RNA–Protein interactions for RNA: YIL030C

SSM4, Transcript of Ubiquitin-protein ligase involved in ER-associated protein degradation, yeastyeast

Gene SSM4, Length 3,960 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSM4YIL030C HXT15P54854 567 aa3.41□□□□□ -1.86
SSM4YIL030C LAP3Q01532 483 aaKnown RBP RIP-Chip data3.41□□□□□ -1.86not detected
SSM4YIL030C PET117Q02771 107 aa3.41□□□□□ -1.86
SSM4YIL030C ODC1Q03028 310 aa3.41□□□□□ -1.86
SSM4YIL030C PLM2Q04383 521 aa3.41□□□□□ -1.86
SSM4YIL030C BSP1Q06604 576 aa3.41□□□□□ -1.86
SSM4YIL030C GSH2Q08220 491 aa3.41□□□□□ -1.86
SSM4YIL030C YNG1Q08465 219 aa3.41□□□□□ -1.86
SSM4YIL030C YDL176WQ12027 708 aa3.41□□□□□ -1.86
SSM4YIL030C NMD4Q12129 218 aa3.41□□□□□ -1.86
SSM4YIL030C BRR1Q99177 341 aaPredicted RBP3.41□□□□□ -1.86
SSM4YIL030C RPA135P22138 1203 aaKnown RBP3.4□□□□□ -1.86
SSM4YIL030C YCL068CP25593 260 aa3.4□□□□□ -1.86
SSM4YIL030C CDC50P25656 391 aa3.4□□□□□ -1.86
SSM4YIL030C SPO23P33757 523 aa3.4□□□□□ -1.86
SSM4YIL030C SKT5P34226 696 aa3.4□□□□□ -1.86
SSM4YIL030C POP8P38208 133 aa3.4□□□□□ -1.86
SSM4YIL030C FMP48P53233 369 aa3.4□□□□□ -1.86
SSM4YIL030C YGR053CP53234 283 aa3.4□□□□□ -1.86
SSM4YIL030C YSA1Q01976 231 aa3.4□□□□□ -1.86
SSM4YIL030C BUR2Q05949 395 aa3.4□□□□□ -1.86
SSM4YIL030C NBP2Q12163 236 aa3.4□□□□□ -1.86
SSM4YIL030C DGK1Q12382 290 aa3.4□□□□□ -1.86
SSM4YIL030C TSC13Q99190 310 aa3.4□□□□□ -1.86
SSM4YIL030C CCH1P50077 2039 aa3.4□□□□□ -1.86
SSM4YIL030C YDR157WA0A023PZE8 133 aa3.4□□□□□ -1.87
SSM4YIL030C YMR084WA2P2R3 262 aa3.4□□□□□ -1.87
SSM4YIL030C MET17P06106 444 aa3.4□□□□□ -1.87
SSM4YIL030C HAP2P06774 265 aa3.4□□□□□ -1.87
SSM4YIL030C HVG1P0CE11 249 aa3.4□□□□□ -1.87
SSM4YIL030C YCR016WP25617 290 aaKnown RBP3.4□□□□□ -1.87
SSM4YIL030C GUT1P32190 709 aa3.4□□□□□ -1.87
SSM4YIL030C TDP1P38319 544 aa3.4□□□□□ -1.87
SSM4YIL030C DBP8P38719 431 aa3.4□□□□□ -1.87
SSM4YIL030C YHL041WP38730 149 aa3.4□□□□□ -1.87
SSM4YIL030C SBE22P38814 852 aa3.4□□□□□ -1.87
SSM4YIL030C ATG7P38862 630 aa3.4□□□□□ -1.87
SSM4YIL030C TIM17P39515 158 aa3.4□□□□□ -1.87
SSM4YIL030C VAB2P40003 282 aa3.4□□□□□ -1.87
SSM4YIL030C RPS10BP46784 105 aaKnown RBP3.4□□□□□ -1.87
SSM4YIL030C VTC4P47075 721 aa3.4□□□□□ -1.87
SSM4YIL030C MPS2P53159 387 aa3.4□□□□□ -1.87
SSM4YIL030C SPP1Q03012 353 aa3.4□□□□□ -1.87
SSM4YIL030C RVB1Q03940 463 aaKnown RBP3.4□□□□□ -1.87
SSM4YIL030C CAC2Q04199 468 aa3.4□□□□□ -1.87
SSM4YIL030C ENT2Q05785 613 aa3.4□□□□□ -1.87
SSM4YIL030C RSB1Q08417 382 aa3.4□□□□□ -1.87
SSM4YIL030C RPS10AQ08745 105 aaPredicted RBP3.4□□□□□ -1.87
SSM4YIL030C YDL199CQ12407 687 aa3.4□□□□□ -1.87
SSM4YIL030C APC2Q12440 853 aa3.4□□□□□ -1.87
SSM4YIL030C MRX4Q12467 430 aa3.4□□□□□ -1.87
SSM4YIL030C COX6P00427 148 aa3.4□□□□□ -1.87
SSM4YIL030C PRB1P09232 635 aa3.4□□□□□ -1.87
SSM4YIL030C TY2A-LR1P0C2J4 438 aa3.4□□□□□ -1.87
SSM4YIL030C TY2A-FP0CX61 438 aa3.4□□□□□ -1.87
SSM4YIL030C TY2A-GR2P0CX62 438 aa3.4□□□□□ -1.87
SSM4YIL030C STE12P13574 688 aa3.4□□□□□ -1.87
SSM4YIL030C HAP4P14064 554 aa3.4□□□□□ -1.87
SSM4YIL030C AMD1P15274 810 aaKnown RBP3.4□□□□□ -1.87
SSM4YIL030C TY2A-CP25383 438 aa3.4□□□□□ -1.87
SSM4YIL030C TKL2P33315 681 aa3.4□□□□□ -1.87
SSM4YIL030C SPC34P36131 295 aa3.4□□□□□ -1.87
SSM4YIL030C SCO2P38072 301 aa3.4□□□□□ -1.87
SSM4YIL030C VMA22P38784 181 aa3.4□□□□□ -1.87
SSM4YIL030C YHR219WP38900 624 aa3.4□□□□□ -1.87
SSM4YIL030C VMA7P39111 118 aa3.4□□□□□ -1.87
SSM4YIL030C RRG9P40156 214 aa3.4□□□□□ -1.87
SSM4YIL030C GLR1P41921 483 aaKnown RBP3.4□□□□□ -1.87
SSM4YIL030C TY2A-DR2Q03483 438 aa3.4□□□□□ -1.87
SSM4YIL030C CTK1Q03957 528 aaKnown RBP3.4□□□□□ -1.87
SSM4YIL030C MGR3Q04472 501 aa3.4□□□□□ -1.87
SSM4YIL030C ELP6Q04868 273 aa3.4□□□□□ -1.87
SSM4YIL030C YLR012CQ07927 99 aa3.4□□□□□ -1.87
SSM4YIL030C TRE2Q08693 809 aa3.4□□□□□ -1.87
SSM4YIL030C MMT2Q08970 484 aa3.4□□□□□ -1.87
SSM4YIL030C TY2A-BQ12260 438 aa3.4□□□□□ -1.87
SSM4YIL030C TY2A-OR2Q12293 438 aa3.4□□□□□ -1.87
SSM4YIL030C YOL114CQ12322 202 aa3.4□□□□□ -1.87
SSM4YIL030C TY2A-DR1Q12392 438 aa3.4□□□□□ -1.87
SSM4YIL030C TY2A-OR1Q12439 438 aa3.4□□□□□ -1.87
SSM4YIL030C EFG1Q3E705 233 aaKnown RBP3.4□□□□□ -1.87
SSM4YIL030C CMC2Q3E7A4 109 aa3.4□□□□□ -1.87
SSM4YIL030C TY2A-DR3Q99303 438 aa3.4□□□□□ -1.87
SSM4YIL030C SEC12P11655 471 aa3.39□□□□□ -1.87
SSM4YIL030C SED4P25365 1065 aa3.39□□□□□ -1.87
SSM4YIL030C LRE1P25579 583 aaKnown RBP3.39□□□□□ -1.87
SSM4YIL030C PRR1P28708 518 aa3.39□□□□□ -1.87
SSM4YIL030C NTG1P31378 399 aa3.39□□□□□ -1.87
SSM4YIL030C MF(ALPHA)2P32435 120 aa3.39□□□□□ -1.87
SSM4YIL030C YPT52P36018 234 aaKnown RBP3.39□□□□□ -1.87
SSM4YIL030C SIF2P38262 535 aa3.39□□□□□ -1.87
SSM4YIL030C RRF1P38771 230 aa3.39□□□□□ -1.87
SSM4YIL030C TRR2P38816 342 aa3.39□□□□□ -1.87
SSM4YIL030C MAD2P40958 196 aa3.39□□□□□ -1.87
SSM4YIL030C SSU1P41930 458 aa3.39□□□□□ -1.87
SSM4YIL030C SER2P42941 309 aa3.39□□□□□ -1.87
SSM4YIL030C CAK1P43568 368 aaPredicted RBP3.39□□□□□ -1.87
SSM4YIL030C AIM24P47127 394 aa3.39□□□□□ -1.87
SSM4YIL030C EFM3P47163 339 aa3.39□□□□□ -1.87
SSM4YIL030C BUD9P53226 547 aa3.39□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 80.9 ms