RNA–Protein interactions for RNA: ENST00000604609.2

GDF15-205, Transcript of growth differentiation factor 15, humanhuman

TSL 3

Gene GDF15, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF15-205ENST00000604609 RIT2Q99578 217 aa11.13□□□□□ -0.63
GDF15-205ENST00000604609 SDF4Q9BRK5 362 aa11.13□□□□□ -0.63
GDF15-205ENST00000604609 C16orf70Q9BSU1 422 aa11.13□□□□□ -0.63
GDF15-205ENST00000604609 TEKT3Q9BXF9 490 aa11.13□□□□□ -0.63
GDF15-205ENST00000604609 TTC12Q9H892 705 aaPredicted RBP11.13□□□□□ -0.63
GDF15-205ENST00000604609 RGL1Q9NZL6 768 aa11.13□□□□□ -0.63
GDF15-205ENST00000604609 FBXO2Q9UK22 296 aaPredicted RBP11.13□□□□□ -0.63
GDF15-205ENST00000604609 MYH6P13533 1939 aa11.12□□□□□ -0.63
GDF15-205ENST00000604609 VWA3AA6NCI4 1184 aa11.12□□□□□ -0.63
GDF15-205ENST00000604609 NOP56O00567 594 aaKnown RBP11.12□□□□□ -0.63
GDF15-205ENST00000604609 NKRFO15226 690 aaKnown RBP eCLIP11.12□□□□□ -0.63
GDF15-205ENST00000604609 MAFGO15525 162 aa11.12□□□□□ -0.63
GDF15-205ENST00000604609 MARCH6O60337 910 aa11.12□□□□□ -0.63
GDF15-205ENST00000604609 LGALS2P05162 132 aa11.12□□□□□ -0.63
GDF15-205ENST00000604609 ASGR1P07306 291 aa11.12□□□□□ -0.63
GDF15-205ENST00000604609 HOXD8P13378 290 aaPredicted RBP11.12□□□□□ -0.63
GDF15-205ENST00000604609 NCLP19338 710 aaKnown RBP11.12□□□□□ -0.63
GDF15-205ENST00000604609 ATP4AP20648 1035 aa11.12□□□□□ -0.63
GDF15-205ENST00000604609 NASPP49321 788 aaPredicted RBP11.12□□□□□ -0.63
GDF15-205ENST00000604609 ACLYP53396 1101 aa11.12□□□□□ -0.63
GDF15-205ENST00000604609 NKX3-2P78367 333 aa11.12□□□□□ -0.63
GDF15-205ENST00000604609 PURAQ00577 322 aaKnown RBP11.12□□□□□ -0.63
GDF15-205ENST00000604609 CYP4A11Q02928 519 aa11.12□□□□□ -0.63
GDF15-205ENST00000604609 ECM1Q16610 540 aa11.12□□□□□ -0.63
GDF15-205ENST00000604609 SWSAP1Q6NVH7 229 aa11.12□□□□□ -0.63
GDF15-205ENST00000604609 KCNV1Q6PIU1 500 aa11.12□□□□□ -0.63
GDF15-205ENST00000604609 LINC00301Q8NCQ3 95 aa11.12□□□□□ -0.63
GDF15-205ENST00000604609 LRRC15Q8TF66 581 aa11.12□□□□□ -0.63
GDF15-205ENST00000604609 TNPO1Q92973 898 aaKnown RBP11.12□□□□□ -0.63
GDF15-205ENST00000604609 SH2D3AQ9BRG2 576 aa11.12□□□□□ -0.63
GDF15-205ENST00000604609 TMEM106CQ9BVX2 250 aa11.12□□□□□ -0.63
GDF15-205ENST00000604609 DISC1Q9NRI5 854 aa11.12□□□□□ -0.63
GDF15-205ENST00000604609 CHMP5Q9NZZ3 219 aa11.12□□□□□ -0.63
GDF15-205ENST00000604609 ELP1O95163 1332 aa11.11□□□□□ -0.63
GDF15-205ENST00000604609 PLXNA1Q9UIW2 1896 aa11.11□□□□□ -0.63
GDF15-205ENST00000604609 A0A1W2PQ45 241 aaPredicted RBP11.11□□□□□ -0.63
GDF15-205ENST00000604609 A0A1W2PQY0 241 aa11.11□□□□□ -0.63
GDF15-205ENST00000604609 ZBTB39O15060 712 aa11.11□□□□□ -0.63
GDF15-205ENST00000604609 TBX3O15119 743 aa11.11□□□□□ -0.63
GDF15-205ENST00000604609 ZNF862O60290 1169 aa11.11□□□□□ -0.63
GDF15-205ENST00000604609 MSCO60682 206 aa11.11□□□□□ -0.63
GDF15-205ENST00000604609 ATG7O95352 703 aa11.11□□□□□ -0.63
GDF15-205ENST00000604609 SUPT20HL2P0C7V6 817 aa11.11□□□□□ -0.63
GDF15-205ENST00000604609 CST5P28325 142 aaPredicted RBP11.11□□□□□ -0.63
GDF15-205ENST00000604609 ATN1P54259 1190 aaPredicted RBP11.11□□□□□ -0.63
GDF15-205ENST00000604609 NUCB2P80303 420 aa11.11□□□□□ -0.63
GDF15-205ENST00000604609 PPP2R5CQ13362 524 aa11.11□□□□□ -0.63
GDF15-205ENST00000604609 CTTNQ14247 550 aaKnown RBP11.11□□□□□ -0.63
GDF15-205ENST00000604609 MIER3Q7Z3K6 550 aa11.11□□□□□ -0.63
GDF15-205ENST00000604609 DYDC2Q96IM9 177 aa11.11□□□□□ -0.63
GDF15-205ENST00000604609 PAWRQ96IZ0 340 aaKnown RBP11.11□□□□□ -0.63
GDF15-205ENST00000604609 FAM20AQ96MK3 541 aa11.11□□□□□ -0.63
GDF15-205ENST00000604609 PLIN2Q99541 437 aa11.11□□□□□ -0.63
GDF15-205ENST00000604609 NAP1L4Q99733 375 aaKnown RBP11.11□□□□□ -0.63
GDF15-205ENST00000604609 MMTAG2Q9BU76 263 aaKnown RBP11.11□□□□□ -0.63
GDF15-205ENST00000604609 RNPEPQ9H4A4 650 aa11.11□□□□□ -0.63
GDF15-205ENST00000604609 TBC1D22BQ9NU19 505 aa11.11□□□□□ -0.63
GDF15-205ENST00000604609 GABBR1Q9UBS5 961 aa11.11□□□□□ -0.63
GDF15-205ENST00000604609 CIZ1Q9ULV3 898 aaPredicted RBP11.11□□□□□ -0.63
GDF15-205ENST00000604609 PCDHA12Q9UN75 941 aa11.11□□□□□ -0.63
GDF15-205ENST00000604609 Q9Y3F1 56 aa11.11□□□□□ -0.63
GDF15-205ENST00000604609 MCM3APO60318 1980 aa11.1□□□□□ -0.63
GDF15-205ENST00000604609 IGKV6D-21A0A0A0MT36 114 aa11.1□□□□□ -0.63
GDF15-205ENST00000604609 DNM1LO00429 736 aa11.1□□□□□ -0.63
GDF15-205ENST00000604609 BACH1O14867 736 aa11.1□□□□□ -0.63
GDF15-205ENST00000604609 MED24O75448 989 aa11.1□□□□□ -0.63
GDF15-205ENST00000604609 STBD1O95210 358 aa11.1□□□□□ -0.63
GDF15-205ENST00000604609 SPATA31C1P0DKV0 1188 aa11.1□□□□□ -0.63
GDF15-205ENST00000604609 COL6A1P12109 1028 aa11.1□□□□□ -0.63
GDF15-205ENST00000604609 CPT1AP50416 773 aa11.1□□□□□ -0.63
GDF15-205ENST00000604609 ZNF200P98182 395 aaPredicted RBP11.1□□□□□ -0.63
GDF15-205ENST00000604609 KRT76Q01546 638 aa11.1□□□□□ -0.63
GDF15-205ENST00000604609 SLC39A14Q15043 492 aa11.1□□□□□ -0.63
GDF15-205ENST00000604609 STK38Q15208 465 aa11.1□□□□□ -0.63
GDF15-205ENST00000604609 ZNF746Q6NUN9 644 aaPredicted RBP11.1□□□□□ -0.63
GDF15-205ENST00000604609 UBE2Q1Q7Z7E8 422 aa11.1□□□□□ -0.63
GDF15-205ENST00000604609 RNF180Q86T96 592 aa11.1□□□□□ -0.63
GDF15-205ENST00000604609 ZNF579Q8NAF0 562 aaKnown RBP11.1□□□□□ -0.63
GDF15-205ENST00000604609 LEO1Q8WVC0 666 aaPredicted RBP11.1□□□□□ -0.63
GDF15-205ENST00000604609 TRAPPC12Q8WVT3 735 aa11.1□□□□□ -0.63
GDF15-205ENST00000604609 SEPT1Q8WYJ6 367 aa11.1□□□□□ -0.63
GDF15-205ENST00000604609 SENP6Q9GZR1 1112 aaPredicted RBP11.1□□□□□ -0.63
GDF15-205ENST00000604609 CSRNP2Q9H175 543 aa11.1□□□□□ -0.63
GDF15-205ENST00000604609 POLR3EQ9NVU0 708 aa11.1□□□□□ -0.63
GDF15-205ENST00000604609 PHF24Q9UPV7 400 aa11.1□□□□□ -0.63
GDF15-205ENST00000604609 SAMM50Q9Y512 469 aa11.1□□□□□ -0.63
GDF15-205ENST00000604609 ZNFX1Q9P2E3 1918 aaKnown RBP11.09□□□□□ -0.63
GDF15-205ENST00000604609 POTEB3A0JP26 581 aa11.09□□□□□ -0.63
GDF15-205ENST00000604609 WDR64B1ANS9 1081 aa11.09□□□□□ -0.63
GDF15-205ENST00000604609 SPTLC2O15270 562 aa11.09□□□□□ -0.63
GDF15-205ENST00000604609 LGR5O75473 907 aa11.09□□□□□ -0.63
GDF15-205ENST00000604609 BAG4O95429 457 aaKnown RBP11.09□□□□□ -0.63
GDF15-205ENST00000604609 F2P00734 622 aa11.09□□□□□ -0.63
GDF15-205ENST00000604609 PSEN2P49810 448 aa11.09□□□□□ -0.63
GDF15-205ENST00000604609 FXR2P51116 673 aaKnown RBP eCLIP11.09□□□□□ -0.63
GDF15-205ENST00000604609 ORC2Q13416 577 aaPredicted RBP11.09□□□□□ -0.63
GDF15-205ENST00000604609 MFSD10Q14728 455 aa11.09□□□□□ -0.63
GDF15-205ENST00000604609 PLCB4Q15147 1175 aa11.09□□□□□ -0.63
GDF15-205ENST00000604609 ZRSR1Q15695 479 aaKnown RBP11.09□□□□□ -0.63
GDF15-205ENST00000604609 DGKDQ16760 1214 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms