RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 GPBP1Q86WP2 473 aa17.4■□□□□ 0.38
CTSA-202ENST00000354880 PIGOQ8TEQ8 1089 aa17.4■□□□□ 0.38
CTSA-202ENST00000354880 MAML3Q96JK9 1138 aa17.4■□□□□ 0.38
CTSA-202ENST00000354880 BPIFA3Q9BQP9 254 aa17.4■□□□□ 0.38
CTSA-202ENST00000354880 BHMT2Q9H2M3 363 aa17.4■□□□□ 0.38
CTSA-202ENST00000354880 PVALEFA0A1B0GWK0 134 aa17.4■□□□□ 0.38
CTSA-202ENST00000354880 ECM2O94769 699 aaPredicted RBP17.4■□□□□ 0.38
CTSA-202ENST00000354880 RHOBTB3O94955 611 aa17.4■□□□□ 0.38
CTSA-202ENST00000354880 CYP11B2P19099 503 aa17.4■□□□□ 0.38
CTSA-202ENST00000354880 ACTR2P61160 394 aa17.4■□□□□ 0.38
CTSA-202ENST00000354880 IQCB1Q15051 598 aa17.4■□□□□ 0.38
CTSA-202ENST00000354880 ZNF658Q5TYW1 1059 aaPredicted RBP17.4■□□□□ 0.38
CTSA-202ENST00000354880 LOXHD1Q8IVV2 1947 aa17.39■□□□□ 0.37
CTSA-202ENST00000354880 BECN2A8MW95 431 aa17.39■□□□□ 0.37
CTSA-202ENST00000354880 SORBS3O60504 671 aa17.39■□□□□ 0.37
CTSA-202ENST00000354880 LYPLA2O95372 231 aa17.39■□□□□ 0.37
CTSA-202ENST00000354880 PSAPP07602 524 aa17.39■□□□□ 0.37
CTSA-202ENST00000354880 PSMC5P62195 406 aa17.39■□□□□ 0.37
CTSA-202ENST00000354880 SP4Q02446 784 aa17.39■□□□□ 0.37
CTSA-202ENST00000354880 MAP2K5Q13163 448 aa17.39■□□□□ 0.37
CTSA-202ENST00000354880 LY6KQ17RY6 165 aa17.39■□□□□ 0.37
CTSA-202ENST00000354880 UNC13DQ70J99 1090 aa17.39■□□□□ 0.37
CTSA-202ENST00000354880 DNAJC19Q96DA6 116 aa17.39■□□□□ 0.37
CTSA-202ENST00000354880 VTA1Q9NP79 307 aa17.39■□□□□ 0.37
CTSA-202ENST00000354880 EXOC1Q9NV70 894 aa17.39■□□□□ 0.37
CTSA-202ENST00000354880 DDX41Q9UJV9 622 aaKnown RBP17.39■□□□□ 0.37
CTSA-202ENST00000354880 ZBTB39O15060 712 aa17.38■□□□□ 0.37
CTSA-202ENST00000354880 FARP2O94887 1054 aaPredicted RBP17.38■□□□□ 0.37
CTSA-202ENST00000354880 ARIH2O95376 493 aa17.38■□□□□ 0.37
CTSA-202ENST00000354880 METTL7BQ6UX53 244 aa17.38■□□□□ 0.37
CTSA-202ENST00000354880 ABHD15Q6UXT9 468 aa17.38■□□□□ 0.37
CTSA-202ENST00000354880 C4orf19Q8IY42 314 aa17.38■□□□□ 0.37
CTSA-202ENST00000354880 NPLOC4Q8TAT6 608 aa17.38■□□□□ 0.37
CTSA-202ENST00000354880 SCFD2Q8WU76 684 aa17.38■□□□□ 0.37
CTSA-202ENST00000354880 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.38■□□□□ 0.37
CTSA-202ENST00000354880 WDR81Q562E7 1941 aa17.38■□□□□ 0.37
CTSA-202ENST00000354880 GGPS1O95749 300 aa17.37■□□□□ 0.37
CTSA-202ENST00000354880 IDEP14735 1019 aa17.37■□□□□ 0.37
CTSA-202ENST00000354880 DEKP35659 375 aaKnown RBP17.37■□□□□ 0.37
CTSA-202ENST00000354880 TTLL4Q14679 1199 aa17.37■□□□□ 0.37
CTSA-202ENST00000354880 UGCGQ16739 394 aa17.37■□□□□ 0.37
CTSA-202ENST00000354880 ARSHQ5FYA8 562 aa17.37■□□□□ 0.37
CTSA-202ENST00000354880 CT47A1Q5JQC4 288 aaPredicted RBP17.37■□□□□ 0.37
CTSA-202ENST00000354880 MIS18BP1Q6P0N0 1132 aa17.37■□□□□ 0.37
CTSA-202ENST00000354880 CCDC62Q6P9F0 684 aa17.37■□□□□ 0.37
CTSA-202ENST00000354880 DHX40Q8IX18 779 aaKnown RBP17.37■□□□□ 0.37
CTSA-202ENST00000354880 SMYD4Q8IYR2 804 aaPredicted RBP17.37■□□□□ 0.37
CTSA-202ENST00000354880 MSL3Q8N5Y2 521 aaKnown RBP17.37■□□□□ 0.37
CTSA-202ENST00000354880 AOPEPQ8N6M6 819 aa17.37■□□□□ 0.37
CTSA-202ENST00000354880 TINF2Q9BSI4 451 aa17.37■□□□□ 0.37
CTSA-202ENST00000354880 TELO2Q9Y4R8 837 aa17.37■□□□□ 0.37
CTSA-202ENST00000354880 SYNGAP1Q96PV0 1343 aa17.37■□□□□ 0.37
CTSA-202ENST00000354880 TNPO2O14787 897 aaKnown RBP17.37■□□□□ 0.37
CTSA-202ENST00000354880 ATG7O95352 703 aa17.37■□□□□ 0.37
CTSA-202ENST00000354880 SNAI1O95863 264 aaPredicted RBP17.37■□□□□ 0.37
CTSA-202ENST00000354880 KRT18P05783 430 aaKnown RBP17.37■□□□□ 0.37
CTSA-202ENST00000354880 HOXC6P09630 235 aa17.37■□□□□ 0.37
CTSA-202ENST00000354880 SUPT20HL2P0C7V6 817 aa17.37■□□□□ 0.37
CTSA-202ENST00000354880 ATP6V0A1Q93050 837 aa17.37■□□□□ 0.37
CTSA-202ENST00000354880 GTPBP4Q9BZE4 634 aaKnown RBP17.37■□□□□ 0.37
CTSA-202ENST00000354880 MLXIPQ9HAP2 919 aa17.37■□□□□ 0.37
CTSA-202ENST00000354880 PDGFCQ9NRA1 345 aa17.37■□□□□ 0.37
CTSA-202ENST00000354880 GABBR1Q9UBS5 961 aa17.37■□□□□ 0.37
CTSA-202ENST00000354880 GOLGA6L19H0YKK7 550 aa17.36■□□□□ 0.37
CTSA-202ENST00000354880 DKC1O60832 514 aaKnown RBP eCLIP17.36■□□□□ 0.37
CTSA-202ENST00000354880 TXNP10599 105 aaKnown RBP17.36■□□□□ 0.37
CTSA-202ENST00000354880 YWHABP31946 246 aaKnown RBP17.36■□□□□ 0.37
CTSA-202ENST00000354880 CELF3Q5SZQ8 465 aaKnown RBP17.36■□□□□ 0.37
CTSA-202ENST00000354880 RINT1Q6NUQ1 792 aa17.36■□□□□ 0.37
CTSA-202ENST00000354880 SWSAP1Q6NVH7 229 aa17.36■□□□□ 0.37
CTSA-202ENST00000354880 TAPT1Q6NXT6 567 aa17.36■□□□□ 0.37
CTSA-202ENST00000354880 CCDC60Q8IWA6 550 aaPredicted RBP17.36■□□□□ 0.37
CTSA-202ENST00000354880 SOCS4Q8WXH5 440 aa17.36■□□□□ 0.37
CTSA-202ENST00000354880 USP6NLQ92738 828 aa17.36■□□□□ 0.37
CTSA-202ENST00000354880 KATNBL1Q9H079 304 aa17.36■□□□□ 0.37
CTSA-202ENST00000354880 DBR1Q9UK59 544 aaKnown RBP17.36■□□□□ 0.37
CTSA-202ENST00000354880 GDAQ9Y2T3 454 aa17.36■□□□□ 0.37
CTSA-202ENST00000354880 NPHP3-ACAD11A0A0J9YXS1 232 aa17.35■□□□□ 0.37
CTSA-202ENST00000354880 SMTNL1A8MU46 457 aa17.35■□□□□ 0.37
CTSA-202ENST00000354880 PPP1R3GB7ZBB8 358 aa17.35■□□□□ 0.37
CTSA-202ENST00000354880 BACH1O14867 736 aa17.35■□□□□ 0.37
CTSA-202ENST00000354880 IKBKBO14920 756 aa17.35■□□□□ 0.37
CTSA-202ENST00000354880 CD44P16070 742 aaKnown RBP17.35■□□□□ 0.37
CTSA-202ENST00000354880 ERCC5P28715 1186 aaPredicted RBP17.35■□□□□ 0.37
CTSA-202ENST00000354880 RAD51AP2Q09MP3 1159 aa17.35■□□□□ 0.37
CTSA-202ENST00000354880 CCDC65Q8IXS2 484 aa17.35■□□□□ 0.37
CTSA-202ENST00000354880 RUSC1Q9BVN2 902 aa17.35■□□□□ 0.37
CTSA-202ENST00000354880 ABHD16BQ9H3Z7 469 aa17.35■□□□□ 0.37
CTSA-202ENST00000354880 PANK4Q9NVE7 773 aa17.35■□□□□ 0.37
CTSA-202ENST00000354880 KCND2Q9NZV8 630 aa17.35■□□□□ 0.37
CTSA-202ENST00000354880 MYH9P35579 1960 aaKnown RBP17.35■□□□□ 0.37
CTSA-202ENST00000354880 MGAMO43451 1857 aa17.35■□□□□ 0.37
CTSA-202ENST00000354880 RBM47A0AV96 593 aaKnown RBP17.35■□□□□ 0.37
CTSA-202ENST00000354880 ARHGEF35A5YM69 484 aa17.35■□□□□ 0.37
CTSA-202ENST00000354880 MAP2K2P36507 400 aa17.35■□□□□ 0.37
CTSA-202ENST00000354880 RGS2P41220 211 aa17.35■□□□□ 0.37
CTSA-202ENST00000354880 MYL5Q02045 173 aa17.35■□□□□ 0.37
CTSA-202ENST00000354880 CACNB1Q02641 598 aaPredicted RBP17.35■□□□□ 0.37
CTSA-202ENST00000354880 EHHADHQ08426 723 aa17.35■□□□□ 0.37
CTSA-202ENST00000354880 STK4Q13043 487 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms