RNA–Protein interactions for RNA: YHR120W

MSH1, Transcript of DNA-binding protein of the mitochondria, yeastyeast

Gene MSH1, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH1YHR120W PEX12Q04370 399 aa4.82□□□□□ -1.64
MSH1YHR120W YPR011CQ12251 326 aa4.82□□□□□ -1.64
MSH1YHR120W TRM10Q12400 293 aa4.82□□□□□ -1.64
MSH1YHR120W HXT4P32467 576 aa4.81□□□□□ -1.64
MSH1YHR120W PRP21P32524 280 aaPredicted RBP4.81□□□□□ -1.64
MSH1YHR120W GDH2P33327 1092 aaKnown RBP4.81□□□□□ -1.64
MSH1YHR120W RMA1P36001 430 aaKnown RBP4.81□□□□□ -1.64
MSH1YHR120W FMP23P38231 175 aa4.81□□□□□ -1.64
MSH1YHR120W APE4P38821 490 aa4.81□□□□□ -1.64
MSH1YHR120W HXT6P39003 570 aaKnown RBP4.81□□□□□ -1.64
MSH1YHR120W HXT7P39004 570 aa4.81□□□□□ -1.64
MSH1YHR120W VRG4P40107 337 aa4.81□□□□□ -1.64
MSH1YHR120W VMA13P41807 478 aaKnown RBP4.81□□□□□ -1.64
MSH1YHR120W GPI8P49018 411 aa4.81□□□□□ -1.64
MSH1YHR120W SLD3P53135 668 aa4.81□□□□□ -1.64
MSH1YHR120W CIK1Q01649 594 aa4.81□□□□□ -1.64
MSH1YHR120W SIZ1Q04195 904 aa4.81□□□□□ -1.64
MSH1YHR120W URC2Q04411 772 aa4.81□□□□□ -1.64
MSH1YHR120W ROY1Q04847 553 aa4.81□□□□□ -1.64
MSH1YHR120W YPL245WQ12179 454 aaKnown RBP4.81□□□□□ -1.64
MSH1YHR120W AI3P03877 415 aa4.81□□□□□ -1.64
MSH1YHR120W GPH1P06738 902 aaKnown RBP4.81□□□□□ -1.64
MSH1YHR120W OCA4P25366 362 aa4.81□□□□□ -1.64
MSH1YHR120W IMG1P25626 169 aa4.81□□□□□ -1.64
MSH1YHR120W SFA1P32771 386 aa4.81□□□□□ -1.64
MSH1YHR120W PET112P33893 541 aa4.81□□□□□ -1.64
MSH1YHR120W PTH2P34222 208 aa4.81□□□□□ -1.64
MSH1YHR120W KKQ8P36004 724 aa4.81□□□□□ -1.64
MSH1YHR120W SPC34P36131 295 aa4.81□□□□□ -1.64
MSH1YHR120W YBR139WP38109 508 aa4.81□□□□□ -1.64
MSH1YHR120W RRN10P38204 145 aa4.81□□□□□ -1.64
MSH1YHR120W SSZ1P38788 538 aaKnown RBP4.81□□□□□ -1.64
MSH1YHR120W AZF1P41696 914 aa4.81□□□□□ -1.64
MSH1YHR120W YPL107WQ02873 248 aa4.81□□□□□ -1.64
MSH1YHR120W REH1Q06709 432 aa4.81□□□□□ -1.64
MSH1YHR120W BRE4Q07660 1125 aa4.81□□□□□ -1.64
MSH1YHR120W IRC13Q08630 104 aa4.81□□□□□ -1.64
MSH1YHR120W HUA2Q12134 243 aa4.81□□□□□ -1.64
MSH1YHR120W YPR022CQ12139 1133 aa4.81□□□□□ -1.64
MSH1YHR120W LEU9Q12166 604 aaKnown RBP4.81□□□□□ -1.64
MSH1YHR120W BRR1Q99177 341 aaPredicted RBP4.81□□□□□ -1.64
MSH1YHR120W MF(ALPHA)1P01149 165 aa4.8□□□□□ -1.64
MSH1YHR120W HXK2P04807 486 aaKnown RBP4.8□□□□□ -1.64
MSH1YHR120W RAD7P06779 565 aa4.8□□□□□ -1.64
MSH1YHR120W RPS21AP0C0V8 87 aaKnown RBP4.8□□□□□ -1.64
MSH1YHR120W GCN3P14741 305 aa4.8□□□□□ -1.64
MSH1YHR120W KGD1P20967 1014 aaKnown RBP4.8□□□□□ -1.64
MSH1YHR120W AGP1P25376 633 aa4.8□□□□□ -1.64
MSH1YHR120W ADE1P27616 306 aa4.8□□□□□ -1.64
MSH1YHR120W PRO1P32264 428 aa4.8□□□□□ -1.64
MSH1YHR120W EXO84P38261 753 aa4.8□□□□□ -1.64
MSH1YHR120W YHR112CP38716 378 aa4.8□□□□□ -1.64
MSH1YHR120W MET30P39014 640 aa4.8□□□□□ -1.64
MSH1YHR120W UPF3P48412 387 aaKnown RBP4.8□□□□□ -1.64
MSH1YHR120W COG5P53951 403 aa4.8□□□□□ -1.64
MSH1YHR120W ERF2Q06551 359 aa4.8□□□□□ -1.64
MSH1YHR120W ARG3P05150 338 aa4.8□□□□□ -1.64
MSH1YHR120W CBS2P14905 389 aa4.8□□□□□ -1.64
MSH1YHR120W EHT1P38295 451 aa4.8□□□□□ -1.64
MSH1YHR120W MNT3P40549 630 aa4.8□□□□□ -1.64
MSH1YHR120W PTR3P43606 678 aa4.8□□□□□ -1.64
MSH1YHR120W GUS1P46655 708 aaKnown RBP RIP-Chip data4.8□□□□□ -1.64not detected
MSH1YHR120W ATP22P50273 684 aaPredicted RBP4.8□□□□□ -1.64
MSH1YHR120W YNR021WP53723 404 aaKnown RBP4.8□□□□□ -1.64
MSH1YHR120W RNH1Q04740 348 aa4.8□□□□□ -1.64
MSH1YHR120W MFG1Q07684 458 aa4.8□□□□□ -1.64
MSH1YHR120W SOG2Q08817 791 aa4.8□□□□□ -1.64
MSH1YHR120W SCM3Q12334 223 aa4.8□□□□□ -1.64
MSH1YHR120W PNO1Q99216 274 aaKnown RBP4.8□□□□□ -1.64
MSH1YHR120W SAP30P38429 201 aa4.79□□□□□ -1.64
MSH1YHR120W STS1P38637 319 aa4.79□□□□□ -1.64
MSH1YHR120W IPT1P38954 527 aa4.79□□□□□ -1.64
MSH1YHR120W SYG1P40528 902 aa4.79□□□□□ -1.64
MSH1YHR120W GAB1P41733 394 aa4.79□□□□□ -1.64
MSH1YHR120W KEL2P50090 882 aa4.79□□□□□ -1.64
MSH1YHR120W IMD4P50094 524 aaKnown RBP4.79□□□□□ -1.64
MSH1YHR120W IGO1P53897 168 aa4.79□□□□□ -1.64
MSH1YHR120W GIP3Q03016 1276 aa4.79□□□□□ -1.64
MSH1YHR120W ARP10Q04549 284 aa4.79□□□□□ -1.64
MSH1YHR120W DTD1Q07648 150 aaKnown RBP4.79□□□□□ -1.64
MSH1YHR120W MED2Q12124 431 aa4.79□□□□□ -1.64
MSH1YHR120W WTM1Q12363 437 aaKnown RBP4.79□□□□□ -1.64
MSH1YHR120W MHF2Q3E829 80 aa4.79□□□□□ -1.64
MSH1YHR120W STF2P16965 84 aa4.79□□□□□ -1.64
MSH1YHR120W DAP2P18962 818 aa4.79□□□□□ -1.64
MSH1YHR120W PEX3P28795 441 aa4.79□□□□□ -1.64
MSH1YHR120W ARP2P32381 391 aaKnown RBP4.79□□□□□ -1.64
MSH1YHR120W NUP2P32499 720 aa4.79□□□□□ -1.64
MSH1YHR120W HBS1P32769 611 aaKnown RBP4.79□□□□□ -1.64
MSH1YHR120W PRE3P38624 215 aa4.79□□□□□ -1.64
MSH1YHR120W MTW1P39731 289 aa4.79□□□□□ -1.64
MSH1YHR120W TWF1P53250 332 aa4.79□□□□□ -1.64
MSH1YHR120W IRC15Q02733 499 aa4.79□□□□□ -1.64
MSH1YHR120W EFR3Q03653 782 aaKnown RBP4.79□□□□□ -1.64
MSH1YHR120W GLE1Q12315 538 aa4.79□□□□□ -1.64
MSH1YHR120W MHT1Q12525 324 aa4.79□□□□□ -1.64
MSH1YHR120W UBC8P28263 218 aa4.79□□□□□ -1.64
MSH1YHR120W SWD1P39706 426 aa4.79□□□□□ -1.64
MSH1YHR120W TPA1P40032 644 aaKnown RBP4.79□□□□□ -1.64
MSH1YHR120W FCY21P40039 528 aa4.79□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms