RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 LAMB3Q13751 1172 aa13.22□□□□□ -0.29
FN1-202ENST00000336916 DGKHQ86XP1 1220 aa13.22□□□□□ -0.29
FN1-202ENST00000336916 SPDYE1Q8NFV5 336 aaPredicted RBP13.22□□□□□ -0.29
FN1-202ENST00000336916 ZBED2Q9BTP6 218 aa13.22□□□□□ -0.29
FN1-202ENST00000336916 GPC4O75487 556 aa13.22□□□□□ -0.29
FN1-202ENST00000336916 SMARCA1P28370 1054 aa13.22□□□□□ -0.29
FN1-202ENST00000336916 LTKP29376 864 aa13.22□□□□□ -0.29
FN1-202ENST00000336916 LRMPQ12912 555 aa13.22□□□□□ -0.29
FN1-202ENST00000336916 TMTC3Q6ZXV5 915 aa13.22□□□□□ -0.29
FN1-202ENST00000336916 MAP4K1Q92918 833 aa13.22□□□□□ -0.29
FN1-202ENST00000336916 JAK2O60674 1132 aa13.22□□□□□ -0.29
FN1-202ENST00000336916 MAPK6Q16659 721 aa13.22□□□□□ -0.29
FN1-202ENST00000336916 KIRREL3Q8IZU9 778 aa13.22□□□□□ -0.29
FN1-202ENST00000336916 IFNAR1P17181 557 aa13.21□□□□□ -0.29
FN1-202ENST00000336916 KRT76Q01546 638 aa13.21□□□□□ -0.29
FN1-202ENST00000336916 TBCCQ15814 346 aa13.21□□□□□ -0.29
FN1-202ENST00000336916 COPB1P53618 953 aaKnown RBP13.21□□□□□ -0.29
FN1-202ENST00000336916 RBM46Q8TBY0 533 aaKnown RBP13.21□□□□□ -0.29
FN1-202ENST00000336916 FAM20AQ96MK3 541 aa13.21□□□□□ -0.29
FN1-202ENST00000336916 KATNAL1Q9BW62 490 aa13.21□□□□□ -0.29
FN1-202ENST00000336916 IRAK4Q9NWZ3 460 aa13.21□□□□□ -0.29
FN1-202ENST00000336916 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.21□□□□□ -0.29
FN1-202ENST00000336916 PGRMC1O00264 195 aaKnown RBP13.21□□□□□ -0.29
FN1-202ENST00000336916 PHKA1P46020 1223 aa13.21□□□□□ -0.29
FN1-202ENST00000336916 INPP1P49441 399 aa13.21□□□□□ -0.29
FN1-202ENST00000336916 MXI1P50539 228 aa13.21□□□□□ -0.29
FN1-202ENST00000336916 CUL1Q13616 776 aa13.21□□□□□ -0.29
FN1-202ENST00000336916 RFX6Q8HWS3 928 aa13.21□□□□□ -0.29
FN1-202ENST00000336916 BEST2Q8NFU1 509 aa13.21□□□□□ -0.29
FN1-202ENST00000336916 ATP6V1E2Q96A05 226 aa13.21□□□□□ -0.29
FN1-202ENST00000336916 GCOM2Q9BZD3 368 aaPredicted RBP13.21□□□□□ -0.29
FN1-202ENST00000336916 FGFR1OP2Q9NVK5 253 aa13.21□□□□□ -0.29
FN1-202ENST00000336916 ABCB11O95342 1321 aa13.21□□□□□ -0.29
FN1-202ENST00000336916 NR1H3Q13133 447 aa13.21□□□□□ -0.29
FN1-202ENST00000336916 WHAMMQ8TF30 809 aa13.21□□□□□ -0.29
FN1-202ENST00000336916 GJA10Q969M2 543 aa13.21□□□□□ -0.29
FN1-202ENST00000336916 SGO2Q562F6 1265 aa13.21□□□□□ -0.29
FN1-202ENST00000336916 KCTD1Q719H9 257 aa13.21□□□□□ -0.29
FN1-202ENST00000336916 TAC1P20366 129 aa13.21□□□□□ -0.3
FN1-202ENST00000336916 NAA25Q14CX7 972 aa13.21□□□□□ -0.3
FN1-202ENST00000336916 ATP6V0A4Q9HBG4 840 aa13.21□□□□□ -0.3
FN1-202ENST00000336916 MUM1Q2TAK8 710 aa13.21□□□□□ -0.3
FN1-202ENST00000336916 KIAA1755Q5JYT7 1200 aa13.21□□□□□ -0.3
FN1-202ENST00000336916 ATG16L1Q676U5 607 aa13.21□□□□□ -0.3
FN1-202ENST00000336916 ZNF653Q96CK0 615 aa13.21□□□□□ -0.3
FN1-202ENST00000336916 TSSK1BQ9BXA7 367 aa13.21□□□□□ -0.3
FN1-202ENST00000336916 GOLGA8JA6NMD2 632 aa13.2□□□□□ -0.3
FN1-202ENST00000336916 PAPOLAP51003 745 aaKnown RBP13.2□□□□□ -0.3
FN1-202ENST00000336916 MAGOHBQ96A72 148 aaKnown RBP13.2□□□□□ -0.3
FN1-202ENST00000336916 VIRMAQ69YN4 1812 aaKnown RBP13.2□□□□□ -0.3
FN1-202ENST00000336916 DENND3A2RUS2 1198 aa13.2□□□□□ -0.3
FN1-202ENST00000336916 KAZNQ674X7 775 aa13.2□□□□□ -0.3
FN1-202ENST00000336916 RABGGTAQ92696 567 aa13.2□□□□□ -0.3
FN1-202ENST00000336916 FAM149B1Q96BN6 582 aa13.2□□□□□ -0.3
FN1-202ENST00000336916 EAF2Q96CJ1 260 aaPredicted RBP13.2□□□□□ -0.3
FN1-202ENST00000336916 ACAP3Q96P50 834 aa13.2□□□□□ -0.3
FN1-202ENST00000336916 SLC39A2Q9NP94 309 aa13.2□□□□□ -0.3
FN1-202ENST00000336916 CRB1P82279 1406 aa13.2□□□□□ -0.3
FN1-202ENST00000336916 ZFXP17010 805 aaPredicted RBP13.2□□□□□ -0.3
FN1-202ENST00000336916 EPHB1P54762 984 aa13.2□□□□□ -0.3
FN1-202ENST00000336916 MRRFQ96E11 262 aaKnown RBP13.2□□□□□ -0.3
FN1-202ENST00000336916 SRPRBQ9Y5M8 271 aaKnown RBP13.2□□□□□ -0.3
FN1-202ENST00000336916 TRAPPC3O43617 180 aa13.2□□□□□ -0.3
FN1-202ENST00000336916 STAG1Q8WVM7 1258 aa13.2□□□□□ -0.3
FN1-202ENST00000336916 DLC1Q96QB1 1528 aa13.2□□□□□ -0.3
FN1-202ENST00000336916 KIAA0391O15091 583 aaKnown RBP13.2□□□□□ -0.3
FN1-202ENST00000336916 LRRC8AQ8IWT6 810 aa13.2□□□□□ -0.3
FN1-202ENST00000336916 LRRC37BQ96QE4 947 aa13.2□□□□□ -0.3
FN1-202ENST00000336916 KLC2Q9H0B6 622 aa13.2□□□□□ -0.3
FN1-202ENST00000336916 MBD5Q9P267 1494 aa13.2□□□□□ -0.3
FN1-202ENST00000336916 MSH2P43246 934 aa13.2□□□□□ -0.3
FN1-202ENST00000336916 CDR2Q01850 454 aa13.2□□□□□ -0.3
FN1-202ENST00000336916 MTMR1Q13613 665 aa13.2□□□□□ -0.3
FN1-202ENST00000336916 TBCKQ8TEA7 893 aa13.2□□□□□ -0.3
FN1-202ENST00000336916 GPKOWQ92917 476 aaPredicted RBP eCLIP13.2□□□□□ -0.3
FN1-202ENST00000336916 CLDN3O15551 220 aa13.19□□□□□ -0.3
FN1-202ENST00000336916 FCER1AP12319 257 aa13.19□□□□□ -0.3
FN1-202ENST00000336916 IQANK1A0A1B0GTG1 560 aa13.19□□□□□ -0.3
FN1-202ENST00000336916 GOLGA8MH3BSY2 632 aa13.19□□□□□ -0.3
FN1-202ENST00000336916 RBM41Q96IZ5 413 aaKnown RBP13.19□□□□□ -0.3
FN1-202ENST00000336916 NARFQ9UHQ1 456 aa13.19□□□□□ -0.3
FN1-202ENST00000336916 TRIM33Q9UPN9 1127 aa13.19□□□□□ -0.3
FN1-202ENST00000336916 KCTD17Q8N5Z5 321 aa13.19□□□□□ -0.3
FN1-202ENST00000336916 ZNF579Q8NAF0 562 aaKnown RBP13.19□□□□□ -0.3
FN1-202ENST00000336916 PRDM10Q9NQV6 1147 aa13.19□□□□□ -0.3
FN1-202ENST00000336916 ATP8B1O43520 1251 aa13.19□□□□□ -0.3
FN1-202ENST00000336916 ARHGAP42A6NI28 874 aa13.19□□□□□ -0.3
FN1-202ENST00000336916 USP17L5A8MUK1 530 aa13.19□□□□□ -0.3
FN1-202ENST00000336916 TAF1BQ53T94 588 aaPredicted RBP13.19□□□□□ -0.3
FN1-202ENST00000336916 CPA1P15085 419 aa13.19□□□□□ -0.3
FN1-202ENST00000336916 SCRN1Q12765 414 aa13.19□□□□□ -0.3
FN1-202ENST00000336916 DSTYKQ6XUX3 929 aa13.19□□□□□ -0.3
FN1-202ENST00000336916 SPATA31E1Q6ZUB1 1445 aa13.18□□□□□ -0.3
FN1-202ENST00000336916 HUS1O60921 280 aa13.18□□□□□ -0.3
FN1-202ENST00000336916 YWHAGP61981 247 aaKnown RBP eCLIP13.18□□□□□ -0.3
FN1-202ENST00000336916 VEPH1Q14D04 833 aa13.18□□□□□ -0.3
FN1-202ENST00000336916 FRA10AC1Q70Z53 315 aa13.18□□□□□ -0.3
FN1-202ENST00000336916 PDIK1LQ8N165 341 aa13.18□□□□□ -0.3
FN1-202ENST00000336916 CENPKQ9BS16 269 aa13.18□□□□□ -0.3
FN1-202ENST00000336916 PALD1Q9ULE6 856 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms