RNA–Protein interactions for RNA: YLR442C

SIR3, Transcript of Silencing protein, yeastyeast

Gene SIR3, Length 2,937 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR3YLR442C PER1P25625 357 aa2.37□□□□□ -2.03
SIR3YLR442C URA7P28274 579 aaKnown RBP2.37□□□□□ -2.03
SIR3YLR442C DAL3P32459 195 aa2.37□□□□□ -2.03
SIR3YLR442C CSG2P35206 410 aa2.37□□□□□ -2.03
SIR3YLR442C AIM29P36154 155 aa2.37□□□□□ -2.03
SIR3YLR442C COS4P43542 379 aa2.37□□□□□ -2.03
SIR3YLR442C NMD5P46970 1048 aa2.37□□□□□ -2.03
SIR3YLR442C YJR141WP47172 347 aaPredicted RBP2.37□□□□□ -2.03
SIR3YLR442C PRP38Q00723 242 aaPredicted RBP2.37□□□□□ -2.03
SIR3YLR442C APM1Q00776 475 aaPredicted RBP2.37□□□□□ -2.03
SIR3YLR442C ENT5Q03769 411 aaKnown RBP2.37□□□□□ -2.03
SIR3YLR442C SDH7Q04401 133 aa2.37□□□□□ -2.03
SIR3YLR442C HLR1Q04429 423 aa2.37□□□□□ -2.03
SIR3YLR442C CTS2Q06350 511 aa2.37□□□□□ -2.03
SIR3YLR442C GSH2Q08220 491 aa2.37□□□□□ -2.03
SIR3YLR442C UAF30Q08747 228 aa2.37□□□□□ -2.03
SIR3YLR442C YLR053CQ12026 108 aa2.37□□□□□ -2.03
SIR3YLR442C YOR022CQ12204 715 aa2.37□□□□□ -2.03
SIR3YLR442C SUL2Q12325 893 aa2.37□□□□□ -2.03
SIR3YLR442C DCN1Q12395 269 aa2.37□□□□□ -2.03
SIR3YLR442C EMP46Q12396 444 aa2.37□□□□□ -2.03
SIR3YLR442C NFT1P0CE68 1218 aa2.36□□□□□ -2.03
SIR3YLR442C PET54P10834 293 aa2.36□□□□□ -2.03
SIR3YLR442C PCT1P13259 424 aa2.36□□□□□ -2.03
SIR3YLR442C APE1P14904 514 aa2.36□□□□□ -2.03
SIR3YLR442C HPR1P17629 752 aaKnown RBP2.36□□□□□ -2.03
SIR3YLR442C SLY1P22213 666 aa2.36□□□□□ -2.03
SIR3YLR442C RIT1P23796 513 aa2.36□□□□□ -2.03
SIR3YLR442C ADH7P25377 361 aa2.36□□□□□ -2.03
SIR3YLR442C FAA1P30624 700 aaKnown RBP2.36□□□□□ -2.03
SIR3YLR442C NDI1P32340 513 aa2.36□□□□□ -2.03
SIR3YLR442C SPO23P33757 523 aa2.36□□□□□ -2.03
SIR3YLR442C PIN4P34217 668 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
SIR3YLR442C FMP23P38231 175 aa2.36□□□□□ -2.03
SIR3YLR442C RRT2P38332 387 aa2.36□□□□□ -2.03
SIR3YLR442C POP4P38336 279 aa2.36□□□□□ -2.03
SIR3YLR442C PCA1P38360 1216 aa2.36□□□□□ -2.03
SIR3YLR442C MMS21P38632 267 aa2.36□□□□□ -2.03
SIR3YLR442C STB5P38699 743 aa2.36□□□□□ -2.03
SIR3YLR442C LYS9P38999 446 aa2.36□□□□□ -2.03
SIR3YLR442C SDP1P40479 209 aa2.36□□□□□ -2.03
SIR3YLR442C RPC17P47076 161 aa2.36□□□□□ -2.03
SIR3YLR442C TAH11P47112 604 aa2.36□□□□□ -2.03
SIR3YLR442C YPT11P48559 417 aa2.36□□□□□ -2.03
SIR3YLR442C ARE2P53629 642 aaKnown RBP2.36□□□□□ -2.03
SIR3YLR442C REG1Q00816 1014 aa2.36□□□□□ -2.03
SIR3YLR442C ATG21Q02887 496 aa2.36□□□□□ -2.03
SIR3YLR442C HCR1Q05775 265 aaKnown RBP2.36□□□□□ -2.03
SIR3YLR442C CUR1Q06469 252 aa2.36□□□□□ -2.03
SIR3YLR442C RTT109Q07794 436 aa2.36□□□□□ -2.03
SIR3YLR442C NGL1Q08213 363 aaKnown RBP2.36□□□□□ -2.03
SIR3YLR442C MCH5Q08777 521 aa2.36□□□□□ -2.03
SIR3YLR442C YPL199CQ08954 240 aa2.36□□□□□ -2.03
SIR3YLR442C SAM4Q08985 325 aaKnown RBP2.36□□□□□ -2.03
SIR3YLR442C YPL150WQ12152 901 aa2.36□□□□□ -2.03
SIR3YLR442C YLR108CQ12259 485 aa2.36□□□□□ -2.03
SIR3YLR442C TPT1Q12272 230 aaKnown RBP2.36□□□□□ -2.03
SIR3YLR442C YIR021W-AQ3E739 70 aa2.36□□□□□ -2.03
SIR3YLR442C SLO1Q3E784 85 aa2.36□□□□□ -2.03
SIR3YLR442C ILV5P06168 395 aaKnown RBP2.36□□□□□ -2.03
SIR3YLR442C RPL1AP0CX43 217 aaKnown RBP2.36□□□□□ -2.03
SIR3YLR442C RPL1BP0CX44 217 aaKnown RBP2.36□□□□□ -2.03
SIR3YLR442C STF2P16965 84 aa2.36□□□□□ -2.03
SIR3YLR442C ART10P18634 518 aaKnown RBP2.36□□□□□ -2.03
SIR3YLR442C ERV1P27882 189 aa2.36□□□□□ -2.03
SIR3YLR442C AAR2P32357 355 aaPredicted RBP2.36□□□□□ -2.03
SIR3YLR442C PHA2P32452 334 aa2.36□□□□□ -2.03
SIR3YLR442C PDB1P32473 366 aaKnown RBP2.36□□□□□ -2.03
SIR3YLR442C SCO2P38072 301 aa2.36□□□□□ -2.03
SIR3YLR442C MAL33P38157 468 aa2.36□□□□□ -2.03
SIR3YLR442C RRN10P38204 145 aa2.36□□□□□ -2.03
SIR3YLR442C DER1P38307 211 aa2.36□□□□□ -2.03
SIR3YLR442C YER130CP39959 443 aa2.36□□□□□ -2.03
SIR3YLR442C YIL108WP40483 696 aaKnown RBP2.36□□□□□ -2.03
SIR3YLR442C IDS2P46958 469 aa2.36□□□□□ -2.03
SIR3YLR442C CTF18P49956 741 aa2.36□□□□□ -2.03
SIR3YLR442C TIM21P53220 239 aa2.36□□□□□ -2.03
SIR3YLR442C RHO5P53879 331 aaKnown RBP2.36□□□□□ -2.03
SIR3YLR442C MFM1Q02783 413 aa2.36□□□□□ -2.03
SIR3YLR442C YDR476CQ03362 224 aa2.36□□□□□ -2.03
SIR3YLR442C ACL4Q03771 387 aa2.36□□□□□ -2.03
SIR3YLR442C YFH1Q07540 174 aa2.36□□□□□ -2.03
SIR3YLR442C AAD4Q07747 329 aa2.36□□□□□ -2.03
SIR3YLR442C NMD4Q12129 218 aa2.36□□□□□ -2.03
SIR3YLR442C ATG34Q12292 412 aa2.36□□□□□ -2.03
SIR3YLR442C YDR262WQ12331 272 aa2.36□□□□□ -2.03
SIR3YLR442C EFG1Q3E705 233 aaKnown RBP2.36□□□□□ -2.03
SIR3YLR442C YBR121C-AP0C5L4 52 aa2.35□□□□□ -2.03
SIR3YLR442C RPL35AP0CX84 120 aaKnown RBP2.35□□□□□ -2.03
SIR3YLR442C RPL35BP0CX85 120 aaKnown RBP2.35□□□□□ -2.03
SIR3YLR442C GCN3P14741 305 aa2.35□□□□□ -2.03
SIR3YLR442C CNB1P25296 175 aa2.35□□□□□ -2.03
SIR3YLR442C YCP4P25349 247 aaKnown RBP2.35□□□□□ -2.03
SIR3YLR442C LAC1P28496 418 aa2.35□□□□□ -2.03
SIR3YLR442C HRR25P29295 494 aaKnown RBP2.35□□□□□ -2.03
SIR3YLR442C RPT5P33297 434 aaKnown RBP2.35□□□□□ -2.03
SIR3YLR442C SHP1P34223 423 aa2.35□□□□□ -2.03
SIR3YLR442C ANR2P36090 516 aaPredicted RBP2.35□□□□□ -2.03
SIR3YLR442C YCR087C-AP37263 153 aa2.35□□□□□ -2.03
SIR3YLR442C FAT1P38225 669 aa2.35□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 23 ms