RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 DTNBO60941 627 aa21.07■□□□□ 0.96
SHKBP1-202ENST00000593764 ZNF76P36508 570 aa21.07■□□□□ 0.96
SHKBP1-202ENST00000593764 NLRP5P59047 1200 aa21.07■□□□□ 0.96
SHKBP1-202ENST00000593764 NPY5RQ15761 445 aa21.07■□□□□ 0.96
SHKBP1-202ENST00000593764 OTOP2Q7RTS6 562 aa21.07■□□□□ 0.96
SHKBP1-202ENST00000593764 DEFB128Q7Z7B8 93 aa21.07■□□□□ 0.96
SHKBP1-202ENST00000593764 AFAP1L1Q8TED9 768 aa21.07■□□□□ 0.96
SHKBP1-202ENST00000593764 JPH1Q9HDC5 661 aaPredicted RBP21.07■□□□□ 0.96
SHKBP1-202ENST00000593764 SLC9A2Q9UBY0 812 aa21.07■□□□□ 0.96
SHKBP1-202ENST00000593764 TET1Q8NFU7 2136 aa21.07■□□□□ 0.96
SHKBP1-202ENST00000593764 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.06■□□□□ 0.96
SHKBP1-202ENST00000593764 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.06■□□□□ 0.96
SHKBP1-202ENST00000593764 C17orf102A2RUQ5 167 aa21.06■□□□□ 0.96
SHKBP1-202ENST00000593764 CTDNEP1O95476 244 aa21.06■□□□□ 0.96
SHKBP1-202ENST00000593764 CKBP12277 381 aa21.06■□□□□ 0.96
SHKBP1-202ENST00000593764 RFC2P35250 354 aa21.06■□□□□ 0.96
SHKBP1-202ENST00000593764 NEK4P51957 841 aa21.06■□□□□ 0.96
SHKBP1-202ENST00000593764 ADAM17P78536 824 aa21.06■□□□□ 0.96
SHKBP1-202ENST00000593764 ME3Q16798 604 aa21.06■□□□□ 0.96
SHKBP1-202ENST00000593764 TRAF7Q6Q0C0 670 aa21.06■□□□□ 0.96
SHKBP1-202ENST00000593764 SERINC5Q86VE9 423 aa21.06■□□□□ 0.96
SHKBP1-202ENST00000593764 PLA2G4DQ86XP0 818 aa21.06■□□□□ 0.96
SHKBP1-202ENST00000593764 CCDC155Q8N6L0 562 aa21.06■□□□□ 0.96
SHKBP1-202ENST00000593764 PCYT2Q99447 389 aa21.06■□□□□ 0.96
SHKBP1-202ENST00000593764 MTMR10Q9NXD2 777 aa21.06■□□□□ 0.96
SHKBP1-202ENST00000593764 ZNF215Q9UL58 517 aaPredicted RBP21.06■□□□□ 0.96
SHKBP1-202ENST00000593764 CDH23Q9H251 3354 aa21.06■□□□□ 0.96
SHKBP1-202ENST00000593764 M0R2N6 131 aa21.05■□□□□ 0.96
SHKBP1-202ENST00000593764 DHX15O43143 795 aaKnown RBP21.05■□□□□ 0.96
SHKBP1-202ENST00000593764 TREHO43280 583 aa21.05■□□□□ 0.96
SHKBP1-202ENST00000593764 LGR5O75473 907 aa21.05■□□□□ 0.96
SHKBP1-202ENST00000593764 LARGE1O95461 756 aa21.05■□□□□ 0.96
SHKBP1-202ENST00000593764 PFKMP08237 780 aa21.05■□□□□ 0.96
SHKBP1-202ENST00000593764 SELPP16109 830 aa21.05■□□□□ 0.96
SHKBP1-202ENST00000593764 CIITAP33076 1130 aa21.05■□□□□ 0.96
SHKBP1-202ENST00000593764 ATP6V0A1Q93050 837 aa21.05■□□□□ 0.96
SHKBP1-202ENST00000593764 SDF4Q9BRK5 362 aa21.05■□□□□ 0.96
SHKBP1-202ENST00000593764 SETD4Q9NVD3 440 aa21.05■□□□□ 0.96
SHKBP1-202ENST00000593764 PCDHA4Q9UN74 947 aa21.05■□□□□ 0.96
SHKBP1-202ENST00000593764 GRXCR1A8MXD5 290 aa21.04■□□□□ 0.96
SHKBP1-202ENST00000593764 CDKL5O76039 1030 aa21.04■□□□□ 0.96
SHKBP1-202ENST00000593764 ACTR2P61160 394 aa21.04■□□□□ 0.96
SHKBP1-202ENST00000593764 LRRC8DQ7L1W4 858 aa21.04■□□□□ 0.96
SHKBP1-202ENST00000593764 FAM177A1Q8N128 213 aaPredicted RBP21.04■□□□□ 0.96
SHKBP1-202ENST00000593764 NECAB1Q8N987 351 aa21.04■□□□□ 0.96
SHKBP1-202ENST00000593764 RBAK-RBAKDNI3L0D1 243 aa21.03■□□□□ 0.96
SHKBP1-202ENST00000593764 ATG7O95352 703 aa21.03■□□□□ 0.96
SHKBP1-202ENST00000593764 CCNE2O96020 404 aa21.03■□□□□ 0.96
SHKBP1-202ENST00000593764 ZNF618Q5T7W0 954 aa21.03■□□□□ 0.96
SHKBP1-202ENST00000593764 BLIDQ8IZY5 108 aa21.03■□□□□ 0.96
SHKBP1-202ENST00000593764 DAGLBQ8NCG7 672 aa21.03■□□□□ 0.96
SHKBP1-202ENST00000593764 LENG9Q96B70 501 aa21.03■□□□□ 0.96
SHKBP1-202ENST00000593764 UIMC1Q96RL1 719 aa21.03■□□□□ 0.96
SHKBP1-202ENST00000593764 KIF2CQ99661 725 aa21.03■□□□□ 0.96
SHKBP1-202ENST00000593764 SMARCAD1Q9H4L7 1026 aa21.03■□□□□ 0.96
SHKBP1-202ENST00000593764 ERAP1Q9NZ08 941 aa21.03■□□□□ 0.96
SHKBP1-202ENST00000593764 TANC1Q9C0D5 1861 aa21.03■□□□□ 0.96
SHKBP1-202ENST00000593764 EMSYQ7Z589 1322 aa21.03■□□□□ 0.96
SHKBP1-202ENST00000593764 STK36Q9NRP7 1315 aa21.03■□□□□ 0.96
SHKBP1-202ENST00000593764 IPO5O00410 1097 aaKnown RBP21.02■□□□□ 0.96
SHKBP1-202ENST00000593764 NBNO60934 754 aa21.02■□□□□ 0.96
SHKBP1-202ENST00000593764 MARK3P27448 753 aa21.02■□□□□ 0.96
SHKBP1-202ENST00000593764 USP11P51784 963 aa21.02■□□□□ 0.96
SHKBP1-202ENST00000593764 LMBR1Q8WVP7 490 aa21.02■□□□□ 0.96
SHKBP1-202ENST00000593764 GLG1Q92896 1179 aa21.02■□□□□ 0.96
SHKBP1-202ENST00000593764 GTF3C6Q969F1 213 aa21.02■□□□□ 0.96
SHKBP1-202ENST00000593764 MTIF3Q9H2K0 278 aaKnown RBP21.02■□□□□ 0.96
SHKBP1-202ENST00000593764 TTYH1Q9H313 450 aaPredicted RBP21.02■□□□□ 0.96
SHKBP1-202ENST00000593764 SEMA6BQ9H3T3 888 aa21.02■□□□□ 0.96
SHKBP1-202ENST00000593764 KCNJ14Q9UNX9 436 aa21.02■□□□□ 0.96
SHKBP1-202ENST00000593764 NRCAMQ92823 1304 aa21.02■□□□□ 0.95
SHKBP1-202ENST00000593764 CXCL10P02778 98 aa21.01■□□□□ 0.95
SHKBP1-202ENST00000593764 GNAT1P11488 350 aa21.01■□□□□ 0.95
SHKBP1-202ENST00000593764 FDPSP14324 419 aaKnown RBP21.01■□□□□ 0.95
SHKBP1-202ENST00000593764 PBX2P40425 430 aa21.01■□□□□ 0.95
SHKBP1-202ENST00000593764 SETQ01105 290 aaPredicted RBP21.01■□□□□ 0.95
SHKBP1-202ENST00000593764 MBTPS1Q14703 1052 aa21.01■□□□□ 0.95
SHKBP1-202ENST00000593764 PRR16Q569H4 304 aa21.01■□□□□ 0.95
SHKBP1-202ENST00000593764 GALNT17Q6IS24 598 aa21.01■□□□□ 0.95
SHKBP1-202ENST00000593764 ABHD15Q6UXT9 468 aa21.01■□□□□ 0.95
SHKBP1-202ENST00000593764 TBCKQ8TEA7 893 aa21.01■□□□□ 0.95
SHKBP1-202ENST00000593764 FAM161BQ96MY7 647 aa21.01■□□□□ 0.95
SHKBP1-202ENST00000593764 PHF20Q9BVI0 1012 aa21.01■□□□□ 0.95
SHKBP1-202ENST00000593764 PBX4Q9BYU1 374 aa21.01■□□□□ 0.95
SHKBP1-202ENST00000593764 FTOQ9C0B1 505 aaKnown RBP eCLIP21.01■□□□□ 0.95
SHKBP1-202ENST00000593764 GJB4Q9NTQ9 266 aa21.01■□□□□ 0.95
SHKBP1-202ENST00000593764 CHD9Q3L8U1 2897 aa21.01■□□□□ 0.95
SHKBP1-202ENST00000593764 IGKV6D-21A0A0A0MT36 114 aa21■□□□□ 0.95
SHKBP1-202ENST00000593764 DDX39AO00148 427 aaKnown RBP21■□□□□ 0.95
SHKBP1-202ENST00000593764 PARNO95453 639 aaKnown RBP21■□□□□ 0.95
SHKBP1-202ENST00000593764 DNAJB2P25686 324 aa21■□□□□ 0.95
SHKBP1-202ENST00000593764 THPOP40225 353 aa21■□□□□ 0.95
SHKBP1-202ENST00000593764 ZNF697Q5TEC3 545 aa21■□□□□ 0.95
SHKBP1-202ENST00000593764 PLPPR4Q7Z2D5 763 aa21■□□□□ 0.95
SHKBP1-202ENST00000593764 GUCD1Q96NT3 240 aa21■□□□□ 0.95
SHKBP1-202ENST00000593764 ZNF577Q9BSK1 485 aa21■□□□□ 0.95
SHKBP1-202ENST00000593764 ORC3Q9UBD5 711 aaPredicted RBP21■□□□□ 0.95
SHKBP1-202ENST00000593764 SLC4A7Q9Y6M7 1214 aa21■□□□□ 0.95
SHKBP1-202ENST00000593764 KAT6AQ92794 2004 aa21■□□□□ 0.95
SHKBP1-202ENST00000593764 ST3GAL1Q11201 340 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms