RNA–Protein interactions for RNA: ENST00000561321.1

SEMA4B-220, Transcript of semaphorin 4B, humanhuman

TSL 2

Gene SEMA4B, Length 563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-220ENST00000561321 GPNMBQ14956 572 aa14.07□□□□□ -0.16
SEMA4B-220ENST00000561321 PKN1Q16512 942 aa14.07□□□□□ -0.16
SEMA4B-220ENST00000561321 TRIM71Q2Q1W2 868 aaKnown RBP14.07□□□□□ -0.16
SEMA4B-220ENST00000561321 SERINC5Q86VE9 423 aa14.07□□□□□ -0.16
SEMA4B-220ENST00000561321 CCDC12Q8WUD4 166 aaPredicted RBP14.07□□□□□ -0.16
SEMA4B-220ENST00000561321 SEPT1Q8WYJ6 367 aa14.07□□□□□ -0.16
SEMA4B-220ENST00000561321 C6orf50Q9HD87 102 aa14.07□□□□□ -0.16
SEMA4B-220ENST00000561321 JPH1Q9HDC5 661 aaPredicted RBP14.07□□□□□ -0.16
SEMA4B-220ENST00000561321 KCNH7Q9NS40 1196 aa14.07□□□□□ -0.16
SEMA4B-220ENST00000561321 SETD4Q9NVD3 440 aa14.07□□□□□ -0.16
SEMA4B-220ENST00000561321 GSTTP1A0A1W2PQM5 241 aa14.06□□□□□ -0.16
SEMA4B-220ENST00000561321 ADAMTS3O15072 1205 aa14.06□□□□□ -0.16
SEMA4B-220ENST00000561321 MAFGO15525 162 aa14.06□□□□□ -0.16
SEMA4B-220ENST00000561321 CTSHP09668 335 aa14.06□□□□□ -0.16
SEMA4B-220ENST00000561321 ARP10275 920 aa14.06□□□□□ -0.16
SEMA4B-220ENST00000561321 SREBF1P36956 1147 aa14.06□□□□□ -0.16
SEMA4B-220ENST00000561321 NTRK3Q16288 839 aa14.06□□□□□ -0.16
SEMA4B-220ENST00000561321 CEP55Q53EZ4 464 aa14.06□□□□□ -0.16
SEMA4B-220ENST00000561321 MAFAQ8NHW3 353 aaPredicted RBP14.06□□□□□ -0.16
SEMA4B-220ENST00000561321 GLG1Q92896 1179 aa14.06□□□□□ -0.16
SEMA4B-220ENST00000561321 UIMC1Q96RL1 719 aa14.06□□□□□ -0.16
SEMA4B-220ENST00000561321 SLC9A7Q96T83 725 aa14.06□□□□□ -0.16
SEMA4B-220ENST00000561321 SDF4Q9BRK5 362 aa14.06□□□□□ -0.16
SEMA4B-220ENST00000561321 PRDM12Q9H4Q4 367 aa14.06□□□□□ -0.16
SEMA4B-220ENST00000561321 SLC28A3Q9HAS3 691 aa14.06□□□□□ -0.16
SEMA4B-220ENST00000561321 PDRG1Q9NUG6 133 aa14.06□□□□□ -0.16
SEMA4B-220ENST00000561321 SLC9A2Q9UBY0 812 aa14.06□□□□□ -0.16
SEMA4B-220ENST00000561321 UNC80Q8N2C7 3258 aa14.06□□□□□ -0.16
SEMA4B-220ENST00000561321 A0A0C4DFX4 3053 aa14.05□□□□□ -0.16
SEMA4B-220ENST00000561321 ESYT2A0FGR8 921 aa14.05□□□□□ -0.16
SEMA4B-220ENST00000561321 RSPH10B2B2RC85 870 aa14.05□□□□□ -0.16
SEMA4B-220ENST00000561321 DDX39AO00148 427 aaKnown RBP14.05□□□□□ -0.16
SEMA4B-220ENST00000561321 BAIAP3O94812 1187 aa14.05□□□□□ -0.16
SEMA4B-220ENST00000561321 PARNO95453 639 aaKnown RBP14.05□□□□□ -0.16
SEMA4B-220ENST00000561321 RSPH10BP0C881 870 aa14.05□□□□□ -0.16
SEMA4B-220ENST00000561321 GNAT1P11488 350 aa14.05□□□□□ -0.16
SEMA4B-220ENST00000561321 IFNAR1P17181 557 aa14.05□□□□□ -0.16
SEMA4B-220ENST00000561321 HOXC8P31273 242 aa14.05□□□□□ -0.16
SEMA4B-220ENST00000561321 KCNJ6P48051 423 aa14.05□□□□□ -0.16
SEMA4B-220ENST00000561321 EVCP57679 992 aa14.05□□□□□ -0.16
SEMA4B-220ENST00000561321 ITGB3BPQ13352 177 aaPredicted RBP14.05□□□□□ -0.16
SEMA4B-220ENST00000561321 MBTPS1Q14703 1052 aa14.05□□□□□ -0.16
SEMA4B-220ENST00000561321 TCTN1Q2MV58 587 aa14.05□□□□□ -0.16
SEMA4B-220ENST00000561321 PPP2R2DQ66LE6 453 aa14.05□□□□□ -0.16
SEMA4B-220ENST00000561321 CNKSR3Q6P9H4 555 aa14.05□□□□□ -0.16
SEMA4B-220ENST00000561321 TRAF7Q6Q0C0 670 aa14.05□□□□□ -0.16
SEMA4B-220ENST00000561321 TEX2Q8IWB9 1127 aa14.05□□□□□ -0.16
SEMA4B-220ENST00000561321 REXO1Q8N1G1 1221 aaKnown RBP14.05□□□□□ -0.16
SEMA4B-220ENST00000561321 RASGRP4Q8TDF6 673 aa14.05□□□□□ -0.16
SEMA4B-220ENST00000561321 LMBR1Q8WVP7 490 aa14.05□□□□□ -0.16
SEMA4B-220ENST00000561321 RNF26Q9BY78 433 aaPredicted RBP14.05□□□□□ -0.16
SEMA4B-220ENST00000561321 TM6SF1Q9BZW5 370 aa14.05□□□□□ -0.16
SEMA4B-220ENST00000561321 ZMYND12Q9H0C1 365 aa14.05□□□□□ -0.16
SEMA4B-220ENST00000561321 AGO4Q9HCK5 861 aaKnown RBP14.05□□□□□ -0.16
SEMA4B-220ENST00000561321 VPS54Q9P1Q0 977 aa14.05□□□□□ -0.16
SEMA4B-220ENST00000561321 PCDHA11Q9Y5I1 949 aa14.05□□□□□ -0.16
SEMA4B-220ENST00000561321 PRUNE2Q8WUY3 3088 aa14.04□□□□□ -0.16
SEMA4B-220ENST00000561321 CPLX1O14810 134 aa14.04□□□□□ -0.16
SEMA4B-220ENST00000561321 CXCL10P02778 98 aa14.04□□□□□ -0.16
SEMA4B-220ENST00000561321 GNA11P29992 359 aa14.04□□□□□ -0.16
SEMA4B-220ENST00000561321 ACTR2P61160 394 aa14.04□□□□□ -0.16
SEMA4B-220ENST00000561321 WDR5P61964 334 aaKnown RBP14.04□□□□□ -0.16
SEMA4B-220ENST00000561321 SSRP1Q08945 709 aaKnown RBP14.04□□□□□ -0.16
SEMA4B-220ENST00000561321 PPFIA1Q13136 1202 aa14.04□□□□□ -0.16
SEMA4B-220ENST00000561321 TMCO2Q7Z6W1 182 aaPredicted RBP14.04□□□□□ -0.16
SEMA4B-220ENST00000561321 TRIM22Q8IYM9 498 aa14.04□□□□□ -0.16
SEMA4B-220ENST00000561321 CCDC148Q8NFR7 591 aa14.04□□□□□ -0.16
SEMA4B-220ENST00000561321 GAS2L1Q99501 681 aaPredicted RBP14.04□□□□□ -0.16
SEMA4B-220ENST00000561321 SMARCAD1Q9H4L7 1026 aa14.04□□□□□ -0.16
SEMA4B-220ENST00000561321 ERAP1Q9NZ08 941 aa14.04□□□□□ -0.16
SEMA4B-220ENST00000561321 CHD7Q9P2D1 2997 aa14.04□□□□□ -0.16
SEMA4B-220ENST00000561321 PTPRSQ13332 1948 aa14.03□□□□□ -0.16
SEMA4B-220ENST00000561321 FAM86B1E9PN63 330 aa14.03□□□□□ -0.16
SEMA4B-220ENST00000561321 MEIS1O00470 390 aa14.03□□□□□ -0.16
SEMA4B-220ENST00000561321 LGR5O75473 907 aa14.03□□□□□ -0.16
SEMA4B-220ENST00000561321 CA3P07451 260 aa14.03□□□□□ -0.16
SEMA4B-220ENST00000561321 FAM86B2P0C5J1 330 aa14.03□□□□□ -0.16
SEMA4B-220ENST00000561321 IGBP1P78318 339 aa14.03□□□□□ -0.16
SEMA4B-220ENST00000561321 DEFB103AP81534 67 aa14.03□□□□□ -0.16
SEMA4B-220ENST00000561321 GRIK4Q16099 956 aa14.03□□□□□ -0.16
SEMA4B-220ENST00000561321 RUFY4Q6ZNE9 571 aa14.03□□□□□ -0.16
SEMA4B-220ENST00000561321 PLA2G4DQ86XP0 818 aa14.03□□□□□ -0.16
SEMA4B-220ENST00000561321 HERC6Q8IVU3 1022 aa14.03□□□□□ -0.16
SEMA4B-220ENST00000561321 PHOSPHO2Q8TCD6 241 aa14.03□□□□□ -0.16
SEMA4B-220ENST00000561321 BICD2Q8TD16 824 aa14.03□□□□□ -0.16
SEMA4B-220ENST00000561321 ZNF274Q96GC6 653 aaPredicted RBP14.03□□□□□ -0.16
SEMA4B-220ENST00000561321 AZI2Q9H6S1 392 aa14.03□□□□□ -0.16
SEMA4B-220ENST00000561321 NFASCO94856 1347 aa14.03□□□□□ -0.16
SEMA4B-220ENST00000561321 NRCAMQ92823 1304 aa14.03□□□□□ -0.16
SEMA4B-220ENST00000561321 EMSYQ7Z589 1322 aa14.02□□□□□ -0.17
SEMA4B-220ENST00000561321 TLL1O43897 1013 aa14.02□□□□□ -0.17
SEMA4B-220ENST00000561321 CYP3A4P08684 503 aa14.02□□□□□ -0.17
SEMA4B-220ENST00000561321 IGFBP4P22692 258 aa14.02□□□□□ -0.17
SEMA4B-220ENST00000561321 NLRP5P59047 1200 aa14.02□□□□□ -0.17
SEMA4B-220ENST00000561321 IKBKEQ14164 716 aa14.02□□□□□ -0.17
SEMA4B-220ENST00000561321 NIPA1Q7RTP0 329 aa14.02□□□□□ -0.17
SEMA4B-220ENST00000561321 PPM1EQ8WY54 764 aa14.02□□□□□ -0.17
SEMA4B-220ENST00000561321 PCYT2Q99447 389 aa14.02□□□□□ -0.17
SEMA4B-220ENST00000561321 ZBED2Q9BTP6 218 aa14.02□□□□□ -0.17
SEMA4B-220ENST00000561321 CERS4Q9HA82 394 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms