RNA–Protein interactions for RNA: YGR009C

SEC9, Transcript of t-SNARE protein required for secretory vesicle-plasma membrane fusion, yeastyeast

Gene SEC9, Length 1,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC9YGR009C YBR197CP38306 217 aa4.69□□□□□ -1.66
SEC9YGR009C BIG1P38813 335 aa4.69□□□□□ -1.66
SEC9YGR009C AIM46P38885 310 aa4.69□□□□□ -1.66
SEC9YGR009C CCT4P39078 528 aaKnown RBP4.69□□□□□ -1.66
SEC9YGR009C RBG1P39729 369 aa4.69□□□□□ -1.66
SEC9YGR009C OPT1P40897 799 aa4.69□□□□□ -1.66
SEC9YGR009C CTK3P46963 296 aaPredicted RBP4.69□□□□□ -1.66
SEC9YGR009C RPE1P46969 238 aa4.69□□□□□ -1.66
SEC9YGR009C RPA34P47006 233 aaPredicted RBP4.69□□□□□ -1.66
SEC9YGR009C YJL016WP47072 561 aa4.69□□□□□ -1.66
SEC9YGR009C COG1P53079 417 aa4.69□□□□□ -1.66
SEC9YGR009C MTQ1P53944 314 aa4.69□□□□□ -1.66
SEC9YGR009C ALG11P53954 548 aaKnown RBP4.69□□□□□ -1.66
SEC9YGR009C YMR279CQ03263 540 aa4.69□□□□□ -1.66
SEC9YGR009C OST6Q03723 332 aa4.69□□□□□ -1.66
SEC9YGR009C EKI1Q03764 534 aa4.69□□□□□ -1.66
SEC9YGR009C APC4Q04601 652 aa4.69□□□□□ -1.66
SEC9YGR009C PAL1Q05518 499 aaKnown RBP4.69□□□□□ -1.66
SEC9YGR009C RRG8Q06109 277 aa4.69□□□□□ -1.66
SEC9YGR009C TUM1Q08686 304 aaKnown RBP4.69□□□□□ -1.66
SEC9YGR009C RIM20Q12033 661 aa4.69□□□□□ -1.66
SEC9YGR009C YOR022CQ12204 715 aa4.69□□□□□ -1.66
SEC9YGR009C SFG1Q12507 346 aa4.69□□□□□ -1.66
SEC9YGR009C YLR361C-AQ3E795 98 aa4.69□□□□□ -1.66
SEC9YGR009C QCR7P00128 127 aa4.69□□□□□ -1.66
SEC9YGR009C YMR085WP0CF18 432 aa4.69□□□□□ -1.66
SEC9YGR009C PYC1P11154 1178 aaKnown RBP4.69□□□□□ -1.66
SEC9YGR009C YPK1P12688 680 aaKnown RBP4.69□□□□□ -1.66
SEC9YGR009C PEP5P12868 1029 aa4.69□□□□□ -1.66
SEC9YGR009C BET2P20133 325 aa4.69□□□□□ -1.66
SEC9YGR009C RPO26P20435 155 aa4.69□□□□□ -1.66
SEC9YGR009C ATP12P22135 325 aa4.69□□□□□ -1.66
SEC9YGR009C RNA14P25298 677 aaKnown RBP4.69□□□□□ -1.66
SEC9YGR009C PRR1P28708 518 aa4.69□□□□□ -1.66
SEC9YGR009C PTC1P35182 281 aa4.69□□□□□ -1.66
SEC9YGR009C NTR2P36118 322 aaPredicted RBP4.69□□□□□ -1.66
SEC9YGR009C MAL33P38157 468 aa4.69□□□□□ -1.66
SEC9YGR009C NPP2P39997 493 aa4.69□□□□□ -1.66
SEC9YGR009C ORC5P50874 479 aa4.69□□□□□ -1.66
SEC9YGR009C SBH2P52871 88 aa4.69□□□□□ -1.66
SEC9YGR009C TAD1P53065 400 aa4.69□□□□□ -1.66
SEC9YGR009C VPS62P53285 467 aa4.69□□□□□ -1.66
SEC9YGR009C RSM27P53305 110 aa4.69□□□□□ -1.66
SEC9YGR009C YNL115CP53925 644 aa4.69□□□□□ -1.66
SEC9YGR009C YDR249CQ03787 373 aa4.69□□□□□ -1.66
SEC9YGR009C YLR225CQ05948 407 aaKnown RBP4.69□□□□□ -1.66
SEC9YGR009C RIF2Q06208 395 aa4.69□□□□□ -1.66
SEC9YGR009C ATG33Q06485 197 aa4.69□□□□□ -1.66
SEC9YGR009C NSE1Q07913 336 aa4.69□□□□□ -1.66
SEC9YGR009C YOP1Q12402 180 aa4.69□□□□□ -1.66
SEC9YGR009C EFG1Q3E705 233 aaKnown RBP4.69□□□□□ -1.66
SEC9YGR009C RGS2Q99188 309 aa4.69□□□□□ -1.66
SEC9YGR009C CMD1P06787 147 aaKnown RBP4.68□□□□□ -1.66
SEC9YGR009C SPS4P09937 338 aa4.68□□□□□ -1.66
SEC9YGR009C INO1P11986 533 aa4.68□□□□□ -1.66
SEC9YGR009C YUR1P26725 428 aa4.68□□□□□ -1.66
SEC9YGR009C CDC13P32797 924 aaKnown RBP4.68□□□□□ -1.66
SEC9YGR009C PIN4P34217 668 aaKnown RBP RIP-Chip data4.68□□□□□ -1.66not detected
SEC9YGR009C SHG1P38337 142 aa4.68□□□□□ -1.66
SEC9YGR009C HRB1P38922 454 aaKnown RBP RIP-Chip data4.68□□□□□ -1.66not detected
SEC9YGR009C SRP14P38985 146 aa4.68□□□□□ -1.66
SEC9YGR009C ERG28P40030 148 aa4.68□□□□□ -1.66
SEC9YGR009C IDP2P41939 412 aa4.68□□□□□ -1.66
SEC9YGR009C BNA2P47125 453 aa4.68□□□□□ -1.66
SEC9YGR009C ECM27P47144 725 aa4.68□□□□□ -1.66
SEC9YGR009C PEX13P80667 386 aa4.68□□□□□ -1.66
SEC9YGR009C SSK1Q07084 712 aa4.68□□□□□ -1.66
SEC9YGR009C SLF1Q12034 447 aaKnown RBP4.68□□□□□ -1.66
SEC9YGR009C REV3P14284 1504 aa4.67□□□□□ -1.66
SEC9YGR009C HTB1P02293 131 aaKnown RBP4.67□□□□□ -1.66
SEC9YGR009C HTB2P02294 131 aa4.67□□□□□ -1.66
SEC9YGR009C CDC7P06243 507 aa4.67□□□□□ -1.66
SEC9YGR009C STE18P18852 110 aa4.67□□□□□ -1.66
SEC9YGR009C YCK1P23291 538 aa4.67□□□□□ -1.66
SEC9YGR009C HXT2P23585 541 aa4.67□□□□□ -1.66
SEC9YGR009C SEC65P29478 273 aa4.67□□□□□ -1.66
SEC9YGR009C ISC10P32645 267 aa4.67□□□□□ -1.66
SEC9YGR009C MDL2P33311 773 aa4.67□□□□□ -1.66
SEC9YGR009C LHP1P33399 275 aaKnown RBP4.67□□□□□ -1.66
SEC9YGR009C SKG1P36169 355 aa4.67□□□□□ -1.66
SEC9YGR009C RRT2P38332 387 aa4.67□□□□□ -1.66
SEC9YGR009C ERG7P38604 731 aa4.67□□□□□ -1.66
SEC9YGR009C MLH1P38920 769 aa4.67□□□□□ -1.66
SEC9YGR009C PFK26P40433 827 aaKnown RBP4.67□□□□□ -1.66
SEC9YGR009C PRK1P40494 810 aa4.67□□□□□ -1.66
SEC9YGR009C MAM33P40513 266 aa4.67□□□□□ -1.66
SEC9YGR009C CFD1P40558 293 aa4.67□□□□□ -1.66
SEC9YGR009C LSB6P42951 607 aa4.67□□□□□ -1.66
SEC9YGR009C RIB4P50861 169 aaPredicted RBP4.67□□□□□ -1.66
SEC9YGR009C YGL114WP53134 725 aa4.67□□□□□ -1.66
SEC9YGR009C YGL082WP53155 381 aa4.67□□□□□ -1.66
SEC9YGR009C YNR065CP53751 1116 aa4.67□□□□□ -1.66
SEC9YGR009C YNR066CP53752 436 aa4.67□□□□□ -1.66
SEC9YGR009C ARG5,6Q01217 863 aa4.67□□□□□ -1.66
SEC9YGR009C AAT1Q01802 451 aa4.67□□□□□ -1.66
SEC9YGR009C SNO1Q03144 224 aa4.67□□□□□ -1.66
SEC9YGR009C TRM82Q03774 444 aa4.67□□□□□ -1.66
SEC9YGR009C TIF35Q04067 274 aaKnown RBP4.67□□□□□ -1.66
SEC9YGR009C PPN1Q04119 674 aa4.67□□□□□ -1.66
SEC9YGR009C YFH1Q07540 174 aa4.67□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms