RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 SLX1AQ9BQ83 275 aa6.93□□□□□ -1.3
SMAD4-203ENST00000585448 MTA3Q9BTC8 594 aa6.93□□□□□ -1.3
SMAD4-203ENST00000585448 SP110Q9HB58 689 aa6.93□□□□□ -1.3
SMAD4-203ENST00000585448 IFT57Q9NWB7 429 aa6.93□□□□□ -1.3
SMAD4-203ENST00000585448 ADAM21Q9UKJ8 722 aa6.93□□□□□ -1.3
SMAD4-203ENST00000585448 ODF2LQ9ULJ1 636 aa6.93□□□□□ -1.3
SMAD4-203ENST00000585448 MSRB2Q9Y3D2 182 aa6.93□□□□□ -1.3
SMAD4-203ENST00000585448 TIAM1Q13009 1591 aa6.93□□□□□ -1.3
SMAD4-203ENST00000585448 PTPRGP23470 1445 aa6.93□□□□□ -1.3
SMAD4-203ENST00000585448 CAMSAP2Q08AD1 1489 aa6.92□□□□□ -1.3
SMAD4-203ENST00000585448 RAPGEF2Q9Y4G8 1499 aa6.92□□□□□ -1.3
SMAD4-203ENST00000585448 EPRSP07814 1512 aaKnown RBP6.92□□□□□ -1.3
SMAD4-203ENST00000585448 FITM1A5D6W6 292 aa6.92□□□□□ -1.3
SMAD4-203ENST00000585448 GOLGA6L10A6NI86 522 aa6.92□□□□□ -1.3
SMAD4-203ENST00000585448 H0Y8X5 98 aa6.92□□□□□ -1.3
SMAD4-203ENST00000585448 PDLIM1O00151 329 aa6.92□□□□□ -1.3
SMAD4-203ENST00000585448 SYPP08247 313 aa6.92□□□□□ -1.3
SMAD4-203ENST00000585448 NBPF7P0C2Y1 421 aaPredicted RBP6.92□□□□□ -1.3
SMAD4-203ENST00000585448 PAX3P23760 479 aa6.92□□□□□ -1.3
SMAD4-203ENST00000585448 ALDH1B1P30837 517 aa6.92□□□□□ -1.3
SMAD4-203ENST00000585448 GCKP35557 465 aa6.92□□□□□ -1.3
SMAD4-203ENST00000585448 RAB27AP51159 221 aa6.92□□□□□ -1.3
SMAD4-203ENST00000585448 CCNHP51946 323 aaPredicted RBP6.92□□□□□ -1.3
SMAD4-203ENST00000585448 POU4F1Q01851 419 aa6.92□□□□□ -1.3
SMAD4-203ENST00000585448 SCRN1Q12765 414 aa6.92□□□□□ -1.3
SMAD4-203ENST00000585448 DHX8Q14562 1220 aaKnown RBP6.92□□□□□ -1.3
SMAD4-203ENST00000585448 CCDC158Q5M9N0 1113 aa6.92□□□□□ -1.3
SMAD4-203ENST00000585448 CCDC183Q5T5S1 534 aa6.92□□□□□ -1.3
SMAD4-203ENST00000585448 ACBD5Q5T8D3 534 aaPredicted RBP6.92□□□□□ -1.3
SMAD4-203ENST00000585448 LARP1BQ659C4 914 aaKnown RBP6.92□□□□□ -1.3
SMAD4-203ENST00000585448 CWF19L1Q69YN2 538 aaKnown RBP6.92□□□□□ -1.3
SMAD4-203ENST00000585448 CRTC3Q6UUV7 619 aa6.92□□□□□ -1.3
SMAD4-203ENST00000585448 LRRC31Q6UY01 552 aa6.92□□□□□ -1.3
SMAD4-203ENST00000585448 MFN1Q8IWA4 741 aa6.92□□□□□ -1.3
SMAD4-203ENST00000585448 OXR1Q8N573 874 aa6.92□□□□□ -1.3
SMAD4-203ENST00000585448 MAGEC3Q8TD91 643 aa6.92□□□□□ -1.3
SMAD4-203ENST00000585448 HNRNPLLQ8WVV9 542 aaKnown RBP6.92□□□□□ -1.3
SMAD4-203ENST00000585448 ZNF669Q96BR6 464 aaPredicted RBP6.92□□□□□ -1.3
SMAD4-203ENST00000585448 DTNBP1Q96EV8 351 aa6.92□□□□□ -1.3
SMAD4-203ENST00000585448 C16orf45Q96MC5 204 aaPredicted RBP6.92□□□□□ -1.3
SMAD4-203ENST00000585448 APBA2Q99767 749 aa6.92□□□□□ -1.3
SMAD4-203ENST00000585448 ARPC5LQ9BPX5 153 aa6.92□□□□□ -1.3
SMAD4-203ENST00000585448 SLC12A9Q9BXP2 914 aa6.92□□□□□ -1.3
SMAD4-203ENST00000585448 TRIM7Q9C029 511 aa6.92□□□□□ -1.3
SMAD4-203ENST00000585448 ADAMTS10Q9H324 1103 aa6.92□□□□□ -1.3
SMAD4-203ENST00000585448 L2HGDHQ9H9P8 463 aa6.92□□□□□ -1.3
SMAD4-203ENST00000585448 INCENPQ9NQS7 918 aa6.92□□□□□ -1.3
SMAD4-203ENST00000585448 PDRG1Q9NUG6 133 aa6.92□□□□□ -1.3
SMAD4-203ENST00000585448 CGGBP1Q9UFW8 167 aaPredicted RBP6.92□□□□□ -1.3
SMAD4-203ENST00000585448 MINPP1Q9UNW1 487 aa6.92□□□□□ -1.3
SMAD4-203ENST00000585448 RIPOR2Q9Y4F9 1068 aa6.92□□□□□ -1.3
SMAD4-203ENST00000585448 ATXN2Q99700 1313 aaKnown RBP6.92□□□□□ -1.3
SMAD4-203ENST00000585448 SHROOM2Q13796 1616 aa6.91□□□□□ -1.3
SMAD4-203ENST00000585448 SSU72P8A0A1W2PR75 194 aa6.91□□□□□ -1.3
SMAD4-203ENST00000585448 ZSCAN9O15535 394 aaPredicted RBP6.91□□□□□ -1.3
SMAD4-203ENST00000585448 AHCYL1O43865 530 aa6.91□□□□□ -1.3
SMAD4-203ENST00000585448 ERLIN1O75477 346 aa6.91□□□□□ -1.3
SMAD4-203ENST00000585448 RTN3O95197 1032 aaPredicted RBP6.91□□□□□ -1.3
SMAD4-203ENST00000585448 TAL1P17542 331 aaPredicted RBP6.91□□□□□ -1.3
SMAD4-203ENST00000585448 CDR1P51861 262 aa6.91□□□□□ -1.3
SMAD4-203ENST00000585448 PSMC1P62191 440 aaKnown RBP6.91□□□□□ -1.3
SMAD4-203ENST00000585448 DEUP1Q05D60 604 aa6.91□□□□□ -1.3
SMAD4-203ENST00000585448 NEXNQ0ZGT2 675 aa6.91□□□□□ -1.3
SMAD4-203ENST00000585448 RTP2Q5QGT7 225 aa6.91□□□□□ -1.3
SMAD4-203ENST00000585448 SOGA3Q5TF21 947 aa6.91□□□□□ -1.3
SMAD4-203ENST00000585448 POMZP3Q6PJE2 187 aa6.91□□□□□ -1.3
SMAD4-203ENST00000585448 EEPD1Q7L9B9 569 aa6.91□□□□□ -1.3
SMAD4-203ENST00000585448 BRAPQ7Z569 592 aa6.91□□□□□ -1.3
SMAD4-203ENST00000585448 SPATA21Q7Z572 469 aa6.91□□□□□ -1.3
SMAD4-203ENST00000585448 TAX1BP1Q86VP1 789 aa6.91□□□□□ -1.3
SMAD4-203ENST00000585448 IQCA1Q86XH1 822 aa6.91□□□□□ -1.3
SMAD4-203ENST00000585448 SPATS2Q86XZ4 545 aaKnown RBP6.91□□□□□ -1.3
SMAD4-203ENST00000585448 MYLK4Q86YV6 388 aaPredicted RBP6.91□□□□□ -1.3
SMAD4-203ENST00000585448 SPPL2CQ8IUH8 684 aa6.91□□□□□ -1.3
SMAD4-203ENST00000585448 NME8Q8N427 588 aa6.91□□□□□ -1.3
SMAD4-203ENST00000585448 SAMD3Q8N6K7 520 aa6.91□□□□□ -1.3
SMAD4-203ENST00000585448 PRPF38AQ8NAV1 312 aaKnown RBP6.91□□□□□ -1.3
SMAD4-203ENST00000585448 CFAP53Q96M91 514 aa6.91□□□□□ -1.3
SMAD4-203ENST00000585448 POLR3CQ9BUI4 534 aaPredicted RBP6.91□□□□□ -1.3
SMAD4-203ENST00000585448 NOL6Q9H6R4 1146 aaKnown RBP6.91□□□□□ -1.3
SMAD4-203ENST00000585448 TNFRSF10DQ9UBN6 386 aa6.91□□□□□ -1.3
SMAD4-203ENST00000585448 EMC9Q9Y3B6 208 aa6.91□□□□□ -1.3
SMAD4-203ENST00000585448 PARD3Q8TEW0 1356 aa6.91□□□□□ -1.3
SMAD4-203ENST00000585448 NAIPQ13075 1403 aa6.91□□□□□ -1.3
SMAD4-203ENST00000585448 FYCO1Q9BQS8 1478 aa6.91□□□□□ -1.3
SMAD4-203ENST00000585448 GOLGA6L19H0YKK7 550 aa6.9□□□□□ -1.3
SMAD4-203ENST00000585448 IPO5O00410 1097 aaKnown RBP6.9□□□□□ -1.3
SMAD4-203ENST00000585448 SUSD5O60279 629 aa6.9□□□□□ -1.3
SMAD4-203ENST00000585448 SASH1O94885 1247 aa6.9□□□□□ -1.3
SMAD4-203ENST00000585448 GJB6O95452 261 aa6.9□□□□□ -1.3
SMAD4-203ENST00000585448 RAC2P15153 192 aa6.9□□□□□ -1.3
SMAD4-203ENST00000585448 CASTP20810 708 aaKnown RBP6.9□□□□□ -1.3
SMAD4-203ENST00000585448 CLNS1AP54105 237 aaKnown RBP6.9□□□□□ -1.3
SMAD4-203ENST00000585448 G3BP1Q13283 466 aaKnown RBP eCLIP6.9□□□□□ -1.3
SMAD4-203ENST00000585448 SLMAPQ14BN4 828 aa6.9□□□□□ -1.3
SMAD4-203ENST00000585448 SNX17Q15036 470 aa6.9□□□□□ -1.3
SMAD4-203ENST00000585448 IQCB1Q15051 598 aa6.9□□□□□ -1.3
SMAD4-203ENST00000585448 MRM1Q6IN84 353 aaKnown RBP6.9□□□□□ -1.3
SMAD4-203ENST00000585448 APLFQ8IW19 511 aaPredicted RBP6.9□□□□□ -1.3
SMAD4-203ENST00000585448 AMOTL1Q8IY63 956 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms