RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 ZNF618Q5T7W0 954 aa8.35□□□□□ -1.07
SCAMP1-206ENST00000618166 CCDC155Q8N6L0 562 aa8.35□□□□□ -1.07
SCAMP1-206ENST00000618166 GPR161Q8N6U8 529 aaKnown RBP8.35□□□□□ -1.07
SCAMP1-206ENST00000618166 TOP1MTQ969P6 601 aa8.35□□□□□ -1.07
SCAMP1-206ENST00000618166 S1PR5Q9H228 398 aa8.35□□□□□ -1.07
SCAMP1-206ENST00000618166 RAVER2Q9HCJ3 691 aaKnown RBP8.35□□□□□ -1.07
SCAMP1-206ENST00000618166 ERVK-5Q9HDB9 667 aa8.35□□□□□ -1.07
SCAMP1-206ENST00000618166 HOMER2Q9NSB8 354 aa8.35□□□□□ -1.07
SCAMP1-206ENST00000618166 USP18Q9UMW8 372 aa8.35□□□□□ -1.07
SCAMP1-206ENST00000618166 Q9Y3F1 56 aa8.35□□□□□ -1.07
SCAMP1-206ENST00000618166 SCN10AQ9Y5Y9 1956 aa8.35□□□□□ -1.07
SCAMP1-206ENST00000618166 IGF2RP11717 2491 aa8.35□□□□□ -1.07
SCAMP1-206ENST00000618166 MICAL3Q7RTP6 2002 aa8.35□□□□□ -1.07
SCAMP1-206ENST00000618166 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.35□□□□□ -1.07
SCAMP1-206ENST00000618166 TAF4O00268 1085 aa8.35□□□□□ -1.07
SCAMP1-206ENST00000618166 RAD21O60216 631 aa8.35□□□□□ -1.07
SCAMP1-206ENST00000618166 VAMP4O75379 141 aa8.35□□□□□ -1.07
SCAMP1-206ENST00000618166 MS4A1P11836 297 aa8.35□□□□□ -1.07
SCAMP1-206ENST00000618166 PTPRNQ16849 979 aa8.35□□□□□ -1.07
SCAMP1-206ENST00000618166 SOWAHCQ53LP3 525 aaPredicted RBP8.35□□□□□ -1.07
SCAMP1-206ENST00000618166 N4BP2L1Q5TBK1 243 aaPredicted RBP8.35□□□□□ -1.07
SCAMP1-206ENST00000618166 IQSEC1Q6DN90 963 aa8.35□□□□□ -1.07
SCAMP1-206ENST00000618166 KIAA1211Q6ZU35 1233 aa8.35□□□□□ -1.07
SCAMP1-206ENST00000618166 FIBCD1Q8N539 461 aa8.35□□□□□ -1.07
SCAMP1-206ENST00000618166 MIGA1Q8NAN2 632 aa8.35□□□□□ -1.07
SCAMP1-206ENST00000618166 ZNF511Q8NB15 262 aa8.35□□□□□ -1.07
SCAMP1-206ENST00000618166 SNRKQ9NRH2 765 aa8.35□□□□□ -1.07
SCAMP1-206ENST00000618166 PLAGL2Q9UPG8 496 aa8.35□□□□□ -1.07
SCAMP1-206ENST00000618166 DMXL2Q8TDJ6 3036 aa8.34□□□□□ -1.07
SCAMP1-206ENST00000618166 LAMA5O15230 3695 aa8.34□□□□□ -1.07
SCAMP1-206ENST00000618166 CIAO1O76071 339 aa8.34□□□□□ -1.07
SCAMP1-206ENST00000618166 RB1P06400 928 aa8.34□□□□□ -1.07
SCAMP1-206ENST00000618166 USP5P45974 858 aa8.34□□□□□ -1.07
SCAMP1-206ENST00000618166 ICA1Q05084 483 aa8.34□□□□□ -1.07
SCAMP1-206ENST00000618166 GABPAQ06546 454 aa8.34□□□□□ -1.07
SCAMP1-206ENST00000618166 RBL2Q08999 1139 aa8.34□□□□□ -1.07
SCAMP1-206ENST00000618166 TRIM71Q2Q1W2 868 aaKnown RBP8.34□□□□□ -1.07
SCAMP1-206ENST00000618166 DUSP28Q4G0W2 176 aa8.34□□□□□ -1.07
SCAMP1-206ENST00000618166 SPECC1Q5M775 1068 aa8.34□□□□□ -1.07
SCAMP1-206ENST00000618166 ZNF385CQ66K41 422 aaPredicted RBP8.34□□□□□ -1.07
SCAMP1-206ENST00000618166 ZC3H14Q6PJT7 736 aaKnown RBP8.34□□□□□ -1.07
SCAMP1-206ENST00000618166 SIX5Q8N196 739 aa8.34□□□□□ -1.07
SCAMP1-206ENST00000618166 ATP8B4Q8TF62 1192 aa8.34□□□□□ -1.07
SCAMP1-206ENST00000618166 COPS5Q92905 334 aa8.34□□□□□ -1.07
SCAMP1-206ENST00000618166 RTP3Q9BQQ7 232 aa8.34□□□□□ -1.07
SCAMP1-206ENST00000618166 IFIH1Q9BYX4 1025 aaKnown RBP8.34□□□□□ -1.07
SCAMP1-206ENST00000618166 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.34□□□□□ -1.07
SCAMP1-206ENST00000618166 IL16Q14005 1332 aa8.33□□□□□ -1.08
SCAMP1-206ENST00000618166 MYH1P12882 1939 aa8.33□□□□□ -1.08
SCAMP1-206ENST00000618166 SRRM3A6NNA2 597 aaPredicted RBP8.33□□□□□ -1.08
SCAMP1-206ENST00000618166 ITGB1P05556 798 aa8.33□□□□□ -1.08
SCAMP1-206ENST00000618166 AKR1B1P15121 316 aa8.33□□□□□ -1.08
SCAMP1-206ENST00000618166 CPT1AP50416 773 aa8.33□□□□□ -1.08
SCAMP1-206ENST00000618166 SHC2P98077 582 aa8.33□□□□□ -1.08
SCAMP1-206ENST00000618166 PTPN11Q06124 597 aaPredicted RBP8.33□□□□□ -1.08
SCAMP1-206ENST00000618166 KCNH2Q12809 1159 aa8.33□□□□□ -1.08
SCAMP1-206ENST00000618166 WDR43Q15061 677 aaKnown RBP eCLIP8.33□□□□□ -1.08
SCAMP1-206ENST00000618166 SYCE2Q6PIF2 218 aa8.33□□□□□ -1.08
SCAMP1-206ENST00000618166 UNQ6494/PRO21346Q6UXR6 183 aa8.33□□□□□ -1.08
SCAMP1-206ENST00000618166 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.33□□□□□ -1.08
SCAMP1-206ENST00000618166 OR6J1Q8NGC5 347 aa8.33□□□□□ -1.08
SCAMP1-206ENST00000618166 IL17RAQ96F46 866 aa8.33□□□□□ -1.08
SCAMP1-206ENST00000618166 POMKQ9H5K3 350 aa8.33□□□□□ -1.08
SCAMP1-206ENST00000618166 ARHGEF10LQ9HCE6 1279 aa8.33□□□□□ -1.08
SCAMP1-206ENST00000618166 LIMD1Q9UGP4 676 aa8.33□□□□□ -1.08
SCAMP1-206ENST00000618166 TENM4Q6N022 2769 aa8.32□□□□□ -1.08
SCAMP1-206ENST00000618166 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.32□□□□□ -1.08
SCAMP1-206ENST00000618166 ASB14A6NK59 587 aa8.32□□□□□ -1.08
SCAMP1-206ENST00000618166 SLC30A4O14863 429 aa8.32□□□□□ -1.08
SCAMP1-206ENST00000618166 KINO60870 393 aaKnown RBP8.32□□□□□ -1.08
SCAMP1-206ENST00000618166 DCNP07585 359 aaKnown RBP8.32□□□□□ -1.08
SCAMP1-206ENST00000618166 CYP2D6P10635 497 aa8.32□□□□□ -1.08
SCAMP1-206ENST00000618166 IL15P40933 162 aaPredicted RBP8.32□□□□□ -1.08
SCAMP1-206ENST00000618166 MVPQ14764 893 aaKnown RBP8.32□□□□□ -1.08
SCAMP1-206ENST00000618166 C6orf118Q5T5N4 469 aa8.32□□□□□ -1.08
SCAMP1-206ENST00000618166 TMEM179Q6ZVK1 233 aa8.32□□□□□ -1.08
SCAMP1-206ENST00000618166 TTC6Q86TZ1 520 aa8.32□□□□□ -1.08
SCAMP1-206ENST00000618166 MAML2Q8IZL2 1156 aaPredicted RBP8.32□□□□□ -1.08
SCAMP1-206ENST00000618166 SPPL3Q8TCT6 385 aa8.32□□□□□ -1.08
SCAMP1-206ENST00000618166 DYNLL2Q96FJ2 89 aa8.32□□□□□ -1.08
SCAMP1-206ENST00000618166 CDK15Q96Q40 435 aa8.32□□□□□ -1.08
SCAMP1-206ENST00000618166 SLF1Q9BQI6 1058 aa8.32□□□□□ -1.08
SCAMP1-206ENST00000618166 WDR11Q9BZH6 1224 aa8.32□□□□□ -1.08
SCAMP1-206ENST00000618166 USP44Q9H0E7 712 aa8.32□□□□□ -1.08
SCAMP1-206ENST00000618166 ZFAND3Q9H8U3 227 aa8.32□□□□□ -1.08
SCAMP1-206ENST00000618166 A1CFQ9NQ94 594 aaKnown RBP8.32□□□□□ -1.08
SCAMP1-206ENST00000618166 AKAP13Q12802 2813 aa8.32□□□□□ -1.08
SCAMP1-206ENST00000618166 COL4A3Q01955 1670 aa8.31□□□□□ -1.08
SCAMP1-206ENST00000618166 IGSF10Q6WRI0 2623 aa8.31□□□□□ -1.08
SCAMP1-206ENST00000618166 PARNO95453 639 aaKnown RBP8.31□□□□□ -1.08
SCAMP1-206ENST00000618166 WEE2P0C1S8 567 aa8.31□□□□□ -1.08
SCAMP1-206ENST00000618166 EEF2P13639 858 aaKnown RBP8.31□□□□□ -1.08
SCAMP1-206ENST00000618166 ARID4AP29374 1257 aaPredicted RBP8.31□□□□□ -1.08
SCAMP1-206ENST00000618166 TECP42680 631 aa8.31□□□□□ -1.08
SCAMP1-206ENST00000618166 TFCP2Q12800 502 aa8.31□□□□□ -1.08
SCAMP1-206ENST00000618166 PLEKHG4Q58EX7 1191 aa8.31□□□□□ -1.08
SCAMP1-206ENST00000618166 PRR23BQ6ZRT6 265 aa8.31□□□□□ -1.08
SCAMP1-206ENST00000618166 KDF1Q8NAX2 398 aaPredicted RBP8.31□□□□□ -1.08
SCAMP1-206ENST00000618166 POF1BQ8WVV4 589 aa8.31□□□□□ -1.08
SCAMP1-206ENST00000618166 CLP1Q92989 425 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms