RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 DDX11L8A8MPP1 907 aa19.07■□□□□ 0.64
SCAMP4-211ENST00000588907 PSAPP07602 524 aa19.07■□□□□ 0.64
SCAMP4-211ENST00000588907 UBA7P41226 1012 aa19.07■□□□□ 0.64
SCAMP4-211ENST00000588907 ACTR2P61160 394 aa19.07■□□□□ 0.64
SCAMP4-211ENST00000588907 TRIM32Q13049 653 aa19.07■□□□□ 0.64
SCAMP4-211ENST00000588907 EPHA7Q15375 998 aa19.07■□□□□ 0.64
SCAMP4-211ENST00000588907 NCAPH2Q6IBW4 605 aa19.07■□□□□ 0.64
SCAMP4-211ENST00000588907 SEPT1Q8WYJ6 367 aa19.07■□□□□ 0.64
SCAMP4-211ENST00000588907 ARMC5Q96C12 935 aa19.07■□□□□ 0.64
SCAMP4-211ENST00000588907 CSRNP2Q9H175 543 aa19.07■□□□□ 0.64
SCAMP4-211ENST00000588907 UNC45AQ9H3U1 944 aa19.07■□□□□ 0.64
SCAMP4-211ENST00000588907 GDPD2Q9HCC8 539 aa19.07■□□□□ 0.64
SCAMP4-211ENST00000588907 DISC1Q9NRI5 854 aa19.07■□□□□ 0.64
SCAMP4-211ENST00000588907 FAM13BQ9NYF5 915 aa19.07■□□□□ 0.64
SCAMP4-211ENST00000588907 SAMM50Q9Y512 469 aa19.07■□□□□ 0.64
SCAMP4-211ENST00000588907 POTEMA6NI47 508 aa19.06■□□□□ 0.64
SCAMP4-211ENST00000588907 DDX39AO00148 427 aaKnown RBP19.06■□□□□ 0.64
SCAMP4-211ENST00000588907 CAPN2P17655 700 aa19.06■□□□□ 0.64
SCAMP4-211ENST00000588907 CMA1P23946 247 aa19.06■□□□□ 0.64
SCAMP4-211ENST00000588907 CCND3P30281 292 aaPredicted RBP19.06■□□□□ 0.64
SCAMP4-211ENST00000588907 UBE2HP62256 183 aa19.06■□□□□ 0.64
SCAMP4-211ENST00000588907 NKX3-2P78367 333 aa19.06■□□□□ 0.64
SCAMP4-211ENST00000588907 IL17AQ16552 155 aa19.06■□□□□ 0.64
SCAMP4-211ENST00000588907 AXDND1Q5T1B0 1012 aaPredicted RBP19.06■□□□□ 0.64
SCAMP4-211ENST00000588907 SH3TC2Q8TF17 1288 aa19.06■□□□□ 0.64
SCAMP4-211ENST00000588907 GJA10Q969M2 543 aa19.06■□□□□ 0.64
SCAMP4-211ENST00000588907 CHAMP1Q96JM3 812 aa19.06■□□□□ 0.64
SCAMP4-211ENST00000588907 CCSER1Q9C0I3 900 aa19.06■□□□□ 0.64
SCAMP4-211ENST00000588907 NT5C3AQ9H0P0 336 aa19.06■□□□□ 0.64
SCAMP4-211ENST00000588907 CHMP2AO43633 222 aa19.05■□□□□ 0.64
SCAMP4-211ENST00000588907 ZEB2O60315 1214 aa19.05■□□□□ 0.64
SCAMP4-211ENST00000588907 KPNA6O60684 536 aa19.05■□□□□ 0.64
SCAMP4-211ENST00000588907 PPFIA4O75335 1185 aa19.05■□□□□ 0.64
SCAMP4-211ENST00000588907 ATG7O95352 703 aa19.05■□□□□ 0.64
SCAMP4-211ENST00000588907 CCNE2O96020 404 aa19.05■□□□□ 0.64
SCAMP4-211ENST00000588907 SUPT20HL2P0C7V6 817 aa19.05■□□□□ 0.64
SCAMP4-211ENST00000588907 SLC26A2P50443 739 aa19.05■□□□□ 0.64
SCAMP4-211ENST00000588907 GJA9P57773 515 aa19.05■□□□□ 0.64
SCAMP4-211ENST00000588907 DGKDQ16760 1214 aa19.05■□□□□ 0.64
SCAMP4-211ENST00000588907 FAM160B1Q5W0V3 765 aa19.05■□□□□ 0.64
SCAMP4-211ENST00000588907 ATP6V0A1Q93050 837 aa19.05■□□□□ 0.64
SCAMP4-211ENST00000588907 CALML4Q96GE6 196 aa19.05■□□□□ 0.64
SCAMP4-211ENST00000588907 CLIC6Q96NY7 704 aa19.05■□□□□ 0.64
SCAMP4-211ENST00000588907 GPR20Q99678 358 aa19.05■□□□□ 0.64
SCAMP4-211ENST00000588907 POLR3CQ9BUI4 534 aaPredicted RBP19.05■□□□□ 0.64
SCAMP4-211ENST00000588907 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.05■□□□□ 0.645e-6■■■□□ 16.8
SCAMP4-211ENST00000588907 UPF3AQ9H1J1 476 aaKnown RBP19.05■□□□□ 0.64
SCAMP4-211ENST00000588907 AZI2Q9H6S1 392 aa19.05■□□□□ 0.64
SCAMP4-211ENST00000588907 TUFT1Q9NNX1 390 aa19.05■□□□□ 0.64
SCAMP4-211ENST00000588907 CCDC39Q9UFE4 941 aa19.05■□□□□ 0.64
SCAMP4-211ENST00000588907 A6NJR5 290 aa19.04■□□□□ 0.64
SCAMP4-211ENST00000588907 DYNC1LI2O43237 492 aaPredicted RBP19.04■□□□□ 0.64
SCAMP4-211ENST00000588907 P4HBP07237 508 aaKnown RBP19.04■□□□□ 0.64
SCAMP4-211ENST00000588907 HOXD8P13378 290 aaPredicted RBP19.04■□□□□ 0.64
SCAMP4-211ENST00000588907 RPA1P27694 616 aa19.04■□□□□ 0.64
SCAMP4-211ENST00000588907 RESP18Q5W5W9 173 aa19.04■□□□□ 0.64
SCAMP4-211ENST00000588907 ABHD15Q6UXT9 468 aa19.04■□□□□ 0.64
SCAMP4-211ENST00000588907 RASSF8Q8NHQ8 419 aa19.04■□□□□ 0.64
SCAMP4-211ENST00000588907 SNX29Q8TEQ0 813 aa19.04■□□□□ 0.64
SCAMP4-211ENST00000588907 MRPS27Q92552 414 aaKnown RBP19.04■□□□□ 0.64
SCAMP4-211ENST00000588907 COPS5Q92905 334 aa19.04■□□□□ 0.64
SCAMP4-211ENST00000588907 CDK5RAP3Q96JB5 506 aa19.04■□□□□ 0.64
SCAMP4-211ENST00000588907 ZNF333Q96JL9 665 aa19.04■□□□□ 0.64
SCAMP4-211ENST00000588907 UIMC1Q96RL1 719 aa19.04■□□□□ 0.64
SCAMP4-211ENST00000588907 XPNPEP3Q9NQH7 507 aa19.04■□□□□ 0.64
SCAMP4-211ENST00000588907 PAK6Q9NQU5 681 aaPredicted RBP19.04■□□□□ 0.64
SCAMP4-211ENST00000588907 CENPFP49454 3210 aa19.04■□□□□ 0.64
SCAMP4-211ENST00000588907 EMSYQ7Z589 1322 aa19.03■□□□□ 0.64
SCAMP4-211ENST00000588907 DOCK5Q9H7D0 1870 aa19.03■□□□□ 0.64
SCAMP4-211ENST00000588907 ADCY6O43306 1168 aa19.03■□□□□ 0.64
SCAMP4-211ENST00000588907 MMP3P08254 477 aa19.03■□□□□ 0.64
SCAMP4-211ENST00000588907 CST5P28325 142 aaPredicted RBP19.03■□□□□ 0.64
SCAMP4-211ENST00000588907 TCF7P36402 384 aaPredicted RBP19.03■□□□□ 0.64
SCAMP4-211ENST00000588907 SP4Q02446 784 aa19.03■□□□□ 0.64
SCAMP4-211ENST00000588907 FSCN1Q16658 493 aaKnown RBP19.03■□□□□ 0.64
SCAMP4-211ENST00000588907 HSDL1Q3SXM5 330 aa19.03■□□□□ 0.64
SCAMP4-211ENST00000588907 RNF180Q86T96 592 aa19.03■□□□□ 0.64
SCAMP4-211ENST00000588907 CABP7Q86V35 215 aa19.03■□□□□ 0.64
SCAMP4-211ENST00000588907 AFAP1L1Q8TED9 768 aa19.03■□□□□ 0.64
SCAMP4-211ENST00000588907 AFG1LQ8WV93 481 aa19.03■□□□□ 0.64
SCAMP4-211ENST00000588907 SYMPKQ92797 1274 aaKnown RBP19.03■□□□□ 0.64
SCAMP4-211ENST00000588907 EIF2AK1Q9BQI3 630 aaKnown RBP19.03■□□□□ 0.64
SCAMP4-211ENST00000588907 ZSWIM4Q9H7M6 989 aa19.03■□□□□ 0.64
SCAMP4-211ENST00000588907 ZNF215Q9UL58 517 aaPredicted RBP19.03■□□□□ 0.64
SCAMP4-211ENST00000588907 SYNRGQ9UMZ2 1314 aa19.02■□□□□ 0.64
SCAMP4-211ENST00000588907 IGKV6D-21A0A0A0MT36 114 aa19.02■□□□□ 0.64
SCAMP4-211ENST00000588907 FAM237AA0A1B0GTK4 181 aa19.02■□□□□ 0.64
SCAMP4-211ENST00000588907 EML1O00423 815 aa19.02■□□□□ 0.64
SCAMP4-211ENST00000588907 BACH1O14867 736 aa19.02■□□□□ 0.64
SCAMP4-211ENST00000588907 PRPF40AO75400 957 aaKnown RBP19.02■□□□□ 0.64
SCAMP4-211ENST00000588907 MCM4P33991 863 aa19.02■□□□□ 0.64
SCAMP4-211ENST00000588907 CCT6AP40227 531 aaKnown RBP19.02■□□□□ 0.64
SCAMP4-211ENST00000588907 QARSP47897 775 aaKnown RBP19.02■□□□□ 0.64
SCAMP4-211ENST00000588907 PSMC5P62195 406 aa19.02■□□□□ 0.64
SCAMP4-211ENST00000588907 GRIN1Q05586 938 aa19.02■□□□□ 0.64
SCAMP4-211ENST00000588907 HYIQ5T013 277 aa19.02■□□□□ 0.64
SCAMP4-211ENST00000588907 GJC2Q5T442 439 aaPredicted RBP19.02■□□□□ 0.64
SCAMP4-211ENST00000588907 SHC4Q6S5L8 630 aa19.02■□□□□ 0.64
SCAMP4-211ENST00000588907 CCDC73Q6ZRK6 1079 aa19.02■□□□□ 0.64
SCAMP4-211ENST00000588907 PLPPR4Q7Z2D5 763 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms