RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 LRRCC1Q9C099 1032 aa6.88□□□□□ -1.31
SMG6-219ENST00000575663 PXMP2Q9NR77 195 aa6.88□□□□□ -1.31
SMG6-219ENST00000575663 AAASQ9NRG9 546 aa6.88□□□□□ -1.31
SMG6-219ENST00000575663 ECHDC1Q9NTX5 307 aa6.88□□□□□ -1.31
SMG6-219ENST00000575663 MRPL11Q9Y3B7 192 aaKnown RBP6.88□□□□□ -1.31
SMG6-219ENST00000575663 ORC4O43929 436 aa6.87□□□□□ -1.31
SMG6-219ENST00000575663 SORBS3O60504 671 aa6.87□□□□□ -1.31
SMG6-219ENST00000575663 BRD1O95696 1058 aa6.87□□□□□ -1.31
SMG6-219ENST00000575663 RPLP2P05387 115 aaKnown RBP6.87□□□□□ -1.31
SMG6-219ENST00000575663 NR3C2P08235 984 aa6.87□□□□□ -1.31
SMG6-219ENST00000575663 TGFB3P10600 412 aa6.87□□□□□ -1.31
SMG6-219ENST00000575663 HSPD1P10809 573 aaKnown RBP6.87□□□□□ -1.31
SMG6-219ENST00000575663 HOXB8P17481 243 aaPredicted RBP6.87□□□□□ -1.31
SMG6-219ENST00000575663 UBA1P22314 1058 aaKnown RBP6.87□□□□□ -1.31
SMG6-219ENST00000575663 TECP42680 631 aa6.87□□□□□ -1.31
SMG6-219ENST00000575663 ARHGAP4P98171 946 aa6.87□□□□□ -1.31
SMG6-219ENST00000575663 CTDSPL2Q05D32 466 aa6.87□□□□□ -1.31
SMG6-219ENST00000575663 ANGPT1Q15389 498 aa6.87□□□□□ -1.31
SMG6-219ENST00000575663 CDC37Q16543 378 aaPredicted RBP6.87□□□□□ -1.31
SMG6-219ENST00000575663 DUSP6Q16828 381 aa6.87□□□□□ -1.31
SMG6-219ENST00000575663 TPRNQ4KMQ1 711 aa6.87□□□□□ -1.31
SMG6-219ENST00000575663 PAN2Q504Q3 1202 aaKnown RBP6.87□□□□□ -1.31
SMG6-219ENST00000575663 SPOUT1Q5T280 376 aaKnown RBP6.87□□□□□ -1.31
SMG6-219ENST00000575663 ANKRD54Q6NXT1 300 aa6.87□□□□□ -1.31
SMG6-219ENST00000575663 TAF2Q6P1X5 1199 aa6.87□□□□□ -1.31
SMG6-219ENST00000575663 ZC3H14Q6PJT7 736 aaKnown RBP6.87□□□□□ -1.31
SMG6-219ENST00000575663 TSHZ1Q6ZSZ6 1077 aa6.87□□□□□ -1.31
SMG6-219ENST00000575663 KIAA2013Q8IYS2 634 aa6.87□□□□□ -1.31
SMG6-219ENST00000575663 TDRD5Q8NAT2 981 aaKnown RBP6.87□□□□□ -1.31
SMG6-219ENST00000575663 FLCNQ8NFG4 579 aa6.87□□□□□ -1.31
SMG6-219ENST00000575663 ATP8B4Q8TF62 1192 aa6.87□□□□□ -1.31
SMG6-219ENST00000575663 FTHL17Q9BXU8 183 aa6.87□□□□□ -1.31
SMG6-219ENST00000575663 RNPEPQ9H4A4 650 aa6.87□□□□□ -1.31
SMG6-219ENST00000575663 SETD4Q9NVD3 440 aa6.87□□□□□ -1.31
SMG6-219ENST00000575663 COL20A1Q9P218 1284 aa6.87□□□□□ -1.31
SMG6-219ENST00000575663 PCDHB12Q9Y5F1 795 aa6.87□□□□□ -1.31
SMG6-219ENST00000575663 PCDHGC5Q9Y5F6 944 aa6.87□□□□□ -1.31
SMG6-219ENST00000575663 NLRC5Q86WI3 1866 aa6.87□□□□□ -1.31
SMG6-219ENST00000575663 CACNA1HO95180 2353 aa6.87□□□□□ -1.31
SMG6-219ENST00000575663 NRCAMQ92823 1304 aa6.86□□□□□ -1.31
SMG6-219ENST00000575663 RBAK-RBAKDNI3L0D1 243 aa6.86□□□□□ -1.31
SMG6-219ENST00000575663 ENPP3O14638 875 aa6.86□□□□□ -1.31
SMG6-219ENST00000575663 PER2O15055 1255 aa6.86□□□□□ -1.31
SMG6-219ENST00000575663 DHX16O60231 1041 aaKnown RBP6.86□□□□□ -1.31
SMG6-219ENST00000575663 CFBP00751 764 aa6.86□□□□□ -1.31
SMG6-219ENST00000575663 SNHG28P0DPA3 235 aa6.86□□□□□ -1.31
SMG6-219ENST00000575663 MYCLP12524 364 aaPredicted RBP6.86□□□□□ -1.31
SMG6-219ENST00000575663 AOC1P19801 751 aa6.86□□□□□ -1.31
SMG6-219ENST00000575663 LPIN1Q14693 890 aa6.86□□□□□ -1.31
SMG6-219ENST00000575663 GNPTABQ3T906 1256 aa6.86□□□□□ -1.31
SMG6-219ENST00000575663 RRP12Q5JTH9 1297 aaKnown RBP6.86□□□□□ -1.31
SMG6-219ENST00000575663 CWF19L1Q69YN2 538 aaKnown RBP6.86□□□□□ -1.31
SMG6-219ENST00000575663 CES5AQ6NT32 575 aa6.86□□□□□ -1.31
SMG6-219ENST00000575663 TMEM184AQ6ZMB5 413 aa6.86□□□□□ -1.31
SMG6-219ENST00000575663 CCDC105Q8IYK2 499 aa6.86□□□□□ -1.31
SMG6-219ENST00000575663 THNSL1Q8IYQ7 743 aa6.86□□□□□ -1.31
SMG6-219ENST00000575663 LMBR1Q8WVP7 490 aa6.86□□□□□ -1.31
SMG6-219ENST00000575663 RTP3Q9BQQ7 232 aa6.86□□□□□ -1.31
SMG6-219ENST00000575663 OSBPL7Q9BZF2 842 aa6.86□□□□□ -1.31
SMG6-219ENST00000575663 CHMP4BQ9H444 224 aaKnown RBP6.86□□□□□ -1.31
SMG6-219ENST00000575663 EHMT1Q9H9B1 1298 aa6.86□□□□□ -1.31
SMG6-219ENST00000575663 TCP11L1Q9NUJ3 509 aa6.86□□□□□ -1.31
SMG6-219ENST00000575663 RNF216Q9NWF9 866 aaPredicted RBP6.86□□□□□ -1.31
SMG6-219ENST00000575663 LRFN2Q9ULH4 789 aa6.86□□□□□ -1.31
SMG6-219ENST00000575663 TRIP12Q14669 1992 aaPredicted RBP6.86□□□□□ -1.31
SMG6-219ENST00000575663 C2CD4DB7Z1M9 353 aa6.85□□□□□ -1.31
SMG6-219ENST00000575663 M0QZ92 97 aa6.85□□□□□ -1.31
SMG6-219ENST00000575663 PPFIA3O75145 1194 aa6.85□□□□□ -1.31
SMG6-219ENST00000575663 CHRNA1P02708 482 aa6.85□□□□□ -1.31
SMG6-219ENST00000575663 MS4A1P11836 297 aa6.85□□□□□ -1.31
SMG6-219ENST00000575663 SCG2P13521 617 aa6.85□□□□□ -1.31
SMG6-219ENST00000575663 SDHBP21912 280 aa6.85□□□□□ -1.31
SMG6-219ENST00000575663 RFX1P22670 979 aa6.85□□□□□ -1.31
SMG6-219ENST00000575663 CCND2P30279 289 aa6.85□□□□□ -1.31
SMG6-219ENST00000575663 ITIH3Q06033 890 aa6.85□□□□□ -1.31
SMG6-219ENST00000575663 MGAT3Q09327 533 aa6.85□□□□□ -1.31
SMG6-219ENST00000575663 ST3GAL2Q16842 350 aa6.85□□□□□ -1.31
SMG6-219ENST00000575663 FBXO47Q5MNV8 452 aa6.85□□□□□ -1.31
SMG6-219ENST00000575663 PLPP4Q5VZY2 271 aa6.85□□□□□ -1.31
SMG6-219ENST00000575663 LLGL2Q6P1M3 1020 aa6.85□□□□□ -1.31
SMG6-219ENST00000575663 PLCD3Q8N3E9 789 aa6.85□□□□□ -1.31
SMG6-219ENST00000575663 VN1R2Q8NFZ6 395 aa6.85□□□□□ -1.31
SMG6-219ENST00000575663 CYP2W1Q8TAV3 490 aa6.85□□□□□ -1.31
SMG6-219ENST00000575663 RASGRP4Q8TDF6 673 aa6.85□□□□□ -1.31
SMG6-219ENST00000575663 TBC1D5Q92609 795 aa6.85□□□□□ -1.31
SMG6-219ENST00000575663 RUBCNQ92622 972 aa6.85□□□□□ -1.31
SMG6-219ENST00000575663 CASP10Q92851 521 aa6.85□□□□□ -1.31
SMG6-219ENST00000575663 TTC14Q96N46 770 aa6.85□□□□□ -1.31
SMG6-219ENST00000575663 SEC62Q99442 399 aaKnown RBP6.85□□□□□ -1.31
SMG6-219ENST00000575663 PDCD2LQ9BRP1 358 aa6.85□□□□□ -1.31
SMG6-219ENST00000575663 APOL5Q9BWW9 433 aa6.85□□□□□ -1.31
SMG6-219ENST00000575663 S1PR5Q9H228 398 aa6.85□□□□□ -1.31
SMG6-219ENST00000575663 ENTPD7Q9NQZ7 604 aa6.85□□□□□ -1.31
SMG6-219ENST00000575663 DLL3Q9NYJ7 618 aa6.85□□□□□ -1.31
SMG6-219ENST00000575663 MAP3K20Q9NYL2 800 aaKnown RBP6.85□□□□□ -1.31
SMG6-219ENST00000575663 PUF60Q9UHX1 559 aaKnown RBP6.85□□□□□ -1.31
SMG6-219ENST00000575663 ANAPC4Q9UJX5 808 aa6.85□□□□□ -1.31
SMG6-219ENST00000575663 DDX19BQ9UMR2 479 aa6.85□□□□□ -1.31
SMG6-219ENST00000575663 MYH7P12883 1935 aa6.85□□□□□ -1.31
SMG6-219ENST00000575663 PTPRZ1P23471 2315 aaPredicted RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms