RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 ZNF792Q3KQV3 632 aa25.82■■□□□ 1.72
SDF4-202ENST00000360001 GPR142Q7Z601 462 aa25.82■■□□□ 1.72
SDF4-202ENST00000360001 SLC9A2Q9UBY0 812 aa25.82■■□□□ 1.72
SDF4-202ENST00000360001 CTNND2Q9UQB3 1225 aa25.82■■□□□ 1.72
SDF4-202ENST00000360001 MAPK8IP1Q9UQF2 711 aa25.82■■□□□ 1.72
SDF4-202ENST00000360001 TELO2Q9Y4R8 837 aa25.82■■□□□ 1.72
SDF4-202ENST00000360001 IVNS1ABPQ9Y6Y0 642 aa25.82■■□□□ 1.72
SDF4-202ENST00000360001 LOXHD1Q8IVV2 1947 aa25.81■■□□□ 1.72
SDF4-202ENST00000360001 TPM4P67936 248 aa25.81■■□□□ 1.72
SDF4-202ENST00000360001 UGCGQ16739 394 aa25.81■■□□□ 1.72
SDF4-202ENST00000360001 SMAP1Q8IYB5 467 aaPredicted RBP25.81■■□□□ 1.72
SDF4-202ENST00000360001 KIAA0895Q8NCT3 520 aa25.81■■□□□ 1.72
SDF4-202ENST00000360001 FANCLQ9NW38 375 aa25.81■■□□□ 1.72
SDF4-202ENST00000360001 PCDHA10Q9Y5I2 948 aa25.81■■□□□ 1.72
SDF4-202ENST00000360001 SYNRGQ9UMZ2 1314 aa25.81■■□□□ 1.72
SDF4-202ENST00000360001 WDR81Q562E7 1941 aa25.8■■□□□ 1.72
SDF4-202ENST00000360001 LYPLA2O95372 231 aa25.8■■□□□ 1.72
SDF4-202ENST00000360001 MAPK4P31152 587 aa25.8■■□□□ 1.72
SDF4-202ENST00000360001 EEPD1Q7L9B9 569 aa25.8■■□□□ 1.72
SDF4-202ENST00000360001 RUSC1Q9BVN2 902 aa25.8■■□□□ 1.72
SDF4-202ENST00000360001 PANK4Q9NVE7 773 aa25.8■■□□□ 1.72
SDF4-202ENST00000360001 NFE2L3Q9Y4A8 694 aa25.8■■□□□ 1.72
SDF4-202ENST00000360001 FRMD3A2A2Y4 597 aa25.8■■□□□ 1.72
SDF4-202ENST00000360001 UBA1P22314 1058 aaKnown RBP25.8■■□□□ 1.72
SDF4-202ENST00000360001 STX17P56962 302 aa25.8■■□□□ 1.72
SDF4-202ENST00000360001 CACNB1Q02641 598 aaPredicted RBP25.8■■□□□ 1.72
SDF4-202ENST00000360001 RAD51AP2Q09MP3 1159 aa25.8■■□□□ 1.72
SDF4-202ENST00000360001 COASYQ13057 564 aa25.8■■□□□ 1.72
SDF4-202ENST00000360001 GIT2Q14161 759 aa25.8■■□□□ 1.72
SDF4-202ENST00000360001 GRB14Q14449 540 aa25.8■■□□□ 1.72
SDF4-202ENST00000360001 COBLL1Q53SF7 1204 aa25.8■■□□□ 1.72
SDF4-202ENST00000360001 RINT1Q6NUQ1 792 aa25.8■■□□□ 1.72
SDF4-202ENST00000360001 RWDD2AQ9UIY3 292 aa25.8■■□□□ 1.72
SDF4-202ENST00000360001 KRT18P05783 430 aaKnown RBP25.79■■□□□ 1.72
SDF4-202ENST00000360001 TGFB3P10600 412 aa25.79■■□□□ 1.72
SDF4-202ENST00000360001 SREBF2Q12772 1141 aa25.79■■□□□ 1.72
SDF4-202ENST00000360001 PAK1Q13153 545 aa25.79■■□□□ 1.72
SDF4-202ENST00000360001 CYFIP1Q7L576 1253 aa25.79■■□□□ 1.72
SDF4-202ENST00000360001 NELFBQ8WX92 580 aa25.79■■□□□ 1.72
SDF4-202ENST00000360001 REEP2Q9BRK0 252 aa25.79■■□□□ 1.72
SDF4-202ENST00000360001 SLC39A2Q9NP94 309 aa25.79■■□□□ 1.72
SDF4-202ENST00000360001 ASB14A6NK59 587 aa25.78■■□□□ 1.72
SDF4-202ENST00000360001 SORBS3O60504 671 aa25.78■■□□□ 1.72
SDF4-202ENST00000360001 ACTR2P61160 394 aa25.78■■□□□ 1.72
SDF4-202ENST00000360001 PSMC5P62195 406 aa25.78■■□□□ 1.72
SDF4-202ENST00000360001 PSMD2Q13200 908 aa25.78■■□□□ 1.72
SDF4-202ENST00000360001 PLEKHH3Q7Z736 793 aa25.78■■□□□ 1.72
SDF4-202ENST00000360001 CCDC65Q8IXS2 484 aa25.78■■□□□ 1.72
SDF4-202ENST00000360001 C4orf19Q8IY42 314 aa25.78■■□□□ 1.72
SDF4-202ENST00000360001 ZIC5Q96T25 663 aa25.78■■□□□ 1.72
SDF4-202ENST00000360001 STIM1Q13586 685 aa25.78■■□□□ 1.72
SDF4-202ENST00000360001 SPATA1Q5VX52 437 aa25.78■■□□□ 1.72
SDF4-202ENST00000360001 C1orf186Q6ZWK4 172 aa25.78■■□□□ 1.72
SDF4-202ENST00000360001 TRIM5Q9C035 493 aa25.78■■□□□ 1.72
SDF4-202ENST00000360001 TLR2O60603 784 aa25.77■■□□□ 1.72
SDF4-202ENST00000360001 ATP1A3P13637 1013 aa25.77■■□□□ 1.72
SDF4-202ENST00000360001 ZNF75DP51815 510 aa25.77■■□□□ 1.72
SDF4-202ENST00000360001 SP4Q02446 784 aa25.77■■□□□ 1.72
SDF4-202ENST00000360001 C17orf99Q6UX52 265 aa25.77■■□□□ 1.72
SDF4-202ENST00000360001 ABHD15Q6UXT9 468 aa25.77■■□□□ 1.72
SDF4-202ENST00000360001 FBXO16Q8IX29 292 aaPredicted RBP25.77■■□□□ 1.72
SDF4-202ENST00000360001 DBR1Q9UK59 544 aaKnown RBP25.77■■□□□ 1.72
SDF4-202ENST00000360001 ZNF236Q9UL36 1845 aa25.77■■□□□ 1.72
SDF4-202ENST00000360001 PSAPP07602 524 aa25.76■■□□□ 1.72
SDF4-202ENST00000360001 ZNF18P17022 549 aa25.76■■□□□ 1.72
SDF4-202ENST00000360001 TM4SF4P48230 202 aa25.76■■□□□ 1.72
SDF4-202ENST00000360001 ARMCX2Q7L311 632 aa25.76■■□□□ 1.72
SDF4-202ENST00000360001 ZNF467Q7Z7K2 595 aaPredicted RBP25.76■■□□□ 1.72
SDF4-202ENST00000360001 PCDHA2Q9Y5H9 948 aa25.76■■□□□ 1.72
SDF4-202ENST00000360001 ARIH2O95376 493 aa25.76■■□□□ 1.71
SDF4-202ENST00000360001 DHTKD1Q96HY7 919 aaPredicted RBP25.76■■□□□ 1.71
SDF4-202ENST00000360001 GABBR1Q9UBS5 961 aa25.76■■□□□ 1.71
SDF4-202ENST00000360001 DDX41Q9UJV9 622 aaKnown RBP25.76■■□□□ 1.71
SDF4-202ENST00000360001 PSMA7O14818 248 aa25.75■■□□□ 1.71
SDF4-202ENST00000360001 FARP2O94887 1054 aaPredicted RBP25.75■■□□□ 1.71
SDF4-202ENST00000360001 YWHABP31946 246 aaKnown RBP25.75■■□□□ 1.71
SDF4-202ENST00000360001 PPP1R2P41236 205 aa25.75■■□□□ 1.71
SDF4-202ENST00000360001 NEDD9Q14511 834 aa25.75■■□□□ 1.71
SDF4-202ENST00000360001 LY6KQ17RY6 165 aa25.75■■□□□ 1.71
SDF4-202ENST00000360001 FAM26FQ5R3K3 315 aa25.75■■□□□ 1.71
SDF4-202ENST00000360001 CYP4F22Q6NT55 531 aa25.75■■□□□ 1.71
SDF4-202ENST00000360001 KCNV1Q6PIU1 500 aa25.75■■□□□ 1.71
SDF4-202ENST00000360001 SAMSN1Q9NSI8 373 aaKnown RBP25.75■■□□□ 1.71
SDF4-202ENST00000360001 KCND2Q9NZV8 630 aa25.75■■□□□ 1.71
SDF4-202ENST00000360001 SYNGAP1Q96PV0 1343 aa25.75■■□□□ 1.71
SDF4-202ENST00000360001 ARHGEF35A5YM69 484 aa25.75■■□□□ 1.71
SDF4-202ENST00000360001 SLC15A5A6NIM6 579 aa25.75■■□□□ 1.71
SDF4-202ENST00000360001 ATG7O95352 703 aa25.75■■□□□ 1.71
SDF4-202ENST00000360001 SUPT20HL2P0C7V6 817 aa25.75■■□□□ 1.71
SDF4-202ENST00000360001 RARRES1P49788 294 aa25.75■■□□□ 1.71
SDF4-202ENST00000360001 HERC4Q5GLZ8 1057 aaPredicted RBP25.75■■□□□ 1.71
SDF4-202ENST00000360001 CCDC60Q8IWA6 550 aaPredicted RBP25.75■■□□□ 1.71
SDF4-202ENST00000360001 GLIS3Q8NEA6 775 aa25.75■■□□□ 1.71
SDF4-202ENST00000360001 ZFYVE28Q9HCC9 887 aa25.75■■□□□ 1.71
SDF4-202ENST00000360001 RSPH10B2B2RC85 870 aa25.74■■□□□ 1.71
SDF4-202ENST00000360001 ZNF862O60290 1169 aa25.74■■□□□ 1.71
SDF4-202ENST00000360001 RSPH10BP0C881 870 aa25.74■■□□□ 1.71
SDF4-202ENST00000360001 PMS1P54277 932 aaKnown RBP25.74■■□□□ 1.71
SDF4-202ENST00000360001 SWSAP1Q6NVH7 229 aa25.74■■□□□ 1.71
SDF4-202ENST00000360001 MIS18BP1Q6P0N0 1132 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms