RNA–Protein interactions for RNA: YDR073W

SNF11, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SNF11, Length 510 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF11	YDR073W	RRI1	Q12468	440 aa		5.32	□□□□□ -1.56
SNF11	YDR073W	DCP1	Q12517	231 aa	Predicted RBP	5.32	□□□□□ -1.56
SNF11	YDR073W	OPI3	P05375	206 aa		5.31	□□□□□ -1.56
SNF11	YDR073W	SSA3	P09435	649 aa	Known RBP	5.31	□□□□□ -1.56
SNF11	YDR073W	UNG1	P12887	359 aa		5.31	□□□□□ -1.56
SNF11	YDR073W	YCR007C	P25354	239 aa		5.31	□□□□□ -1.56
SNF11	YDR073W	RPS2	P25443	254 aa	Known RBP	5.31	□□□□□ -1.56
SNF11	YDR073W	MSK1	P32048	576 aa		5.31	□□□□□ -1.56
SNF11	YDR073W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	5.31	□□□□□ -1.56	not detected
SNF11	YDR073W	YAL037W	P39728	267 aa		5.31	□□□□□ -1.56
SNF11	YDR073W	MMF1	P40185	145 aa	Known RBP	5.31	□□□□□ -1.56
SNF11	YDR073W	HMS2	P47175	358 aa		5.31	□□□□□ -1.56
SNF11	YDR073W	MND1	P53102	219 aa		5.31	□□□□□ -1.56
SNF11	YDR073W	NUP100	Q02629	959 aa		5.31	□□□□□ -1.56
SNF11	YDR073W	MMT1	Q03218	510 aa		5.31	□□□□□ -1.56
SNF11	YDR073W	URH1	Q04179	340 aa		5.31	□□□□□ -1.56
SNF11	YDR073W	YMR087W	Q04299	284 aa		5.31	□□□□□ -1.56
SNF11	YDR073W	ERV41	Q04651	352 aa		5.31	□□□□□ -1.56
SNF11	YDR073W	SYO1	Q07395	620 aa		5.31	□□□□□ -1.56
SNF11	YDR073W	ATG34	Q12292	412 aa		5.31	□□□□□ -1.56
SNF11	YDR073W	RKM5	Q12367	367 aa		5.31	□□□□□ -1.56
SNF11	YDR073W	BUB3	P26449	341 aa		5.3	□□□□□ -1.56
SNF11	YDR073W	YPS1	P32329	569 aa		5.3	□□□□□ -1.56
SNF11	YDR073W	MRP4	P32902	394 aa		5.3	□□□□□ -1.56
SNF11	YDR073W	TPO5	P36029	618 aa		5.3	□□□□□ -1.56
SNF11	YDR073W	PHD1	P36093	366 aa		5.3	□□□□□ -1.56
SNF11	YDR073W	YBR056W	P38081	501 aa		5.3	□□□□□ -1.56
SNF11	YDR073W	RTC2	P38279	296 aa		5.3	□□□□□ -1.56
SNF11	YDR073W	YGL185C	P53100	379 aa		5.3	□□□□□ -1.56
SNF11	YDR073W	LSB1	P53281	241 aa		5.3	□□□□□ -1.56
SNF11	YDR073W	GPI15	P53961	229 aa		5.3	□□□□□ -1.56
SNF11	YDR073W	MPS1	P54199	764 aa		5.3	□□□□□ -1.56
SNF11	YDR073W	MRP51	Q02950	344 aa		5.3	□□□□□ -1.56
SNF11	YDR073W	SLD5	Q03406	294 aa		5.3	□□□□□ -1.56
SNF11	YDR073W	SAC3	P46674	1301 aa		5.29	□□□□□ -1.56
SNF11	YDR073W	RPL12A	P0CX53	165 aa	Known RBP	5.29	□□□□□ -1.56
SNF11	YDR073W	RPL12B	P0CX54	165 aa		5.29	□□□□□ -1.56
SNF11	YDR073W	URE2	P23202	354 aa	Known RBP	5.29	□□□□□ -1.56
SNF11	YDR073W	DBR1	P24309	405 aa	Known RBP	5.29	□□□□□ -1.56
SNF11	YDR073W	CTR86	P25355	563 aa		5.29	□□□□□ -1.56
SNF11	YDR073W	COQ3	P27680	312 aa		5.29	□□□□□ -1.56
SNF11	YDR073W	RIM2	P38127	377 aa		5.29	□□□□□ -1.56
SNF11	YDR073W	CTM1	P38818	585 aa		5.29	□□□□□ -1.56
SNF11	YDR073W	YHR122W	P38829	231 aa		5.29	□□□□□ -1.56
SNF11	YDR073W	TOS3	P43637	560 aa		5.29	□□□□□ -1.56
SNF11	YDR073W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	5.29	□□□□□ -1.56	not detected
SNF11	YDR073W	ATP23	P53722	227 aa		5.29	□□□□□ -1.56
SNF11	YDR073W	CAC2	Q04199	468 aa		5.29	□□□□□ -1.56
SNF11	YDR073W	SEG1	Q04279	960 aa		5.29	□□□□□ -1.56
SNF11	YDR073W	APC4	Q04601	652 aa		5.29	□□□□□ -1.56
SNF11	YDR073W	SNT309	Q06091	175 aa	Predicted RBP	5.29	□□□□□ -1.56
SNF11	YDR073W	NRT1	Q08485	598 aa		5.29	□□□□□ -1.56
SNF11	YDR073W	PKH2	Q12236	1081 aa	Known RBP	5.29	□□□□□ -1.56
SNF11	YDR073W	YDR262W	Q12331	272 aa		5.29	□□□□□ -1.56
SNF11	YDR073W	ARP6	Q12509	438 aa		5.29	□□□□□ -1.56
SNF11	YDR073W	FSH3	Q99369	266 aa		5.29	□□□□□ -1.56
SNF11	YDR073W	YPT1	P01123	206 aa	Known RBP	5.28	□□□□□ -1.56
SNF11	YDR073W	EXO70	P19658	623 aa		5.28	□□□□□ -1.56
SNF11	YDR073W	BUD2	P33314	1104 aa		5.28	□□□□□ -1.56
SNF11	YDR073W	SKN1	P33336	771 aa		5.28	□□□□□ -1.56
SNF11	YDR073W	OAR1	P35731	278 aa		5.28	□□□□□ -1.56
SNF11	YDR073W	DOA1	P36037	715 aa		5.28	□□□□□ -1.56
SNF11	YDR073W	RSM22	P36056	628 aa		5.28	□□□□□ -1.56
SNF11	YDR073W	HOT13	P36078	116 aa		5.28	□□□□□ -1.56
SNF11	YDR073W	MOH1	P38191	138 aa		5.28	□□□□□ -1.56
SNF11	YDR073W	ISC1	P40015	477 aa	Known RBP	5.28	□□□□□ -1.56
SNF11	YDR073W	LOH1	P47055	219 aa		5.28	□□□□□ -1.56
SNF11	YDR073W	PMT5	P52867	743 aa		5.28	□□□□□ -1.56
SNF11	YDR073W	YIP1	P53039	248 aa		5.28	□□□□□ -1.56
SNF11	YDR073W	TY3A-G	Q12173	290 aa		5.28	□□□□□ -1.56
SNF11	YDR073W	LDB17	Q12342	491 aa		5.28	□□□□□ -1.56
SNF11	YDR073W	RGS2	Q99188	309 aa		5.28	□□□□□ -1.56
SNF11	YDR073W	TY3A-I	Q99219	290 aa		5.28	□□□□□ -1.56
SNF11	YDR073W	ARF1	P11076	181 aa	Known RBP	5.27	□□□□□ -1.57
SNF11	YDR073W	HNM1	P19807	563 aa		5.27	□□□□□ -1.57
SNF11	YDR073W	MGR1	P25573	417 aa		5.27	□□□□□ -1.57
SNF11	YDR073W	YCL068C	P25593	260 aa		5.27	□□□□□ -1.57
SNF11	YDR073W	CIN8	P27895	1000 aa		5.27	□□□□□ -1.57
SNF11	YDR073W	FRE1	P32791	686 aa		5.27	□□□□□ -1.57
SNF11	YDR073W	COX13	P32799	129 aa		5.27	□□□□□ -1.57
SNF11	YDR073W	YNK1	P36010	153 aa	Known RBP	5.27	□□□□□ -1.57
SNF11	YDR073W	YCR041W	P37265	110 aa		5.27	□□□□□ -1.57
SNF11	YDR073W	YMR262W	P38430	313 aa		5.27	□□□□□ -1.57
SNF11	YDR073W	LYS1	P38998	373 aa	RIP-Chip data	5.27	□□□□□ -1.57	not detected
SNF11	YDR073W	PHB2	P50085	310 aa		5.27	□□□□□ -1.57
SNF11	YDR073W	YGL242C	P53066	181 aa		5.27	□□□□□ -1.57
SNF11	YDR073W	RET3	P53600	189 aa		5.27	□□□□□ -1.57
SNF11	YDR073W	AIM33	Q04516	312 aa		5.27	□□□□□ -1.57
SNF11	YDR073W	AIM45	Q12480	344 aa	Known RBP	5.27	□□□□□ -1.57
SNF11	YDR073W	CHD1	P32657	1468 aa		5.26	□□□□□ -1.57
SNF11	YDR073W	CAR2	P07991	424 aa	Known RBP	5.26	□□□□□ -1.57
SNF11	YDR073W	YAR066W	P0CX18	203 aa		5.26	□□□□□ -1.57
SNF11	YDR073W	YHR214W	P0CX19	203 aa		5.26	□□□□□ -1.57
SNF11	YDR073W	CLN3	P13365	580 aa		5.26	□□□□□ -1.57
SNF11	YDR073W	MEK1	P24719	497 aa	Predicted RBP	5.26	□□□□□ -1.57
SNF11	YDR073W	ICL1	P28240	557 aa	Predicted RBP	5.26	□□□□□ -1.57
SNF11	YDR073W	ACH1	P32316	526 aa		5.26	□□□□□ -1.57
SNF11	YDR073W	OSH3	P38713	996 aa	Known RBP	5.26	□□□□□ -1.57
SNF11	YDR073W	PET100	P38958	111 aa		5.26	□□□□□ -1.57
SNF11	YDR073W	LYS12	P40495	371 aa	Known RBP	5.26	□□□□□ -1.57

Retrieved 100 of 5,963 RNA–protein pairs in 21.4 ms