RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 CLEC4DQ8WXI8 215 aa20.09■□□□□ 0.81
SMPD3-211ENST00000568373 CEP63Q96MT8 703 aa20.09■□□□□ 0.81
SMPD3-211ENST00000568373 BHMT2Q9H2M3 363 aa20.09■□□□□ 0.81
SMPD3-211ENST00000568373 KCTD10Q9H3F6 313 aa20.09■□□□□ 0.81
SMPD3-211ENST00000568373 RBBP6Q7Z6E9 1792 aaKnown RBP20.09■□□□□ 0.81
SMPD3-211ENST00000568373 A0A1W2PQJ5 194 aa20.09■□□□□ 0.81
SMPD3-211ENST00000568373 NFIBO00712 420 aa20.09■□□□□ 0.81
SMPD3-211ENST00000568373 GHRHRQ02643 423 aa20.09■□□□□ 0.81
SMPD3-211ENST00000568373 DGKZQ13574 1117 aa20.09■□□□□ 0.81
SMPD3-211ENST00000568373 WDR59Q6PJI9 974 aa20.09■□□□□ 0.81
SMPD3-211ENST00000568373 NELFCDQ8IXH7 590 aa20.09■□□□□ 0.81
SMPD3-211ENST00000568373 ZNF577Q9BSK1 485 aa20.09■□□□□ 0.81
SMPD3-211ENST00000568373 TANGO6Q9C0B7 1094 aa20.09■□□□□ 0.81
SMPD3-211ENST00000568373 PDCL3Q9H2J4 239 aa20.09■□□□□ 0.81
SMPD3-211ENST00000568373 SLC38A10Q9HBR0 1119 aa20.09■□□□□ 0.81
SMPD3-211ENST00000568373 COL4A3BPQ9Y5P4 624 aa20.09■□□□□ 0.81
SMPD3-211ENST00000568373 DOCK1Q14185 1865 aa20.08■□□□□ 0.81
SMPD3-211ENST00000568373 A0A0U1RQJ8 604 aa20.08■□□□□ 0.81
SMPD3-211ENST00000568373 URI1O94763 535 aaPredicted RBP20.08■□□□□ 0.81
SMPD3-211ENST00000568373 VCAM1P19320 739 aa20.08■□□□□ 0.81
SMPD3-211ENST00000568373 MTMR2Q13614 643 aa20.08■□□□□ 0.81
SMPD3-211ENST00000568373 DCAF15Q66K64 600 aa20.08■□□□□ 0.81
SMPD3-211ENST00000568373 SLC30A10Q6XR72 485 aa20.08■□□□□ 0.81
SMPD3-211ENST00000568373 MCF2L2Q86YR7 1114 aa20.08■□□□□ 0.81
SMPD3-211ENST00000568373 ATRIPQ8WXE1 791 aa20.08■□□□□ 0.81
SMPD3-211ENST00000568373 WDR11Q9BZH6 1224 aa20.08■□□□□ 0.81
SMPD3-211ENST00000568373 SIK3Q9Y2K2 1263 aa20.08■□□□□ 0.81
SMPD3-211ENST00000568373 EPN1Q9Y6I3 576 aaPredicted RBP20.08■□□□□ 0.81
SMPD3-211ENST00000568373 RPTORQ8N122 1335 aa20.08■□□□□ 0.8
SMPD3-211ENST00000568373 CHMP2AO43633 222 aa20.07■□□□□ 0.8
SMPD3-211ENST00000568373 SLITRK3O94933 977 aa20.07■□□□□ 0.8
SMPD3-211ENST00000568373 NDUFA10O95299 355 aa20.07■□□□□ 0.8
SMPD3-211ENST00000568373 ARP10275 920 aa20.07■□□□□ 0.8
SMPD3-211ENST00000568373 CTTNQ14247 550 aaKnown RBP20.07■□□□□ 0.8
SMPD3-211ENST00000568373 PPP4R3CPQ6ZMV5 832 aa20.07■□□□□ 0.8
SMPD3-211ENST00000568373 KRT26Q7Z3Y9 468 aa20.07■□□□□ 0.8
SMPD3-211ENST00000568373 COL20A1Q9P218 1284 aa20.07■□□□□ 0.8
SMPD3-211ENST00000568373 ZNF541Q9H0D2 1346 aa20.07■□□□□ 0.8
SMPD3-211ENST00000568373 KIF5CO60282 957 aa20.07■□□□□ 0.8
SMPD3-211ENST00000568373 FLOT1O75955 427 aa20.07■□□□□ 0.8
SMPD3-211ENST00000568373 GNA14O95837 355 aa20.07■□□□□ 0.8
SMPD3-211ENST00000568373 USP14P54578 494 aa20.07■□□□□ 0.8
SMPD3-211ENST00000568373 SFR1Q86XK3 245 aa20.07■□□□□ 0.8
SMPD3-211ENST00000568373 ZC3H3Q8IXZ2 948 aaKnown RBP20.07■□□□□ 0.8
SMPD3-211ENST00000568373 CPXCR1Q8N123 301 aa20.07■□□□□ 0.8
SMPD3-211ENST00000568373 ZNF397Q8NF99 534 aaPredicted RBP20.07■□□□□ 0.8
SMPD3-211ENST00000568373 DYDC2Q96IM9 177 aa20.07■□□□□ 0.8
SMPD3-211ENST00000568373 ZFP91Q96JP5 570 aaPredicted RBP20.07■□□□□ 0.8
SMPD3-211ENST00000568373 MXRA8Q9BRK3 442 aa20.07■□□□□ 0.8
SMPD3-211ENST00000568373 RUSC1Q9BVN2 902 aa20.07■□□□□ 0.8
SMPD3-211ENST00000568373 IRX2Q9BZI1 471 aaPredicted RBP20.07■□□□□ 0.8
SMPD3-211ENST00000568373 PPP1R9AQ9ULJ8 1098 aa20.07■□□□□ 0.8
SMPD3-211ENST00000568373 MUTP22033 750 aa20.06■□□□□ 0.8
SMPD3-211ENST00000568373 CASP5P51878 434 aa20.06■□□□□ 0.8
SMPD3-211ENST00000568373 ARHGAP29Q52LW3 1261 aa20.06■□□□□ 0.8
SMPD3-211ENST00000568373 TPH2Q8IWU9 490 aa20.06■□□□□ 0.8
SMPD3-211ENST00000568373 RAVER2Q9HCJ3 691 aaKnown RBP20.06■□□□□ 0.8
SMPD3-211ENST00000568373 ZNHIT6Q9NWK9 470 aaKnown RBP20.06■□□□□ 0.8
SMPD3-211ENST00000568373 IPO5O00410 1097 aaKnown RBP20.06■□□□□ 0.8
SMPD3-211ENST00000568373 ALAS1P13196 640 aa20.06■□□□□ 0.8
SMPD3-211ENST00000568373 MARSP56192 900 aaKnown RBP20.06■□□□□ 0.8
SMPD3-211ENST00000568373 EDRF1Q3B7T1 1238 aa20.06■□□□□ 0.8
SMPD3-211ENST00000568373 CCDC40Q4G0X9 1142 aa20.06■□□□□ 0.8
SMPD3-211ENST00000568373 B3GNT9Q6UX72 402 aa20.06■□□□□ 0.8
SMPD3-211ENST00000568373 EPM2AIP1Q7L775 607 aaPredicted RBP20.06■□□□□ 0.8
SMPD3-211ENST00000568373 SCYL3Q8IZE3 742 aa20.06■□□□□ 0.8
SMPD3-211ENST00000568373 PIGOQ8TEQ8 1089 aa20.06■□□□□ 0.8
SMPD3-211ENST00000568373 RIT2Q99578 217 aa20.06■□□□□ 0.8
SMPD3-211ENST00000568373 SYT17Q9BSW7 474 aa20.06■□□□□ 0.8
SMPD3-211ENST00000568373 TEKT3Q9BXF9 490 aa20.06■□□□□ 0.8
SMPD3-211ENST00000568373 UNC45AQ9H3U1 944 aa20.06■□□□□ 0.8
SMPD3-211ENST00000568373 TBCAO75347 108 aaKnown RBP20.05■□□□□ 0.8
SMPD3-211ENST00000568373 BCRP11274 1271 aa20.05■□□□□ 0.8
SMPD3-211ENST00000568373 ITGB5P18084 799 aa20.05■□□□□ 0.8
SMPD3-211ENST00000568373 RINT1Q6NUQ1 792 aa20.05■□□□□ 0.8
SMPD3-211ENST00000568373 APOBEC3FQ8IUX4 373 aaKnown RBP20.05■□□□□ 0.8
SMPD3-211ENST00000568373 RPAP3Q9H6T3 665 aaPredicted RBP20.05■□□□□ 0.8
SMPD3-211ENST00000568373 MAP3K20Q9NYL2 800 aaKnown RBP20.05■□□□□ 0.8
SMPD3-211ENST00000568373 ZNF112Q9UJU3 913 aa20.05■□□□□ 0.8
SMPD3-211ENST00000568373 RSPH10B2B2RC85 870 aa20.04■□□□□ 0.8
SMPD3-211ENST00000568373 RSPH10BP0C881 870 aa20.04■□□□□ 0.8
SMPD3-211ENST00000568373 ERCC3P19447 782 aa20.04■□□□□ 0.8
SMPD3-211ENST00000568373 SPP2Q13103 211 aa20.04■□□□□ 0.8
SMPD3-211ENST00000568373 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.04■□□□□ 0.8
SMPD3-211ENST00000568373 PNMA2Q9UL42 364 aa20.04■□□□□ 0.8
SMPD3-211ENST00000568373 REXO2Q9Y3B8 237 aaKnown RBP20.04■□□□□ 0.8
SMPD3-211ENST00000568373 V9GYY5 206 aaPredicted RBP20.04■□□□□ 0.8
SMPD3-211ENST00000568373 ARHGAP25P42331 645 aa20.04■□□□□ 0.8
SMPD3-211ENST00000568373 BACE1P56817 501 aa20.04■□□□□ 0.8
SMPD3-211ENST00000568373 MAP3K9P80192 1104 aa20.04■□□□□ 0.8
SMPD3-211ENST00000568373 CDK17Q00537 523 aa20.04■□□□□ 0.8
SMPD3-211ENST00000568373 EPHA7Q15375 998 aa20.04■□□□□ 0.8
SMPD3-211ENST00000568373 KNOP1Q1ED39 458 aaKnown RBP20.04■□□□□ 0.8
SMPD3-211ENST00000568373 MUM1L1Q5H9M0 696 aa20.04■□□□□ 0.8
SMPD3-211ENST00000568373 ANGEL2Q5VTE6 544 aaKnown RBP20.04■□□□□ 0.8
SMPD3-211ENST00000568373 NIPA1Q7RTP0 329 aa20.04■□□□□ 0.8
SMPD3-211ENST00000568373 PDCL2Q8N4E4 241 aa20.04■□□□□ 0.8
SMPD3-211ENST00000568373 SAMD3Q8N6K7 520 aa20.04■□□□□ 0.8
SMPD3-211ENST00000568373 LRRN4CLQ8ND94 238 aa20.04■□□□□ 0.8
SMPD3-211ENST00000568373 HOMER2Q9NSB8 354 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms