RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 PIK3AP1Q6ZUJ8 805 aa17.6■□□□□ 0.41
RABGGTA-219ENST00000560871 JPH1Q9HDC5 661 aaPredicted RBP17.6■□□□□ 0.41
RABGGTA-219ENST00000560871 GSTTP1A0A1W2PQM5 241 aa17.59■□□□□ 0.41
RABGGTA-219ENST00000560871 IPO5O00410 1097 aaKnown RBP17.59■□□□□ 0.41
RABGGTA-219ENST00000560871 SP4Q02446 784 aa17.59■□□□□ 0.41
RABGGTA-219ENST00000560871 NBPF20Q3BBV1 942 aa17.59■□□□□ 0.41
RABGGTA-219ENST00000560871 NFRKBQ6P4R8 1299 aa17.59■□□□□ 0.41
RABGGTA-219ENST00000560871 NEK8Q86SG6 692 aa17.59■□□□□ 0.41
RABGGTA-219ENST00000560871 SESTD1Q86VW0 696 aa17.59■□□□□ 0.41
RABGGTA-219ENST00000560871 DEFB123Q8N688 67 aa17.59■□□□□ 0.41
RABGGTA-219ENST00000560871 KATNAL1Q9BW62 490 aa17.59■□□□□ 0.41
RABGGTA-219ENST00000560871 SLC9A2Q9UBY0 812 aa17.59■□□□□ 0.41
RABGGTA-219ENST00000560871 SZT2Q5T011 3432 aa17.58■□□□□ 0.41
RABGGTA-219ENST00000560871 MSH4O15457 936 aa17.58■□□□□ 0.4
RABGGTA-219ENST00000560871 B4GALT4O60513 344 aa17.58■□□□□ 0.4
RABGGTA-219ENST00000560871 GJB2P29033 226 aa17.58■□□□□ 0.4
RABGGTA-219ENST00000560871 TCF7P36402 384 aaPredicted RBP17.58■□□□□ 0.4
RABGGTA-219ENST00000560871 PSEN2P49810 448 aa17.58■□□□□ 0.4
RABGGTA-219ENST00000560871 PTPN11Q06124 597 aaPredicted RBP17.58■□□□□ 0.4
RABGGTA-219ENST00000560871 PPIGQ13427 754 aaKnown RBP eCLIP17.58■□□□□ 0.42e-7■■■□□ 16.1
RABGGTA-219ENST00000560871 FAM109BQ6ICB4 259 aaPredicted RBP17.58■□□□□ 0.4
RABGGTA-219ENST00000560871 Q7L0L9 218 aa17.58■□□□□ 0.4
RABGGTA-219ENST00000560871 TRIM50Q86XT4 487 aa17.58■□□□□ 0.4
RABGGTA-219ENST00000560871 PPP1R13LQ8WUF5 828 aa17.58■□□□□ 0.4
RABGGTA-219ENST00000560871 SEPT1Q8WYJ6 367 aa17.58■□□□□ 0.4
RABGGTA-219ENST00000560871 SNX21Q969T3 373 aa17.58■□□□□ 0.4
RABGGTA-219ENST00000560871 SDF4Q9BRK5 362 aa17.58■□□□□ 0.4
RABGGTA-219ENST00000560871 ZNF577Q9BSK1 485 aa17.58■□□□□ 0.4
RABGGTA-219ENST00000560871 PPP1R12CQ9BZL4 782 aa17.58■□□□□ 0.4
RABGGTA-219ENST00000560871 TRPV6Q9H1D0 765 aa17.58■□□□□ 0.4
RABGGTA-219ENST00000560871 EMSYQ7Z589 1322 aa17.57■□□□□ 0.4
RABGGTA-219ENST00000560871 K7ELQ4 463 aaPredicted RBP17.57■□□□□ 0.4
RABGGTA-219ENST00000560871 SLC37A4O43826 429 aa17.57■□□□□ 0.4
RABGGTA-219ENST00000560871 CCNE2O96020 404 aa17.57■□□□□ 0.4
RABGGTA-219ENST00000560871 CYP2C18P33260 490 aa17.57■□□□□ 0.4
RABGGTA-219ENST00000560871 ACTR2P61160 394 aa17.57■□□□□ 0.4
RABGGTA-219ENST00000560871 MFSD10Q14728 455 aa17.57■□□□□ 0.4
RABGGTA-219ENST00000560871 LETM2Q2VYF4 491 aa17.57■□□□□ 0.4
RABGGTA-219ENST00000560871 PPP4R3AQ6IN85 833 aa17.57■□□□□ 0.4
RABGGTA-219ENST00000560871 C16orf59Q7L2K0 433 aa17.57■□□□□ 0.4
RABGGTA-219ENST00000560871 TMEM199Q8N511 208 aa17.57■□□□□ 0.4
RABGGTA-219ENST00000560871 ETNPPLQ8TBG4 499 aa17.57■□□□□ 0.4
RABGGTA-219ENST00000560871 MTMR10Q9NXD2 777 aa17.57■□□□□ 0.4
RABGGTA-219ENST00000560871 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.57■□□□□ 0.4
RABGGTA-219ENST00000560871 KIF28PB7ZC32 967 aa17.56■□□□□ 0.4
RABGGTA-219ENST00000560871 H3BRB1 525 aa17.56■□□□□ 0.4
RABGGTA-219ENST00000560871 WNT7AO00755 349 aa17.56■□□□□ 0.4
RABGGTA-219ENST00000560871 LGR5O75473 907 aa17.56■□□□□ 0.4
RABGGTA-219ENST00000560871 ATG7O95352 703 aa17.56■□□□□ 0.4
RABGGTA-219ENST00000560871 CSF2RAP15509 400 aa17.56■□□□□ 0.4
RABGGTA-219ENST00000560871 GCFC2P16383 781 aaKnown RBP17.56■□□□□ 0.4
RABGGTA-219ENST00000560871 SAFBQ15424 915 aaKnown RBP eCLIP17.56■□□□□ 0.4
RABGGTA-219ENST00000560871 KIAA0753Q2KHM9 967 aa17.56■□□□□ 0.4
RABGGTA-219ENST00000560871 SLC5A5Q92911 643 aa17.56■□□□□ 0.4
RABGGTA-219ENST00000560871 RNPC3Q96LT9 517 aaKnown RBP17.56■□□□□ 0.4
RABGGTA-219ENST00000560871 UIMC1Q96RL1 719 aa17.56■□□□□ 0.4
RABGGTA-219ENST00000560871 PCYT2Q99447 389 aa17.56■□□□□ 0.4
RABGGTA-219ENST00000560871 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.56■□□□□ 0.41e-7■□□□□ 11.1
RABGGTA-219ENST00000560871 NOC4LQ9BVI4 516 aaKnown RBP17.56■□□□□ 0.4
RABGGTA-219ENST00000560871 FOXP1Q9H334 677 aaPredicted RBP17.56■□□□□ 0.4
RABGGTA-219ENST00000560871 HIPK3Q9H422 1215 aa17.56■□□□□ 0.4
RABGGTA-219ENST00000560871 TUT1Q9H6E5 874 aaKnown RBP17.56■□□□□ 0.4
RABGGTA-219ENST00000560871 TBC1D22BQ9NU19 505 aa17.56■□□□□ 0.4
RABGGTA-219ENST00000560871 GTF2IRD1Q9UHL9 959 aa17.56■□□□□ 0.4
RABGGTA-219ENST00000560871 SMC3Q9UQE7 1217 aa17.56■□□□□ 0.4
RABGGTA-219ENST00000560871 KIF3AQ9Y496 699 aa17.56■□□□□ 0.4
RABGGTA-219ENST00000560871 UMODL1Q5DID0 1318 aa17.55■□□□□ 0.4
RABGGTA-219ENST00000560871 DDX39AO00148 427 aaKnown RBP17.55■□□□□ 0.4
RABGGTA-219ENST00000560871 SUPT20HL2P0C7V6 817 aa17.55■□□□□ 0.4
RABGGTA-219ENST00000560871 HOXC8P31273 242 aa17.55■□□□□ 0.4
RABGGTA-219ENST00000560871 SMAD3P84022 425 aaKnown RBP17.55■□□□□ 0.4
RABGGTA-219ENST00000560871 FAM47CQ5HY64 1035 aa17.55■□□□□ 0.4
RABGGTA-219ENST00000560871 TMEM240Q5SV17 173 aa17.55■□□□□ 0.4
RABGGTA-219ENST00000560871 UTP14CQ5TAP6 766 aaKnown RBP17.55■□□□□ 0.4
RABGGTA-219ENST00000560871 B3GNT9Q6UX72 402 aa17.55■□□□□ 0.4
RABGGTA-219ENST00000560871 KCNMB3Q9NPA1 279 aa17.55■□□□□ 0.4
RABGGTA-219ENST00000560871 TRMT13Q9NUP7 481 aaKnown RBP17.55■□□□□ 0.4
RABGGTA-219ENST00000560871 DDX25Q9UHL0 483 aaKnown RBP17.55■□□□□ 0.4
RABGGTA-219ENST00000560871 IGKV6D-21A0A0A0MT36 114 aa17.54■□□□□ 0.4
RABGGTA-219ENST00000560871 CCNT1O60563 726 aaKnown RBP17.54■□□□□ 0.4
RABGGTA-219ENST00000560871 PSMD10O75832 226 aa17.54■□□□□ 0.4
RABGGTA-219ENST00000560871 HIC1Q14526 733 aa17.54■□□□□ 0.4
RABGGTA-219ENST00000560871 GDF6Q6KF10 455 aaPredicted RBP17.54■□□□□ 0.4
RABGGTA-219ENST00000560871 ZNF746Q6NUN9 644 aaPredicted RBP17.54■□□□□ 0.4
RABGGTA-219ENST00000560871 ABHD15Q6UXT9 468 aa17.54■□□□□ 0.4
RABGGTA-219ENST00000560871 POTEDQ86YR6 584 aa17.54■□□□□ 0.4
RABGGTA-219ENST00000560871 GJA10Q969M2 543 aa17.54■□□□□ 0.4
RABGGTA-219ENST00000560871 CTAGE1Q96RT6 745 aa17.54■□□□□ 0.4
RABGGTA-219ENST00000560871 RIT2Q99578 217 aa17.54■□□□□ 0.4
RABGGTA-219ENST00000560871 NAP1L4Q99733 375 aaKnown RBP17.54■□□□□ 0.4
RABGGTA-219ENST00000560871 IL23AQ9NPF7 189 aa17.54■□□□□ 0.4
RABGGTA-219ENST00000560871 HDAC6Q9UBN7 1215 aa17.54■□□□□ 0.4
RABGGTA-219ENST00000560871 ZNF215Q9UL58 517 aaPredicted RBP17.54■□□□□ 0.4
RABGGTA-219ENST00000560871 U2AF2P26368 475 aaKnown RBP eCLIP17.53■□□□□ 0.43e-6■■■■□ 20.1
RABGGTA-219ENST00000560871 KRT76Q01546 638 aa17.53■□□□□ 0.4
RABGGTA-219ENST00000560871 RASIP1Q5U651 963 aa17.53■□□□□ 0.4
RABGGTA-219ENST00000560871 LRCH2Q5VUJ6 765 aa17.53■□□□□ 0.4
RABGGTA-219ENST00000560871 ZNF365Q70YC5 407 aa17.53■□□□□ 0.4
RABGGTA-219ENST00000560871 NOSTRINQ8IVI9 506 aa17.53■□□□□ 0.4
RABGGTA-219ENST00000560871 CCDC60Q8IWA6 550 aaPredicted RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms