RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 BRD1O95696 1058 aa24.48■■□□□ 1.51
SNX1-206ENST00000559389 F2P00734 622 aa24.48■■□□□ 1.51
SNX1-206ENST00000559389 LGALS2P05162 132 aa24.48■■□□□ 1.51
SNX1-206ENST00000559389 ZNF286BP0CG31 522 aa24.48■■□□□ 1.51
SNX1-206ENST00000559389 TCF7P36402 384 aaPredicted RBP24.48■■□□□ 1.51
SNX1-206ENST00000559389 FAM173BQ6P4H8 233 aa24.48■■□□□ 1.51
SNX1-206ENST00000559389 EMSYQ7Z589 1322 aa24.48■■□□□ 1.51
SNX1-206ENST00000559389 NECAB2Q7Z6G3 386 aa24.48■■□□□ 1.51
SNX1-206ENST00000559389 SMAP1Q8IYB5 467 aaPredicted RBP24.48■■□□□ 1.51
SNX1-206ENST00000559389 MTG1Q9BT17 334 aaPredicted RBP24.48■■□□□ 1.51
SNX1-206ENST00000559389 UNC45AQ9H3U1 944 aa24.48■■□□□ 1.51
SNX1-206ENST00000559389 SCN10AQ9Y5Y9 1956 aa24.48■■□□□ 1.51
SNX1-206ENST00000559389 ATG7O95352 703 aa24.47■■□□□ 1.51
SNX1-206ENST00000559389 SPIRE1Q08AE8 756 aa24.47■■□□□ 1.51
SNX1-206ENST00000559389 PPP2R5CQ13362 524 aa24.47■■□□□ 1.51
SNX1-206ENST00000559389 FOXD4L5Q5VV16 416 aaPredicted RBP24.47■■□□□ 1.51
SNX1-206ENST00000559389 C4orf32Q8N8J7 132 aa24.47■■□□□ 1.51
SNX1-206ENST00000559389 FOXD4L4Q8WXT5 416 aaPredicted RBP24.47■■□□□ 1.51
SNX1-206ENST00000559389 FERMT2Q96AC1 680 aa24.47■■□□□ 1.51
SNX1-206ENST00000559389 GLT1D1Q96MS3 346 aa24.47■■□□□ 1.51
SNX1-206ENST00000559389 C16orf70Q9BSU1 422 aa24.47■■□□□ 1.51
SNX1-206ENST00000559389 ZDHHC9Q9Y397 364 aa24.47■■□□□ 1.51
SNX1-206ENST00000559389 WDR64B1ANS9 1081 aa24.46■■□□□ 1.51
SNX1-206ENST00000559389 MARCH6O60337 910 aa24.46■■□□□ 1.51
SNX1-206ENST00000559389 LGR5O75473 907 aa24.46■■□□□ 1.51
SNX1-206ENST00000559389 SUPT20HL2P0C7V6 817 aa24.46■■□□□ 1.51
SNX1-206ENST00000559389 JAK3P52333 1124 aa24.46■■□□□ 1.51
SNX1-206ENST00000559389 TRIM50Q86XT4 487 aa24.46■■□□□ 1.51
SNX1-206ENST00000559389 KAT2BQ92831 832 aa24.46■■□□□ 1.51
SNX1-206ENST00000559389 STARD7Q9NQZ5 370 aa24.46■■□□□ 1.51
SNX1-206ENST00000559389 DAXXQ9UER7 740 aaPredicted RBP24.46■■□□□ 1.51
SNX1-206ENST00000559389 BRCA2P51587 3418 aa24.45■■□□□ 1.51
SNX1-206ENST00000559389 IGKV6D-21A0A0A0MT36 114 aa24.45■■□□□ 1.5
SNX1-206ENST00000559389 LAD1O00515 517 aa24.45■■□□□ 1.5
SNX1-206ENST00000559389 CHMP2AO43633 222 aa24.45■■□□□ 1.5
SNX1-206ENST00000559389 SFNP31947 248 aa24.45■■□□□ 1.5
SNX1-206ENST00000559389 ATP2C1P98194 919 aaPredicted RBP24.45■■□□□ 1.5
SNX1-206ENST00000559389 PTGDRQ13258 359 aa24.45■■□□□ 1.5
SNX1-206ENST00000559389 ABHD15Q6UXT9 468 aa24.45■■□□□ 1.5
SNX1-206ENST00000559389 RDM1Q8NG50 284 aa24.45■■□□□ 1.5
SNX1-206ENST00000559389 PCYT2Q99447 389 aa24.45■■□□□ 1.5
SNX1-206ENST00000559389 FTOQ9C0B1 505 aaKnown RBP eCLIP24.45■■□□□ 1.5
SNX1-206ENST00000559389 SENP6Q9GZR1 1112 aaPredicted RBP24.45■■□□□ 1.5
SNX1-206ENST00000559389 TTC12Q9H892 705 aaPredicted RBP24.45■■□□□ 1.5
SNX1-206ENST00000559389 HAS3O00219 553 aa24.44■■□□□ 1.5
SNX1-206ENST00000559389 UTP14CQ5TAP6 766 aaKnown RBP24.44■■□□□ 1.5
SNX1-206ENST00000559389 MIS18BP1Q6P0N0 1132 aa24.44■■□□□ 1.5
SNX1-206ENST00000559389 KATNAL1Q9BW62 490 aa24.44■■□□□ 1.5
SNX1-206ENST00000559389 IGSF9BQ9UPX0 1349 aa24.43■■□□□ 1.5
SNX1-206ENST00000559389 BMP15O95972 392 aa24.43■■□□□ 1.5
SNX1-206ENST00000559389 PRPHP41219 470 aa24.43■■□□□ 1.5
SNX1-206ENST00000559389 TXKP42681 527 aa24.43■■□□□ 1.5
SNX1-206ENST00000559389 PSMC6P62333 389 aa24.43■■□□□ 1.5
SNX1-206ENST00000559389 SNX17Q15036 470 aa24.43■■□□□ 1.5
SNX1-206ENST00000559389 CCDC60Q8IWA6 550 aaPredicted RBP24.43■■□□□ 1.5
SNX1-206ENST00000559389 DISC1Q9NRI5 854 aa24.43■■□□□ 1.5
SNX1-206ENST00000559389 ZNF215Q9UL58 517 aaPredicted RBP24.43■■□□□ 1.5
SNX1-206ENST00000559389 PCDHA12Q9UN75 941 aa24.43■■□□□ 1.5
SNX1-206ENST00000559389 PCDHA10Q9Y5I2 948 aa24.43■■□□□ 1.5
SNX1-206ENST00000559389 GRIN2DO15399 1336 aa24.42■■□□□ 1.5
SNX1-206ENST00000559389 A0A0U1RQG5 324 aaPredicted RBP24.42■■□□□ 1.5
SNX1-206ENST00000559389 EML1O00423 815 aa24.42■■□□□ 1.5
SNX1-206ENST00000559389 PSAPP07602 524 aa24.42■■□□□ 1.5
SNX1-206ENST00000559389 PSEN2P49810 448 aa24.42■■□□□ 1.5
SNX1-206ENST00000559389 MFSD10Q14728 455 aa24.42■■□□□ 1.5
SNX1-206ENST00000559389 SF3A1Q15459 793 aaKnown RBP24.42■■□□□ 1.5
SNX1-206ENST00000559389 MIER3Q7Z3K6 550 aa24.42■■□□□ 1.5
SNX1-206ENST00000559389 AFAP1L1Q8TED9 768 aa24.42■■□□□ 1.5
SNX1-206ENST00000559389 USP28Q96RU2 1077 aa24.42■■□□□ 1.5
SNX1-206ENST00000559389 SMARCAD1Q9H4L7 1026 aa24.42■■□□□ 1.5
SNX1-206ENST00000559389 SAMM50Q9Y512 469 aa24.42■■□□□ 1.5
SNX1-206ENST00000559389 ALPK3Q96L96 1907 aa24.41■■□□□ 1.5
SNX1-206ENST00000559389 H3BRB1 525 aa24.41■■□□□ 1.5
SNX1-206ENST00000559389 FXR2P51116 673 aaKnown RBP eCLIP24.41■■□□□ 1.5
SNX1-206ENST00000559389 ITGA7Q13683 1181 aa24.41■■□□□ 1.5
SNX1-206ENST00000559389 PTPAQ15257 358 aa24.41■■□□□ 1.5
SNX1-206ENST00000559389 NCAPH2Q6IBW4 605 aa24.41■■□□□ 1.5
SNX1-206ENST00000559389 SLC39A5Q6ZMH5 540 aa24.41■■□□□ 1.5
SNX1-206ENST00000559389 SLC43A3Q8NBI5 491 aa24.41■■□□□ 1.5
SNX1-206ENST00000559389 TUT1Q9H6E5 874 aaKnown RBP24.41■■□□□ 1.5
SNX1-206ENST00000559389 AZI2Q9H6S1 392 aa24.41■■□□□ 1.5
SNX1-206ENST00000559389 CEP131Q9UPN4 1083 aa24.41■■□□□ 1.5
SNX1-206ENST00000559389 CLIC4Q9Y696 253 aa24.41■■□□□ 1.5
SNX1-206ENST00000559389 WDR81Q562E7 1941 aa24.41■■□□□ 1.5
SNX1-206ENST00000559389 POTEMA6NI47 508 aa24.4■■□□□ 1.5
SNX1-206ENST00000559389 BACH1O14867 736 aa24.4■■□□□ 1.5
SNX1-206ENST00000559389 CAPN15O75808 1086 aa24.4■■□□□ 1.5
SNX1-206ENST00000559389 NUCB2P80303 420 aa24.4■■□□□ 1.5
SNX1-206ENST00000559389 KIAA0753Q2KHM9 967 aa24.4■■□□□ 1.5
SNX1-206ENST00000559389 TMEM266Q2M3C6 531 aa24.4■■□□□ 1.5
SNX1-206ENST00000559389 C1orf53Q5VUE5 145 aa24.4■■□□□ 1.5
SNX1-206ENST00000559389 FAM160B1Q5W0V3 765 aa24.4■■□□□ 1.5
SNX1-206ENST00000559389 ARL6IP4Q66PJ3 421 aaKnown RBP24.4■■□□□ 1.5
SNX1-206ENST00000559389 PLPPR4Q7Z2D5 763 aa24.4■■□□□ 1.5
SNX1-206ENST00000559389 GLG1Q92896 1179 aa24.4■■□□□ 1.5
SNX1-206ENST00000559389 ZNF396Q96N95 335 aaPredicted RBP24.4■■□□□ 1.5
SNX1-206ENST00000559389 ZNF302Q9NR11 478 aa24.4■■□□□ 1.5
SNX1-206ENST00000559389 ERAP1Q9NZ08 941 aa24.4■■□□□ 1.5
SNX1-206ENST00000559389 NASPP49321 788 aaPredicted RBP24.39■■□□□ 1.49
SNX1-206ENST00000559389 STAT5BP51692 787 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms