RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 VPS54Q9P1Q0 977 aa6□□□□□ -1.45
LINC01541-202ENST00000568095 TMEM59LQ9UK28 342 aa6□□□□□ -1.45
LINC01541-202ENST00000568095 SLC12A4Q9UP95 1085 aa6□□□□□ -1.45
LINC01541-202ENST00000568095 TRIM75PA6NK02 468 aa6□□□□□ -1.45
LINC01541-202ENST00000568095 TACC1O75410 805 aa6□□□□□ -1.45
LINC01541-202ENST00000568095 ALDH1B1P30837 517 aa6□□□□□ -1.45
LINC01541-202ENST00000568095 CARSP49589 748 aaKnown RBP6□□□□□ -1.45
LINC01541-202ENST00000568095 CCNG1P51959 295 aa6□□□□□ -1.45
LINC01541-202ENST00000568095 CLNS1AP54105 237 aaKnown RBP6□□□□□ -1.45
LINC01541-202ENST00000568095 ATP2B2Q01814 1243 aa6□□□□□ -1.45
LINC01541-202ENST00000568095 MECOMQ03112 1051 aa6□□□□□ -1.45
LINC01541-202ENST00000568095 KIF5AQ12840 1032 aa6□□□□□ -1.45
LINC01541-202ENST00000568095 SLMAPQ14BN4 828 aa6□□□□□ -1.45
LINC01541-202ENST00000568095 QPCTQ16769 361 aa6□□□□□ -1.45
LINC01541-202ENST00000568095 EARS2Q5JPH6 523 aaKnown RBP6□□□□□ -1.45
LINC01541-202ENST00000568095 RNF187Q5TA31 235 aaPredicted RBP6□□□□□ -1.45
LINC01541-202ENST00000568095 AGBL2Q5U5Z8 902 aa6□□□□□ -1.45
LINC01541-202ENST00000568095 CC2D2BQ6DHV5 1058 aa6□□□□□ -1.45
LINC01541-202ENST00000568095 LCORLQ8N3X6 602 aa6□□□□□ -1.45
LINC01541-202ENST00000568095 ARFGAP2Q8N6H7 521 aa6□□□□□ -1.45
LINC01541-202ENST00000568095 MAGEB6Q8N7X4 407 aa6□□□□□ -1.45
LINC01541-202ENST00000568095 ARMC2Q8NEN0 867 aa6□□□□□ -1.45
LINC01541-202ENST00000568095 L3MBTL3Q96JM7 780 aaPredicted RBP6□□□□□ -1.45
LINC01541-202ENST00000568095 MS4A4AQ96JQ5 239 aa6□□□□□ -1.45
LINC01541-202ENST00000568095 TLR10Q9BXR5 811 aa6□□□□□ -1.45
LINC01541-202ENST00000568095 TSKSQ9UJT2 592 aa6□□□□□ -1.45
LINC01541-202ENST00000568095 GGA1Q9UJY5 639 aa6□□□□□ -1.45
LINC01541-202ENST00000568095 PLAGL2Q9UPG8 496 aa6□□□□□ -1.45
LINC01541-202ENST00000568095 TMEM88BA6NKF7 163 aa5.99□□□□□ -1.45
LINC01541-202ENST00000568095 B4E1Z4 1266 aa5.99□□□□□ -1.45
LINC01541-202ENST00000568095 RBAK-RBAKDNI3L0D1 243 aa5.99□□□□□ -1.45
LINC01541-202ENST00000568095 CES2O00748 559 aa5.99□□□□□ -1.45
LINC01541-202ENST00000568095 WNT7AO00755 349 aa5.99□□□□□ -1.45
LINC01541-202ENST00000568095 RPN1P04843 607 aaKnown RBP5.99□□□□□ -1.45
LINC01541-202ENST00000568095 PRDX5P30044 214 aa5.99□□□□□ -1.45
LINC01541-202ENST00000568095 FKBP1AP62942 108 aaKnown RBP5.99□□□□□ -1.45
LINC01541-202ENST00000568095 FUT2Q10981 343 aa5.99□□□□□ -1.45
LINC01541-202ENST00000568095 BIRC3Q13489 604 aa5.99□□□□□ -1.45
LINC01541-202ENST00000568095 NPY5RQ15761 445 aa5.99□□□□□ -1.45
LINC01541-202ENST00000568095 PKN1Q16512 942 aa5.99□□□□□ -1.45
LINC01541-202ENST00000568095 CAVIN4Q5BKX8 364 aa5.99□□□□□ -1.45
LINC01541-202ENST00000568095 TMEM67Q5HYA8 995 aa5.99□□□□□ -1.45
LINC01541-202ENST00000568095 MIIPQ5JXC2 388 aa5.99□□□□□ -1.45
LINC01541-202ENST00000568095 KLHDC7AQ5VTJ3 777 aa5.99□□□□□ -1.45
LINC01541-202ENST00000568095 TTI2Q6NXR4 508 aa5.99□□□□□ -1.45
LINC01541-202ENST00000568095 C8orf74Q6P047 294 aa5.99□□□□□ -1.45
LINC01541-202ENST00000568095 NFRKBQ6P4R8 1299 aa5.99□□□□□ -1.45
LINC01541-202ENST00000568095 RNF10Q8N5U6 811 aaKnown RBP5.99□□□□□ -1.45
LINC01541-202ENST00000568095 CASKIN2Q8WXE0 1202 aa5.99□□□□□ -1.45
LINC01541-202ENST00000568095 CUL5Q93034 780 aa5.99□□□□□ -1.45
LINC01541-202ENST00000568095 FAM163AQ96GL9 167 aaPredicted RBP5.99□□□□□ -1.45
LINC01541-202ENST00000568095 CABP5Q9NP86 173 aa5.99□□□□□ -1.45
LINC01541-202ENST00000568095 ZNHIT6Q9NWK9 470 aaKnown RBP5.99□□□□□ -1.45
LINC01541-202ENST00000568095 ZSWIM5Q9P217 1185 aa5.99□□□□□ -1.45
LINC01541-202ENST00000568095 LRWD1Q9UFC0 647 aa5.99□□□□□ -1.45
LINC01541-202ENST00000568095 PCDHA13Q9Y5I0 950 aa5.99□□□□□ -1.45
LINC01541-202ENST00000568095 SLC12A7Q9Y666 1083 aa5.99□□□□□ -1.45
LINC01541-202ENST00000568095 COL2A1P02458 1487 aaPredicted RBP5.99□□□□□ -1.45
LINC01541-202ENST00000568095 E7EVH7 732 aa5.99□□□□□ -1.45
LINC01541-202ENST00000568095 KLRC4O43908 158 aa5.99□□□□□ -1.45
LINC01541-202ENST00000568095 ORC4O43929 436 aa5.99□□□□□ -1.45
LINC01541-202ENST00000568095 COBLO75128 1261 aa5.99□□□□□ -1.45
LINC01541-202ENST00000568095 SMNDC1O75940 238 aaKnown RBP eCLIP5.99□□□□□ -1.45
LINC01541-202ENST00000568095 UFL1O94874 794 aa5.99□□□□□ -1.45
LINC01541-202ENST00000568095 DRD4P21917 467 aa5.99□□□□□ -1.45
LINC01541-202ENST00000568095 OSBPP22059 807 aa5.99□□□□□ -1.45
LINC01541-202ENST00000568095 CHRNA5P30532 468 aa5.99□□□□□ -1.45
LINC01541-202ENST00000568095 PMS1P54277 932 aaKnown RBP5.99□□□□□ -1.45
LINC01541-202ENST00000568095 IL17AQ16552 155 aa5.99□□□□□ -1.45
LINC01541-202ENST00000568095 COBLL1Q53SF7 1204 aa5.99□□□□□ -1.45
LINC01541-202ENST00000568095 CERS5Q8N5B7 392 aa5.99□□□□□ -1.45
LINC01541-202ENST00000568095 CCHCR1Q8TD31 782 aa5.99□□□□□ -1.45
LINC01541-202ENST00000568095 DUSP9Q99956 384 aaKnown RBP5.99□□□□□ -1.45
LINC01541-202ENST00000568095 MYL10Q9BUA6 226 aa5.99□□□□□ -1.45
LINC01541-202ENST00000568095 RNF26Q9BY78 433 aaPredicted RBP5.99□□□□□ -1.45
LINC01541-202ENST00000568095 NDST4Q9H3R1 872 aa5.99□□□□□ -1.45
LINC01541-202ENST00000568095 NOD2Q9HC29 1040 aa5.99□□□□□ -1.45
LINC01541-202ENST00000568095 EXOC1Q9NV70 894 aa5.99□□□□□ -1.45
LINC01541-202ENST00000568095 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.99□□□□□ -1.45
LINC01541-202ENST00000568095 F8W031 263 aaPredicted RBP5.99□□□□□ -1.45
LINC01541-202ENST00000568095 MYL1P05976 194 aa5.99□□□□□ -1.45
LINC01541-202ENST00000568095 PPP4CP60510 307 aa5.99□□□□□ -1.45
LINC01541-202ENST00000568095 MAP3K12Q12852 859 aa5.99□□□□□ -1.45
LINC01541-202ENST00000568095 ZNF268Q14587 947 aaPredicted RBP5.99□□□□□ -1.45
LINC01541-202ENST00000568095 PPP2R5BQ15173 497 aa5.99□□□□□ -1.45
LINC01541-202ENST00000568095 UAP1Q16222 522 aaPredicted RBP5.99□□□□□ -1.45
LINC01541-202ENST00000568095 ACCSLQ4AC99 568 aa5.99□□□□□ -1.45
LINC01541-202ENST00000568095 DNAJC14Q6Y2X3 702 aaPredicted RBP5.99□□□□□ -1.45
LINC01541-202ENST00000568095 ZNF804AQ7Z570 1209 aa5.99□□□□□ -1.45
LINC01541-202ENST00000568095 C2CD5Q86YS7 1000 aa5.99□□□□□ -1.45
LINC01541-202ENST00000568095 TRIM22Q8IYM9 498 aa5.99□□□□□ -1.45
LINC01541-202ENST00000568095 SMCR8Q8TEV9 937 aaPredicted RBP5.99□□□□□ -1.45
LINC01541-202ENST00000568095 TCP11Q8WWU5 503 aa5.99□□□□□ -1.45
LINC01541-202ENST00000568095 SH3GL3Q99963 347 aa5.99□□□□□ -1.45
LINC01541-202ENST00000568095 PPP1R12CQ9BZL4 782 aa5.99□□□□□ -1.45
LINC01541-202ENST00000568095 ARHGAP20Q9P2F6 1191 aa5.99□□□□□ -1.45
LINC01541-202ENST00000568095 SALL4Q9UJQ4 1053 aa5.99□□□□□ -1.45
LINC01541-202ENST00000568095 NFU1Q9UMS0 254 aa5.99□□□□□ -1.45
LINC01541-202ENST00000568095 C15orf41Q9Y2V0 281 aa5.99□□□□□ -1.45
LINC01541-202ENST00000568095 SUGT1Q9Y2Z0 365 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms