Y5H6 950 aa11.69□□□□□ -0.54
COL5A1-202ENST00000371820 V9GY48 417 aaPredicted RBP11.69□□□□□ -0.54
COL5A1-202ENST00000371820 MYH7BA7E2Y1 1941 aa11.68□□□□□ -0.54
COL5A1-202ENST00000371820 MUC3AQ02505 3323 aa11.68□□□□□ -0.54
COL5A1-202ENST00000371820 SMCO2A6NFE2 343 aa11.68□□□□□ -0.54
COL5A1-202ENST00000371820 SMTNL1A8MU46 457 aa11.68□□□□□ -0.54
COL5A1-202ENST00000371820 H3BRB1 525 aa11.68□□□□□ -0.54
COL5A1-202ENST00000371820 YEATS4O95619 227 aa11.68□□□□□ -0.54
COL5A1-202ENST00000371820 ZNF286BP0CG31 522 aa11.68□□□□□ -0.54
COL5A1-202ENST00000371820 GNAT1P11488 350 aa11.68□□□□□ -0.54
COL5A1-202ENST00000371820 SCG2P13521 617 aa11.68□□□□□ -0.54
COL5A1-202ENST00000371820 MYOGP15173 224 aa11.68□□□□□ -0.54
COL5A1-202ENST00000371820 CDC27P30260 824 aa11.68□□□□□ -0.54
COL5A1-202ENST00000371820 GSDMDP57764 484 aa11.68□□□□□ -0.54
COL5A1-202ENST00000371820 SP2Q02086 613 aa11.68□□□□□ -0.54
COL5A1-202ENST00000371820 FUT2Q10981 343 aa11.68□□□□□ -0.54
COL5A1-202ENST00000371820 MTMR1Q13613 665 aa11.68□□□□□ -0.54
COL5A1-202ENST00000371820 UBE2SQ16763 222 aa11.68□□□□□ -0.54
COL5A1-202ENST00000371820 PFKFB3Q16875 520 aaPredicted RBP11.68□□□□□ -0.54
COL5A1-202ENST00000371820 ADALQ6DHV7 355 aa11.68□□□□□ -0.54
COL5A1-202ENST00000371820 CYFIP1Q7L576 1253 aa11.68□□□□□ -0.54
COL5A1-202ENST00000371820 DEFB128Q7Z7B8 93 aa11.68□□□□□ -0.54
COL5A1-202ENST00000371820 NSUN7Q8NE18 718 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms