RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 CDHR1Q96JP9 859 aa10.38□□□□□ -0.75
NDE1-207ENST00000573203 KIF2CQ99661 725 aa10.38□□□□□ -0.75
NDE1-207ENST00000573203 ANP32EQ9BTT0 268 aa10.38□□□□□ -0.75
NDE1-207ENST00000573203 WNT8AQ9H1J5 351 aa10.38□□□□□ -0.75
NDE1-207ENST00000573203 BCAS3Q9H6U6 928 aa10.38□□□□□ -0.75
NDE1-207ENST00000573203 NCOA5Q9HCD5 579 aaKnown RBP10.38□□□□□ -0.75
NDE1-207ENST00000573203 HDAC6Q9UBN7 1215 aa10.38□□□□□ -0.75
NDE1-207ENST00000573203 SCN5AQ14524 2016 aa10.38□□□□□ -0.75
NDE1-207ENST00000573203 HAS3O00219 553 aa10.37□□□□□ -0.75
NDE1-207ENST00000573203 PPFIA3O75145 1194 aa10.37□□□□□ -0.75
NDE1-207ENST00000573203 FGBP02675 491 aa10.37□□□□□ -0.75
NDE1-207ENST00000573203 EVCP57679 992 aa10.37□□□□□ -0.75
NDE1-207ENST00000573203 ANAPC15P60006 121 aa10.37□□□□□ -0.75
NDE1-207ENST00000573203 SMAD3P84022 425 aaKnown RBP10.37□□□□□ -0.75
NDE1-207ENST00000573203 SP4Q02446 784 aa10.37□□□□□ -0.75
NDE1-207ENST00000573203 BFSP2Q13515 415 aa10.37□□□□□ -0.75
NDE1-207ENST00000573203 MTMR1Q13613 665 aa10.37□□□□□ -0.75
NDE1-207ENST00000573203 GDF6Q6KF10 455 aaPredicted RBP10.37□□□□□ -0.75
NDE1-207ENST00000573203 C16orf59Q7L2K0 433 aa10.37□□□□□ -0.75
NDE1-207ENST00000573203 RPUSD2Q8IZ73 545 aaKnown RBP10.37□□□□□ -0.75
NDE1-207ENST00000573203 CCDC155Q8N6L0 562 aa10.37□□□□□ -0.75
NDE1-207ENST00000573203 GIMAP8Q8ND71 665 aaPredicted RBP10.37□□□□□ -0.75
NDE1-207ENST00000573203 CCDC12Q8WUD4 166 aaPredicted RBP10.37□□□□□ -0.75
NDE1-207ENST00000573203 DDX27Q96GQ7 796 aaKnown RBP10.37□□□□□ -0.75
NDE1-207ENST00000573203 PGBD1Q96JS3 809 aa10.37□□□□□ -0.75
NDE1-207ENST00000573203 SENP7Q9BQF6 1050 aa10.37□□□□□ -0.75
NDE1-207ENST00000573203 LARP6Q9BRS8 491 aaKnown RBP10.37□□□□□ -0.75
NDE1-207ENST00000573203 SLC26A6Q9BXS9 759 aa10.37□□□□□ -0.75
NDE1-207ENST00000573203 RNF26Q9BY78 433 aaPredicted RBP10.37□□□□□ -0.75
NDE1-207ENST00000573203 ANO3Q9BYT9 981 aa10.37□□□□□ -0.75
NDE1-207ENST00000573203 TANC1Q9C0D5 1861 aa10.37□□□□□ -0.75
NDE1-207ENST00000573203 MTIF3Q9H2K0 278 aaKnown RBP10.37□□□□□ -0.75
NDE1-207ENST00000573203 PDRG1Q9NUG6 133 aa10.37□□□□□ -0.75
NDE1-207ENST00000573203 GTF2IRD1Q9UHL9 959 aa10.37□□□□□ -0.75
NDE1-207ENST00000573203 UBIAD1Q9Y5Z9 338 aa10.37□□□□□ -0.75
NDE1-207ENST00000573203 POTEB3A0JP26 581 aa10.36□□□□□ -0.75
NDE1-207ENST00000573203 H3BRB1 525 aa10.36□□□□□ -0.75
NDE1-207ENST00000573203 CPLX1O14810 134 aa10.36□□□□□ -0.75
NDE1-207ENST00000573203 LGALS2P05162 132 aa10.36□□□□□ -0.75
NDE1-207ENST00000573203 KCNA2P16389 499 aa10.36□□□□□ -0.75
NDE1-207ENST00000573203 IFNAR1P17181 557 aa10.36□□□□□ -0.75
NDE1-207ENST00000573203 ITGB5P18084 799 aa10.36□□□□□ -0.75
NDE1-207ENST00000573203 STK3Q13188 491 aa10.36□□□□□ -0.75
NDE1-207ENST00000573203 AP3B2Q13367 1082 aa10.36□□□□□ -0.75
NDE1-207ENST00000573203 RABEP1Q15276 862 aa10.36□□□□□ -0.75
NDE1-207ENST00000573203 NTRK3Q16288 839 aa10.36□□□□□ -0.75
NDE1-207ENST00000573203 PKN1Q16512 942 aa10.36□□□□□ -0.75
NDE1-207ENST00000573203 UTP14CQ5TAP6 766 aaKnown RBP10.36□□□□□ -0.75
NDE1-207ENST00000573203 ZNF697Q5TEC3 545 aa10.36□□□□□ -0.75
NDE1-207ENST00000573203 JAKMIP3Q5VZ66 844 aa10.36□□□□□ -0.75
NDE1-207ENST00000573203 POTEBQ6S5H4 581 aa10.36□□□□□ -0.75
NDE1-207ENST00000573203 DEFB128Q7Z7B8 93 aa10.36□□□□□ -0.75
NDE1-207ENST00000573203 TRIM22Q8IYM9 498 aa10.36□□□□□ -0.75
NDE1-207ENST00000573203 CAGE1Q8TC20 777 aa10.36□□□□□ -0.75
NDE1-207ENST00000573203 ZNF274Q96GC6 653 aaPredicted RBP10.36□□□□□ -0.75
NDE1-207ENST00000573203 GPR20Q99678 358 aa10.36□□□□□ -0.75
NDE1-207ENST00000573203 C16orf70Q9BSU1 422 aa10.36□□□□□ -0.75
NDE1-207ENST00000573203 TUT1Q9H6E5 874 aaKnown RBP10.36□□□□□ -0.75
NDE1-207ENST00000573203 C6orf50Q9HD87 102 aa10.36□□□□□ -0.75
NDE1-207ENST00000573203 JADE2Q9NQC1 790 aa10.36□□□□□ -0.75
NDE1-207ENST00000573203 TMEM260Q9NX78 707 aa10.36□□□□□ -0.75
NDE1-207ENST00000573203 PKD2L1Q9P0L9 805 aa10.36□□□□□ -0.75
NDE1-207ENST00000573203 KAT6AQ92794 2004 aa10.36□□□□□ -0.75
NDE1-207ENST00000573203 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.35□□□□□ -0.75
NDE1-207ENST00000573203 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.35□□□□□ -0.75
NDE1-207ENST00000573203 ESYT2A0FGR8 921 aa10.35□□□□□ -0.75
NDE1-207ENST00000573203 MAFGO15525 162 aa10.35□□□□□ -0.75
NDE1-207ENST00000573203 ATP9AO75110 1047 aa10.35□□□□□ -0.75
NDE1-207ENST00000573203 PFKMP08237 780 aa10.35□□□□□ -0.75
NDE1-207ENST00000573203 IQCF3P0C7M6 154 aa10.35□□□□□ -0.75
NDE1-207ENST00000573203 GNA11P29992 359 aa10.35□□□□□ -0.75
NDE1-207ENST00000573203 RFC2P35250 354 aa10.35□□□□□ -0.75
NDE1-207ENST00000573203 ZNF76P36508 570 aa10.35□□□□□ -0.75
NDE1-207ENST00000573203 SREBF1P36956 1147 aa10.35□□□□□ -0.75
NDE1-207ENST00000573203 CLK2P49760 499 aaKnown RBP10.35□□□□□ -0.75
NDE1-207ENST00000573203 ZNF200P98182 395 aaPredicted RBP10.35□□□□□ -0.75
NDE1-207ENST00000573203 SSRP1Q08945 709 aaKnown RBP10.35□□□□□ -0.75
NDE1-207ENST00000573203 MCTP2Q6DN12 878 aa10.35□□□□□ -0.75
NDE1-207ENST00000573203 FAM109BQ6ICB4 259 aaPredicted RBP10.35□□□□□ -0.75
NDE1-207ENST00000573203 CPLX2Q6PUV4 134 aaKnown RBP10.35□□□□□ -0.75
NDE1-207ENST00000573203 OTOP2Q7RTS6 562 aa10.35□□□□□ -0.75
NDE1-207ENST00000573203 CCDC148Q8NFR7 591 aa10.35□□□□□ -0.75
NDE1-207ENST00000573203 BICD2Q8TD16 824 aa10.35□□□□□ -0.75
NDE1-207ENST00000573203 OXER1Q8TDS5 423 aa10.35□□□□□ -0.75
NDE1-207ENST00000573203 HERVK_113Q902F9 699 aa10.35□□□□□ -0.75
NDE1-207ENST00000573203 MXRA8Q9BRK3 442 aa10.35□□□□□ -0.75
NDE1-207ENST00000573203 ZMYND12Q9H0C1 365 aa10.35□□□□□ -0.75
NDE1-207ENST00000573203 MTMR10Q9NXD2 777 aa10.35□□□□□ -0.75
NDE1-207ENST00000573203 ZNF215Q9UL58 517 aaPredicted RBP10.35□□□□□ -0.75
NDE1-207ENST00000573203 C17orf102A2RUQ5 167 aa10.34□□□□□ -0.75
NDE1-207ENST00000573203 ZBBXA8MT70 800 aa10.34□□□□□ -0.75
NDE1-207ENST00000573203 SMIM10L2AP0DMW4 78 aa10.34□□□□□ -0.75
NDE1-207ENST00000573203 SMIM10L2BP0DMW5 78 aa10.34□□□□□ -0.75
NDE1-207ENST00000573203 ACTN1P12814 892 aa10.34□□□□□ -0.75
NDE1-207ENST00000573203 TCF7P36402 384 aaPredicted RBP10.34□□□□□ -0.75
NDE1-207ENST00000573203 ARHGAP4P98171 946 aa10.34□□□□□ -0.75
NDE1-207ENST00000573203 PTK7Q13308 1070 aa10.34□□□□□ -0.75
NDE1-207ENST00000573203 CEP55Q53EZ4 464 aa10.34□□□□□ -0.75
NDE1-207ENST00000573203 VARS2Q5ST30 1063 aaKnown RBP10.34□□□□□ -0.75
NDE1-207ENST00000573203 RASIP1Q5U651 963 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms