RNA–Protein interactions for RNA: YOL090W

MSH2, Transcript of Protein that binds to DNA mismatches, yeastyeast

Gene MSH2, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH2YOL090W PEP5P12868 1029 aa3.01□□□□□ -1.93
MSH2YOL090W GAC1P28006 793 aa3.01□□□□□ -1.93
MSH2YOL090W LAC1P28496 418 aa3.01□□□□□ -1.93
MSH2YOL090W ECT1P33412 323 aa3.01□□□□□ -1.93
MSH2YOL090W PAD1P33751 242 aaKnown RBP RIP-Chip data3.01□□□□□ -1.93 RIP-Chip
MSH2YOL090W RRP4P38792 359 aaKnown RBP3.01□□□□□ -1.93
MSH2YOL090W RIX1P38883 763 aaPredicted RBP3.01□□□□□ -1.93
MSH2YOL090W YAR1P46683 200 aa3.01□□□□□ -1.93
MSH2YOL090W SHR3Q02774 210 aa3.01□□□□□ -1.93
MSH2YOL090W ENT5Q03769 411 aaKnown RBP3.01□□□□□ -1.93
MSH2YOL090W YDR132CQ03900 495 aa3.01□□□□□ -1.93
MSH2YOL090W COX20Q04935 205 aa3.01□□□□□ -1.93
MSH2YOL090W YML053CQ04978 212 aa3.01□□□□□ -1.93
MSH2YOL090W SNT309Q06091 175 aaPredicted RBP3.01□□□□□ -1.93
MSH2YOL090W RXT3Q07458 294 aa3.01□□□□□ -1.93
MSH2YOL090W SCEIP03882 235 aa3.01□□□□□ -1.93
MSH2YOL090W PRP16P15938 1071 aaPredicted RBP3.01□□□□□ -1.93
MSH2YOL090W THR4P16120 514 aaKnown RBP3.01□□□□□ -1.93
MSH2YOL090W YCP4P25349 247 aaKnown RBP3.01□□□□□ -1.93
MSH2YOL090W ITR1P30605 584 aa3.01□□□□□ -1.93
MSH2YOL090W ANS1P38832 159 aa3.01□□□□□ -1.93
MSH2YOL090W YHR182WP38870 785 aa3.01□□□□□ -1.93
MSH2YOL090W YGR127WP53275 312 aa3.01□□□□□ -1.93
MSH2YOL090W VPS62P53285 467 aa3.01□□□□□ -1.93
MSH2YOL090W IST1P53843 298 aaPredicted RBP3.01□□□□□ -1.93
MSH2YOL090W ESBP6P53918 673 aa3.01□□□□□ -1.93
MSH2YOL090W RLI1Q03195 608 aaKnown RBP3.01□□□□□ -1.93
MSH2YOL090W GTO3Q04806 366 aa3.01□□□□□ -1.93
MSH2YOL090W RIM15P43565 1770 aa3□□□□□ -1.93
MSH2YOL090W TDH3P00359 332 aaKnown RBP RIP-Chip data3□□□□□ -1.93not detected
MSH2YOL090W COX2P00410 251 aa3□□□□□ -1.93
MSH2YOL090W CHO2P05374 869 aaKnown RBP3□□□□□ -1.93
MSH2YOL090W GPH1P06738 902 aaKnown RBP3□□□□□ -1.93
MSH2YOL090W PEP4P07267 405 aaKnown RBP3□□□□□ -1.93
MSH2YOL090W RPS16AP0CX51 143 aaKnown RBP3□□□□□ -1.93
MSH2YOL090W RPS16BP0CX52 143 aaKnown RBP3□□□□□ -1.93
MSH2YOL090W STE4P18851 423 aa3□□□□□ -1.93
MSH2YOL090W GDA1P32621 518 aa3□□□□□ -1.93
MSH2YOL090W SOF1P33750 489 aaKnown RBP3□□□□□ -1.93
MSH2YOL090W RPL32P38061 130 aaKnown RBP3□□□□□ -1.93
MSH2YOL090W PHM8P40025 321 aa3□□□□□ -1.93
MSH2YOL090W UTP18P40362 594 aaPredicted RBP3□□□□□ -1.93
MSH2YOL090W SPG5P42933 373 aa3□□□□□ -1.93
MSH2YOL090W UBC11P52492 156 aa3□□□□□ -1.93
MSH2YOL090W YIP4P53093 235 aa3□□□□□ -1.93
MSH2YOL090W RRN11Q04712 507 aa3□□□□□ -1.93
MSH2YOL090W GPN3Q06543 272 aa3□□□□□ -1.93
MSH2YOL090W YPR022CQ12139 1133 aa3□□□□□ -1.93
MSH2YOL090W YDR262WQ12331 272 aa3□□□□□ -1.93
MSH2YOL090W LAM4P38800 1345 aa3□□□□□ -1.93
MSH2YOL090W CDC21P06785 304 aa3□□□□□ -1.93
MSH2YOL090W MATALPHA1P0CY06 175 aa3□□□□□ -1.93
MSH2YOL090W HMLALPHA1P0CY07 175 aa3□□□□□ -1.93
MSH2YOL090W ERG11P10614 530 aa3□□□□□ -1.93
MSH2YOL090W ATP10P18496 279 aa3□□□□□ -1.93
MSH2YOL090W YPK2P18961 677 aa3□□□□□ -1.93
MSH2YOL090W GBP2P25555 427 aaKnown RBP RIP-Chip data3□□□□□ -1.93not detected
MSH2YOL090W FUB1P25659 250 aa3□□□□□ -1.93
MSH2YOL090W GSY2P27472 705 aa3□□□□□ -1.93
MSH2YOL090W SOR1P35497 357 aaKnown RBP3□□□□□ -1.93
MSH2YOL090W OCT1P35999 772 aa3□□□□□ -1.93
MSH2YOL090W ICS2P38284 255 aa3□□□□□ -1.93
MSH2YOL090W VHC1P38329 1120 aa3□□□□□ -1.93
MSH2YOL090W RTT107P38850 1070 aa3□□□□□ -1.93
MSH2YOL090W CCT2P39076 527 aaKnown RBP3□□□□□ -1.93
MSH2YOL090W PLB1P39105 664 aa3□□□□□ -1.93
MSH2YOL090W STE24P47154 453 aa3□□□□□ -1.93
MSH2YOL090W DIP5P53388 608 aa3□□□□□ -1.93
MSH2YOL090W YMR087WQ04299 284 aa3□□□□□ -1.93
MSH2YOL090W SOR2Q07786 357 aa3□□□□□ -1.93
MSH2YOL090W YPR053CQ6Q5F3 151 aa3□□□□□ -1.93
MSH2YOL090W SIR3P06701 978 aa2.99□□□□□ -1.93
MSH2YOL090W MAS1P10507 462 aa2.99□□□□□ -1.93
MSH2YOL090W STE11P23561 717 aa2.99□□□□□ -1.93
MSH2YOL090W YCR016WP25617 290 aaKnown RBP2.99□□□□□ -1.93
MSH2YOL090W RPS5P26783 225 aaKnown RBP2.99□□□□□ -1.93
MSH2YOL090W ZIP1P31111 875 aa2.99□□□□□ -1.93
MSH2YOL090W PRP21P32524 280 aaPredicted RBP2.99□□□□□ -1.93
MSH2YOL090W NRP1P32770 719 aaKnown RBP RIP-Chip data2.99□□□□□ -1.93not detected
MSH2YOL090W CYM1P32898 989 aa2.99□□□□□ -1.93
MSH2YOL090W MTR2P34232 184 aaKnown RBP2.99□□□□□ -1.93
MSH2YOL090W RPF2P36160 344 aaKnown RBP2.99□□□□□ -1.93
MSH2YOL090W LNP1P38878 278 aa2.99□□□□□ -1.93
MSH2YOL090W PRM9P39551 298 aa2.99□□□□□ -1.93
MSH2YOL090W GAT2P40209 560 aa2.99□□□□□ -1.93
MSH2YOL090W PTR3P43606 678 aa2.99□□□□□ -1.93
MSH2YOL090W PMT5P52867 743 aa2.99□□□□□ -1.93
MSH2YOL090W RMR1P53060 241 aa2.99□□□□□ -1.93
MSH2YOL090W MYO5Q04439 1219 aaKnown RBP2.99□□□□□ -1.93
MSH2YOL090W MRPL35Q06678 367 aa2.99□□□□□ -1.93
MSH2YOL090W CYC7P00045 113 aa2.99□□□□□ -1.93
MSH2YOL090W TDH2P00358 332 aaKnown RBP2.99□□□□□ -1.93
MSH2YOL090W RPL18AP0CX49 186 aaKnown RBP2.99□□□□□ -1.93
MSH2YOL090W RPL18BP0CX50 186 aaKnown RBP2.99□□□□□ -1.93
MSH2YOL090W CDC23P16522 626 aa2.99□□□□□ -1.93
MSH2YOL090W MET16P18408 261 aaPredicted RBP2.99□□□□□ -1.93
MSH2YOL090W MEI5P32489 222 aa2.99□□□□□ -1.93
MSH2YOL090W RGT1P32862 1170 aa2.99□□□□□ -1.93
MSH2YOL090W SPC97P38863 823 aa2.99□□□□□ -1.93
MSH2YOL090W FET3P38993 636 aa2.99□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms