RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 GLT1D1Q96MS3 346 aa21.62■■□□□ 1.05
DDX39A-214ENST00000590556 TMEM60Q9H2L4 133 aa21.62■■□□□ 1.05
DDX39A-214ENST00000590556 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.62■■□□□ 1.05
DDX39A-214ENST00000590556 BRCA2P51587 3418 aa21.61■■□□□ 1.05
DDX39A-214ENST00000590556 ELP1O95163 1332 aa21.61■■□□□ 1.05
DDX39A-214ENST00000590556 TCF7P36402 384 aaPredicted RBP21.61■■□□□ 1.05
DDX39A-214ENST00000590556 UTP14CQ5TAP6 766 aaKnown RBP21.61■■□□□ 1.05
DDX39A-214ENST00000590556 MTMR9Q96QG7 549 aa21.61■■□□□ 1.05
DDX39A-214ENST00000590556 CHMP2AO43633 222 aa21.6■■□□□ 1.05
DDX39A-214ENST00000590556 F13A1P00488 732 aa21.6■■□□□ 1.05
DDX39A-214ENST00000590556 OR52Z1P0C646 297 aa21.6■■□□□ 1.05
DDX39A-214ENST00000590556 ZNF286BP0CG31 522 aa21.6■■□□□ 1.05
DDX39A-214ENST00000590556 TXKP42681 527 aa21.6■■□□□ 1.05
DDX39A-214ENST00000590556 PTGDRQ13258 359 aa21.6■■□□□ 1.05
DDX39A-214ENST00000590556 FAM173BQ6P4H8 233 aa21.6■■□□□ 1.05
DDX39A-214ENST00000590556 SMAP1Q8IYB5 467 aaPredicted RBP21.6■■□□□ 1.05
DDX39A-214ENST00000590556 C4orf32Q8N8J7 132 aa21.6■■□□□ 1.05
DDX39A-214ENST00000590556 UNC45AQ9H3U1 944 aa21.6■■□□□ 1.05
DDX39A-214ENST00000590556 STARD7Q9NQZ5 370 aa21.6■■□□□ 1.05
DDX39A-214ENST00000590556 WDR64B1ANS9 1081 aa21.59■■□□□ 1.05
DDX39A-214ENST00000590556 ATG7O95352 703 aa21.59■■□□□ 1.05
DDX39A-214ENST00000590556 LGALS2P05162 132 aa21.59■■□□□ 1.05
DDX39A-214ENST00000590556 JAK3P52333 1124 aa21.59■■□□□ 1.05
DDX39A-214ENST00000590556 MIS18BP1Q6P0N0 1132 aa21.59■■□□□ 1.05
DDX39A-214ENST00000590556 ABHD15Q6UXT9 468 aa21.59■■□□□ 1.05
DDX39A-214ENST00000590556 VAV3Q9UKW4 847 aa21.59■■□□□ 1.05
DDX39A-214ENST00000590556 PCDHA12Q9UN75 941 aa21.59■■□□□ 1.05
DDX39A-214ENST00000590556 SAMM50Q9Y512 469 aa21.59■■□□□ 1.05
DDX39A-214ENST00000590556 LAD1O00515 517 aa21.58■■□□□ 1.05
DDX39A-214ENST00000590556 BRD1O95696 1058 aa21.58■■□□□ 1.05
DDX39A-214ENST00000590556 PSAPP07602 524 aa21.58■■□□□ 1.05
DDX39A-214ENST00000590556 SUPT20HL2P0C7V6 817 aa21.58■■□□□ 1.05
DDX39A-214ENST00000590556 SFNP31947 248 aa21.58■■□□□ 1.05
DDX39A-214ENST00000590556 CHMP4BP1P59074 171 aa21.58■■□□□ 1.05
DDX39A-214ENST00000590556 PSMC6P62333 389 aa21.58■■□□□ 1.05
DDX39A-214ENST00000590556 PPP2R5CQ13362 524 aa21.58■■□□□ 1.05
DDX39A-214ENST00000590556 B3GNT9Q6UX72 402 aa21.58■■□□□ 1.05
DDX39A-214ENST00000590556 MIER3Q7Z3K6 550 aa21.58■■□□□ 1.05
DDX39A-214ENST00000590556 KAT2BQ92831 832 aa21.58■■□□□ 1.05
DDX39A-214ENST00000590556 GLG1Q92896 1179 aa21.58■■□□□ 1.05
DDX39A-214ENST00000590556 C16orf70Q9BSU1 422 aa21.58■■□□□ 1.05
DDX39A-214ENST00000590556 AZI2Q9H6S1 392 aa21.58■■□□□ 1.05
DDX39A-214ENST00000590556 TTC12Q9H892 705 aaPredicted RBP21.58■■□□□ 1.05
DDX39A-214ENST00000590556 DISC1Q9NRI5 854 aa21.58■■□□□ 1.05
DDX39A-214ENST00000590556 PCDHA10Q9Y5I2 948 aa21.58■■□□□ 1.05
DDX39A-214ENST00000590556 H3BRB1 525 aa21.57■■□□□ 1.04
DDX39A-214ENST00000590556 BACH1O14867 736 aa21.57■■□□□ 1.04
DDX39A-214ENST00000590556 LGR5O75473 907 aa21.57■■□□□ 1.04
DDX39A-214ENST00000590556 F2P00734 622 aa21.57■■□□□ 1.04
DDX39A-214ENST00000590556 PSEN2P49810 448 aa21.57■■□□□ 1.04
DDX39A-214ENST00000590556 ATN1P54259 1190 aaPredicted RBP21.57■■□□□ 1.04
DDX39A-214ENST00000590556 SLC39A5Q6ZMH5 540 aa21.57■■□□□ 1.04
DDX39A-214ENST00000590556 TRIM50Q86XT4 487 aa21.57■■□□□ 1.04
DDX39A-214ENST00000590556 RDM1Q8NG50 284 aa21.57■■□□□ 1.04
DDX39A-214ENST00000590556 ZNF396Q96N95 335 aaPredicted RBP21.57■■□□□ 1.04
DDX39A-214ENST00000590556 KATNAL1Q9BW62 490 aa21.57■■□□□ 1.04
DDX39A-214ENST00000590556 SMARCAD1Q9H4L7 1026 aa21.57■■□□□ 1.04
DDX39A-214ENST00000590556 TUT1Q9H6E5 874 aaKnown RBP21.57■■□□□ 1.04
DDX39A-214ENST00000590556 ZNF215Q9UL58 517 aaPredicted RBP21.57■■□□□ 1.04
DDX39A-214ENST00000590556 CEP131Q9UPN4 1083 aa21.57■■□□□ 1.04
DDX39A-214ENST00000590556 ZDHHC9Q9Y397 364 aa21.57■■□□□ 1.04
DDX39A-214ENST00000590556 EMSYQ7Z589 1322 aa21.56■■□□□ 1.04
DDX39A-214ENST00000590556 SCN10AQ9Y5Y9 1956 aa21.56■■□□□ 1.04
DDX39A-214ENST00000590556 A0A0U1RQG5 324 aaPredicted RBP21.56■■□□□ 1.04
DDX39A-214ENST00000590556 BMP15O95972 392 aa21.56■■□□□ 1.04
DDX39A-214ENST00000590556 DDIT3P35638 169 aa21.56■■□□□ 1.04
DDX39A-214ENST00000590556 ATP2C1P98194 919 aaPredicted RBP21.56■■□□□ 1.04
DDX39A-214ENST00000590556 ITGA7Q13683 1181 aa21.56■■□□□ 1.04
DDX39A-214ENST00000590556 MFSD10Q14728 455 aa21.56■■□□□ 1.04
DDX39A-214ENST00000590556 SF3A1Q15459 793 aaKnown RBP21.56■■□□□ 1.04
DDX39A-214ENST00000590556 FAM160B1Q5W0V3 765 aa21.56■■□□□ 1.04
DDX39A-214ENST00000590556 NCAPH2Q6IBW4 605 aa21.56■■□□□ 1.04
DDX39A-214ENST00000590556 SWSAP1Q6NVH7 229 aa21.56■■□□□ 1.04
DDX39A-214ENST00000590556 PCYT2Q99447 389 aa21.56■■□□□ 1.04
DDX39A-214ENST00000590556 ZNF302Q9NR11 478 aa21.56■■□□□ 1.04
DDX39A-214ENST00000590556 IGKV6D-21A0A0A0MT36 114 aa21.55■■□□□ 1.04
DDX39A-214ENST00000590556 EML1O00423 815 aa21.55■■□□□ 1.04
DDX39A-214ENST00000590556 TECP42680 631 aa21.55■■□□□ 1.04
DDX39A-214ENST00000590556 STAT5BP51692 787 aa21.55■■□□□ 1.04
DDX39A-214ENST00000590556 NUCB2P80303 420 aa21.55■■□□□ 1.04
DDX39A-214ENST00000590556 CEBPZQ03701 1054 aaKnown RBP21.55■■□□□ 1.04
DDX39A-214ENST00000590556 SPIRE1Q08AE8 756 aa21.55■■□□□ 1.04
DDX39A-214ENST00000590556 KIAA0753Q2KHM9 967 aa21.55■■□□□ 1.04
DDX39A-214ENST00000590556 TMEM266Q2M3C6 531 aa21.55■■□□□ 1.04
DDX39A-214ENST00000590556 NBPF20Q3BBV1 942 aa21.55■■□□□ 1.04
DDX39A-214ENST00000590556 FOXD4L6Q3SYB3 417 aaPredicted RBP21.55■■□□□ 1.04
DDX39A-214ENST00000590556 FOXD4L3Q6VB84 417 aaPredicted RBP21.55■■□□□ 1.04
DDX39A-214ENST00000590556 PLPPR4Q7Z2D5 763 aa21.55■■□□□ 1.04
DDX39A-214ENST00000590556 CCDC60Q8IWA6 550 aaPredicted RBP21.55■■□□□ 1.04
DDX39A-214ENST00000590556 FTOQ9C0B1 505 aaKnown RBP eCLIP21.55■■□□□ 1.04
DDX39A-214ENST00000590556 ERAP1Q9NZ08 941 aa21.55■■□□□ 1.04
DDX39A-214ENST00000590556 CLIC4Q9Y696 253 aa21.55■■□□□ 1.04
DDX39A-214ENST00000590556 MYH15Q9Y2K3 1946 aa21.55■■□□□ 1.04
DDX39A-214ENST00000590556 GRIN2DO15399 1336 aa21.55■■□□□ 1.04
DDX39A-214ENST00000590556 ARVCFO00192 962 aa21.54■■□□□ 1.04
DDX39A-214ENST00000590556 HAS3O00219 553 aa21.54■■□□□ 1.04
DDX39A-214ENST00000590556 PRPHP41219 470 aa21.54■■□□□ 1.04
DDX39A-214ENST00000590556 DTHD1Q6ZMT9 781 aa21.54■■□□□ 1.04
DDX39A-214ENST00000590556 USP28Q96RU2 1077 aa21.54■■□□□ 1.04
DDX39A-214ENST00000590556 SEZ6LQ9BYH1 1024 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms