RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 SYT3Q9BQG1 590 aa6.9□□□□□ -1.3
USP8-218ENST00000561330 C11orf84Q9BUA3 381 aaPredicted RBP6.9□□□□□ -1.3
USP8-218ENST00000561330 KRTAP9-9Q9BYP9 154 aa6.9□□□□□ -1.3
USP8-218ENST00000561330 KRTAP9-4Q9BYQ2 154 aa6.9□□□□□ -1.3
USP8-218ENST00000561330 SMURF1Q9HCE7 757 aa6.9□□□□□ -1.3
USP8-218ENST00000561330 INTS7Q9NVH2 962 aaKnown RBP6.9□□□□□ -1.3
USP8-218ENST00000561330 HSPBP1Q9NZL4 362 aa6.9□□□□□ -1.3
USP8-218ENST00000561330 ZSCAN22P10073 491 aaPredicted RBP6.89□□□□□ -1.31
USP8-218ENST00000561330 FAHP16930 419 aa6.89□□□□□ -1.31
USP8-218ENST00000561330 GJA4P35212 333 aa6.89□□□□□ -1.31
USP8-218ENST00000561330 ITGA1P56199 1179 aa6.89□□□□□ -1.31
USP8-218ENST00000561330 CAP1Q01518 475 aa6.89□□□□□ -1.31
USP8-218ENST00000561330 TMEM177Q53S58 311 aa6.89□□□□□ -1.31
USP8-218ENST00000561330 BTBD8Q5XKL5 378 aa6.89□□□□□ -1.31
USP8-218ENST00000561330 SDE2Q6IQ49 451 aa6.89□□□□□ -1.31
USP8-218ENST00000561330 UBE2R2Q712K3 238 aaPredicted RBP6.89□□□□□ -1.31
USP8-218ENST00000561330 OVCH1Q7RTY7 1134 aa6.89□□□□□ -1.31
USP8-218ENST00000561330 TTLL6Q8N841 843 aa6.89□□□□□ -1.31
USP8-218ENST00000561330 LINC00482Q8N8I6 264 aa6.89□□□□□ -1.31
USP8-218ENST00000561330 KYQ8NBH2 561 aa6.89□□□□□ -1.31
USP8-218ENST00000561330 RIC8BQ9NVN3 520 aa6.89□□□□□ -1.31
USP8-218ENST00000561330 SAMD15Q9P1V8 674 aa6.89□□□□□ -1.31
USP8-218ENST00000561330 PLAAQ9Y263 795 aa6.89□□□□□ -1.31
USP8-218ENST00000561330 KCNK3O14649 394 aa6.88□□□□□ -1.31
USP8-218ENST00000561330 SMARCA5O60264 1052 aaPredicted RBP6.88□□□□□ -1.31
USP8-218ENST00000561330 PTPN1P18031 435 aaKnown RBP6.88□□□□□ -1.31
USP8-218ENST00000561330 HSD3B2P26439 372 aa6.88□□□□□ -1.31
USP8-218ENST00000561330 JAG1P78504 1218 aa6.88□□□□□ -1.31
USP8-218ENST00000561330 SMAD4Q13485 552 aaKnown RBP6.88□□□□□ -1.31
USP8-218ENST00000561330 PLEKHG4Q58EX7 1191 aa6.88□□□□□ -1.31
USP8-218ENST00000561330 TAF7LQ5H9L4 462 aa6.88□□□□□ -1.31
USP8-218ENST00000561330 HHIPL2Q6UWX4 724 aa6.88□□□□□ -1.31
USP8-218ENST00000561330 STK32CQ86UX6 486 aa6.88□□□□□ -1.31
USP8-218ENST00000561330 DHX37Q8IY37 1157 aaKnown RBP6.88□□□□□ -1.31
USP8-218ENST00000561330 NIM1KQ8IY84 436 aa6.88□□□□□ -1.31
USP8-218ENST00000561330 C2orf69Q8N8R5 385 aa6.88□□□□□ -1.31
USP8-218ENST00000561330 TMEM209Q96SK2 561 aa6.88□□□□□ -1.31
USP8-218ENST00000561330 SLC12A8A0AV02 714 aa6.87□□□□□ -1.31
USP8-218ENST00000561330 FAM90A27PA6NNH2 459 aa6.87□□□□□ -1.31
USP8-218ENST00000561330 M0R2C6 588 aa6.87□□□□□ -1.31
USP8-218ENST00000561330 ACOT7O00154 380 aa6.87□□□□□ -1.31
USP8-218ENST00000561330 JMJD7P0C870 316 aa6.87□□□□□ -1.31
USP8-218ENST00000561330 VMACQ2NL98 169 aa6.87□□□□□ -1.31
USP8-218ENST00000561330 KRTAP19-4Q3LI73 84 aa6.87□□□□□ -1.31
USP8-218ENST00000561330 CFAP100Q494V2 611 aa6.87□□□□□ -1.31
USP8-218ENST00000561330 VWA3BQ502W6 1294 aa6.87□□□□□ -1.31
USP8-218ENST00000561330 DALRD3Q5D0E6 543 aaKnown RBP6.87□□□□□ -1.31
USP8-218ENST00000561330 PIK3R6Q5UE93 754 aa6.87□□□□□ -1.31
USP8-218ENST00000561330 VASNQ6EMK4 673 aa6.87□□□□□ -1.31
USP8-218ENST00000561330 TMC5Q6UXY8 1006 aa6.87□□□□□ -1.31
USP8-218ENST00000561330 TTLL7Q6ZT98 887 aa6.87□□□□□ -1.31
USP8-218ENST00000561330 SAPCD2Q86UD0 394 aa6.87□□□□□ -1.31
USP8-218ENST00000561330 SIAH1Q8IUQ4 282 aa6.87□□□□□ -1.31
USP8-218ENST00000561330 FFAR3O14843 346 aa6.86□□□□□ -1.31
USP8-218ENST00000561330 CLASP2O75122 1294 aaKnown RBP6.86□□□□□ -1.31
USP8-218ENST00000561330 GLRX3O76003 335 aaKnown RBP6.86□□□□□ -1.31
USP8-218ENST00000561330 CDCA2Q69YH5 1023 aaPredicted RBP6.86□□□□□ -1.31
USP8-218ENST00000561330 LRRTM3Q86VH5 581 aa6.86□□□□□ -1.31
USP8-218ENST00000561330 LINC01356Q8N9X3 169 aa6.86□□□□□ -1.31
USP8-218ENST00000561330 ZNF526Q8TF50 670 aaPredicted RBP6.86□□□□□ -1.31
USP8-218ENST00000561330 MFSD3Q96ES6 412 aa6.86□□□□□ -1.31
USP8-218ENST00000561330 WNK4Q96J92 1243 aa6.86□□□□□ -1.31
USP8-218ENST00000561330 CLIC6Q96NY7 704 aa6.86□□□□□ -1.31
USP8-218ENST00000561330 CABP5Q9NP86 173 aa6.86□□□□□ -1.31
USP8-218ENST00000561330 RBPJLQ9UBG7 517 aa6.86□□□□□ -1.31
USP8-218ENST00000561330 SCDO00767 359 aa6.85□□□□□ -1.31
USP8-218ENST00000561330 THBS2P35442 1172 aa6.85□□□□□ -1.31
USP8-218ENST00000561330 NEK4P51957 841 aa6.85□□□□□ -1.31
USP8-218ENST00000561330 ADAM9Q13443 819 aa6.85□□□□□ -1.31
USP8-218ENST00000561330 ARHGAP44Q17R89 818 aa6.85□□□□□ -1.31
USP8-218ENST00000561330 CD276Q5ZPR3 534 aa6.85□□□□□ -1.31
USP8-218ENST00000561330 CNNM4Q6P4Q7 775 aa6.85□□□□□ -1.31
USP8-218ENST00000561330 LIPIQ6XZB0 460 aa6.85□□□□□ -1.31
USP8-218ENST00000561330 LCNL1Q6ZST4 164 aa6.85□□□□□ -1.31
USP8-218ENST00000561330 PROSER1Q86XN7 944 aa6.85□□□□□ -1.31
USP8-218ENST00000561330 NOSTRINQ8IVI9 506 aa6.85□□□□□ -1.31
USP8-218ENST00000561330 CHST14Q8NCH0 376 aa6.85□□□□□ -1.31
USP8-218ENST00000561330 WRNIP1Q96S55 665 aa6.85□□□□□ -1.31
USP8-218ENST00000561330 BOCQ9BWV1 1114 aa6.85□□□□□ -1.31
USP8-218ENST00000561330 SLKQ9H2G2 1235 aaPredicted RBP6.85□□□□□ -1.31
USP8-218ENST00000561330 SPATA6Q9NWH7 488 aaPredicted RBP6.85□□□□□ -1.31
USP8-218ENST00000561330 NTMQ9P121 344 aa6.85□□□□□ -1.31
USP8-218ENST00000561330 WASF3Q9UPY6 502 aa6.85□□□□□ -1.31
USP8-218ENST00000561330 A0A1B0GTL3 188 aa6.84□□□□□ -1.31
USP8-218ENST00000561330 SH3D21A4FU49 640 aa6.84□□□□□ -1.31
USP8-218ENST00000561330 PRAMEF25A6NGN4 478 aa6.84□□□□□ -1.31
USP8-218ENST00000561330 HIP1RO75146 1068 aa6.84□□□□□ -1.31
USP8-218ENST00000561330 CYP7B1O75881 506 aa6.84□□□□□ -1.31
USP8-218ENST00000561330 CLSTN1O94985 981 aa6.84□□□□□ -1.31
USP8-218ENST00000561330 ENO2P09104 434 aaPredicted RBP6.84□□□□□ -1.31
USP8-218ENST00000561330 GYS2P54840 703 aa6.84□□□□□ -1.31
USP8-218ENST00000561330 DLX2Q07687 328 aaPredicted RBP6.84□□□□□ -1.31
USP8-218ENST00000561330 DBPQ10586 325 aaPredicted RBP6.84□□□□□ -1.31
USP8-218ENST00000561330 CPZQ66K79 652 aa6.84□□□□□ -1.31
USP8-218ENST00000561330 PKN3Q6P5Z2 889 aa6.84□□□□□ -1.31
USP8-218ENST00000561330 ADGRG2Q8IZP9 1017 aa6.84□□□□□ -1.31
USP8-218ENST00000561330 DDX1Q92499 740 aaKnown RBP6.84□□□□□ -1.31
USP8-218ENST00000561330 ZSWIM3Q96MP5 696 aa6.84□□□□□ -1.31
USP8-218ENST00000561330 DLL4Q9NR61 685 aa6.84□□□□□ -1.31
USP8-218ENST00000561330 KCNH7Q9NS40 1196 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms