RNA–Protein interactions for RNA: YGR195W

SKI6, Transcript of Exosome non-catalytic core component, yeast

Gene SKI6, Length 741 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKI6	YGR195W	PRP39	P39682	629 aa	Known RBP	4.98	□□□□□ -1.61
SKI6	YGR195W	OPT1	P40897	799 aa		4.98	□□□□□ -1.61
SKI6	YGR195W	PAC11	P40960	533 aa		4.98	□□□□□ -1.61
SKI6	YGR195W	YFR020W	P43600	232 aa		4.98	□□□□□ -1.61
SKI6	YGR195W	TOS3	P43637	560 aa		4.98	□□□□□ -1.61
SKI6	YGR195W	ESBP6	P53918	673 aa		4.98	□□□□□ -1.61
SKI6	YGR195W	STD1	Q02794	444 aa		4.98	□□□□□ -1.61
SKI6	YGR195W	EMI2	Q04409	500 aa	Known RBP	4.98	□□□□□ -1.61
SKI6	YGR195W	GFD1	Q04839	188 aa	Known RBP	4.98	□□□□□ -1.61
SKI6	YGR195W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.98	□□□□□ -1.61	not detected
SKI6	YGR195W	YOR012W	Q12351	137 aa		4.98	□□□□□ -1.61
SKI6	YGR195W	CMC2	Q3E7A4	109 aa		4.98	□□□□□ -1.61
SKI6	YGR195W	BRR1	Q99177	341 aa	Predicted RBP	4.98	□□□□□ -1.61
SKI6	YGR195W	RAV1	P47104	1357 aa		4.98	□□□□□ -1.61
SKI6	YGR195W	COR1	P07256	457 aa		4.97	□□□□□ -1.61
SKI6	YGR195W	RAP1	P11938	827 aa		4.97	□□□□□ -1.61
SKI6	YGR195W	PCT1	P13259	424 aa		4.97	□□□□□ -1.61
SKI6	YGR195W	DAL81	P21657	970 aa		4.97	□□□□□ -1.61
SKI6	YGR195W	RNR3	P21672	869 aa	Known RBP	4.97	□□□□□ -1.61
SKI6	YGR195W	AMD2	P22580	549 aa		4.97	□□□□□ -1.61
SKI6	YGR195W	RVS161	P25343	265 aa	Known RBP	4.97	□□□□□ -1.61
SKI6	YGR195W	YUR1	P26725	428 aa		4.97	□□□□□ -1.61
SKI6	YGR195W	ATP11	P32453	318 aa		4.97	□□□□□ -1.61
SKI6	YGR195W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
SKI6	YGR195W	ECT1	P33412	323 aa		4.97	□□□□□ -1.61
SKI6	YGR195W	MAL32	P38158	584 aa		4.97	□□□□□ -1.61
SKI6	YGR195W	RTC2	P38279	296 aa		4.97	□□□□□ -1.61
SKI6	YGR195W	STN1	P38960	494 aa		4.97	□□□□□ -1.61
SKI6	YGR195W	SNL1	P40548	159 aa		4.97	□□□□□ -1.61
SKI6	YGR195W	BNA3	P47039	444 aa	Known RBP	4.97	□□□□□ -1.61
SKI6	YGR195W	COG2	P53271	262 aa		4.97	□□□□□ -1.61
SKI6	YGR195W	MAL12	P53341	584 aa		4.97	□□□□□ -1.61
SKI6	YGR195W	RET3	P53600	189 aa		4.97	□□□□□ -1.61
SKI6	YGR195W	TAF12	Q03761	539 aa		4.97	□□□□□ -1.61
SKI6	YGR195W	YML053C	Q04978	212 aa		4.97	□□□□□ -1.61
SKI6	YGR195W	DIB1	Q06819	143 aa	Predicted RBP	4.97	□□□□□ -1.61
SKI6	YGR195W	SYO1	Q07395	620 aa		4.97	□□□□□ -1.61
SKI6	YGR195W	BSC6	Q08280	497 aa		4.97	□□□□□ -1.61
SKI6	YGR195W	NFT1	P0CE68	1218 aa		4.96	□□□□□ -1.62
SKI6	YGR195W	SGV1	P23293	657 aa	Known RBP	4.96	□□□□□ -1.62
SKI6	YGR195W	MGR1	P25573	417 aa		4.96	□□□□□ -1.62
SKI6	YGR195W	PRR1	P28708	518 aa		4.96	□□□□□ -1.62
SKI6	YGR195W	SIN4	P32259	974 aa		4.96	□□□□□ -1.62
SKI6	YGR195W	BUD2	P33314	1104 aa		4.96	□□□□□ -1.62
SKI6	YGR195W	SPT10	P35208	640 aa		4.96	□□□□□ -1.62
SKI6	YGR195W	ADE17	P38009	592 aa	Known RBP	4.96	□□□□□ -1.62
SKI6	YGR195W	RRN10	P38204	145 aa		4.96	□□□□□ -1.62
SKI6	YGR195W	SPP381	P38282	291 aa	Predicted RBP	4.96	□□□□□ -1.62
SKI6	YGR195W	VBA2	P38358	474 aa	Known RBP	4.96	□□□□□ -1.62
SKI6	YGR195W	YHR182W	P38870	785 aa		4.96	□□□□□ -1.62
SKI6	YGR195W	GPI16	P38875	610 aa		4.96	□□□□□ -1.62
SKI6	YGR195W	SPG5	P42933	373 aa		4.96	□□□□□ -1.62
SKI6	YGR195W	TAX4	P47030	604 aa		4.96	□□□□□ -1.62
SKI6	YGR195W	GET4	Q12125	312 aa		4.96	□□□□□ -1.62
SKI6	YGR195W	YDR262W	Q12331	272 aa		4.96	□□□□□ -1.62
SKI6	YGR195W	RMD5	Q12508	421 aa		4.96	□□□□□ -1.62
SKI6	YGR195W	YPK9	Q12697	1472 aa		4.95	□□□□□ -1.62
SKI6	YGR195W	SCEI	P03882	235 aa		4.95	□□□□□ -1.62
SKI6	YGR195W	ADE4	P04046	510 aa	Known RBP	4.95	□□□□□ -1.62
SKI6	YGR195W	YLL053C	P0CD98	152 aa		4.95	□□□□□ -1.62
SKI6	YGR195W	DAL2	P25335	343 aa		4.95	□□□□□ -1.62
SKI6	YGR195W	GSY2	P27472	705 aa		4.95	□□□□□ -1.62
SKI6	YGR195W	FRE1	P32791	686 aa		4.95	□□□□□ -1.62
SKI6	YGR195W	YSC83	P32792	385 aa		4.95	□□□□□ -1.62
SKI6	YGR195W	SHP1	P34223	423 aa		4.95	□□□□□ -1.62
SKI6	YGR195W	OCT1	P35999	772 aa		4.95	□□□□□ -1.62
SKI6	YGR195W	CDC40	P40968	455 aa	Predicted RBP	4.95	□□□□□ -1.62
SKI6	YGR195W	YFL015C	P43578	164 aa		4.95	□□□□□ -1.62
SKI6	YGR195W	MRP51	Q02950	344 aa		4.95	□□□□□ -1.62
SKI6	YGR195W	CTS2	Q06350	511 aa		4.95	□□□□□ -1.62
SKI6	YGR195W	LSP1	Q12230	341 aa	Known RBP	4.95	□□□□□ -1.62
SKI6	YGR195W	PAA1	Q12447	191 aa	Known RBP	4.95	□□□□□ -1.62
SKI6	YGR195W	SPO24	Q3E752	67 aa		4.95	□□□□□ -1.62
SKI6	YGR195W	ECM5	Q03214	1411 aa		4.95	□□□□□ -1.62
SKI6	YGR195W	SSK22	P25390	1331 aa	Predicted RBP	4.95	□□□□□ -1.62
SKI6	YGR195W	MSF1	P08425	469 aa		4.94	□□□□□ -1.62
SKI6	YGR195W	HEM1	P09950	548 aa	Predicted RBP	4.94	□□□□□ -1.62
SKI6	YGR195W	ZIP1	P31111	875 aa		4.94	□□□□□ -1.62
SKI6	YGR195W	MRPL9	P31334	269 aa		4.94	□□□□□ -1.62
SKI6	YGR195W	RPC34	P32910	317 aa		4.94	□□□□□ -1.62
SKI6	YGR195W	QDR3	P38227	689 aa		4.94	□□□□□ -1.62
SKI6	YGR195W	EXO1	P39875	702 aa		4.94	□□□□□ -1.62
SKI6	YGR195W	GAT2	P40209	560 aa		4.94	□□□□□ -1.62
SKI6	YGR195W	BIO3	P50277	480 aa		4.94	□□□□□ -1.62
SKI6	YGR195W	SLG1	P54867	378 aa		4.94	□□□□□ -1.62
SKI6	YGR195W	MSC1	Q03104	513 aa		4.94	□□□□□ -1.62
SKI6	YGR195W	YMR178W	Q03219	274 aa	Known RBP	4.94	□□□□□ -1.62
SKI6	YGR195W	URH1	Q04179	340 aa		4.94	□□□□□ -1.62
SKI6	YGR195W	AAD15	Q08361	143 aa		4.94	□□□□□ -1.62
SKI6	YGR195W	LCB4	Q12246	624 aa		4.94	□□□□□ -1.62
SKI6	YGR195W	MYO4	P32492	1471 aa		4.94	□□□□□ -1.62
SKI6	YGR195W	COX3	P00420	269 aa		4.93	□□□□□ -1.62
SKI6	YGR195W	RAD3	P06839	778 aa		4.93	□□□□□ -1.62
SKI6	YGR195W	AQY1	P0CD91	305 aa		4.93	□□□□□ -1.62
SKI6	YGR195W	RPL18A	P0CX49	186 aa	Known RBP	4.93	□□□□□ -1.62
SKI6	YGR195W	RPL18B	P0CX50	186 aa	Known RBP	4.93	□□□□□ -1.62
SKI6	YGR195W	NHP6B	P11633	99 aa	Known RBP	4.93	□□□□□ -1.62
SKI6	YGR195W	YPK2	P18961	677 aa		4.93	□□□□□ -1.62
SKI6	YGR195W	YSR3	P23501	404 aa		4.93	□□□□□ -1.62
SKI6	YGR195W	CSM1	P25651	190 aa		4.93	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 27.9 ms