RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 TCRBV5S2A0A599 114 aa7.07□□□□□ -1.28
SYNE2-210ENST00000553455 ZC3H12DA2A288 527 aaKnown RBP7.07□□□□□ -1.28
SYNE2-210ENST00000553455 FAM90A27PA6NNH2 459 aa7.07□□□□□ -1.28
SYNE2-210ENST00000553455 GABRDO14764 452 aa7.07□□□□□ -1.28
SYNE2-210ENST00000553455 MARCH6O60337 910 aa7.07□□□□□ -1.28
SYNE2-210ENST00000553455 ALDH1L1O75891 902 aa7.07□□□□□ -1.28
SYNE2-210ENST00000553455 CYBBP04839 570 aa7.07□□□□□ -1.28
SYNE2-210ENST00000553455 SDHBP21912 280 aa7.07□□□□□ -1.28
SYNE2-210ENST00000553455 ARL4AP40617 200 aa7.07□□□□□ -1.28
SYNE2-210ENST00000553455 ERVK-21P61565 698 aa7.07□□□□□ -1.28
SYNE2-210ENST00000553455 SMAD3P84022 425 aaKnown RBP7.07□□□□□ -1.28
SYNE2-210ENST00000553455 ITKQ08881 620 aa7.07□□□□□ -1.28
SYNE2-210ENST00000553455 TUSC3Q13454 348 aa7.07□□□□□ -1.28
SYNE2-210ENST00000553455 SMAD2Q15796 467 aaKnown RBP7.07□□□□□ -1.28
SYNE2-210ENST00000553455 FYB2Q5VWT5 728 aa7.07□□□□□ -1.28
SYNE2-210ENST00000553455 NLGN4XQ8N0W4 816 aa7.07□□□□□ -1.28
SYNE2-210ENST00000553455 PHOSPHO1Q8TCT1 267 aa7.07□□□□□ -1.28
SYNE2-210ENST00000553455 CLEC4DQ8WXI8 215 aa7.07□□□□□ -1.28
SYNE2-210ENST00000553455 AP5M1Q9H0R1 490 aa7.07□□□□□ -1.28
SYNE2-210ENST00000553455 PCDHB4Q9Y5E5 795 aa7.07□□□□□ -1.28
SYNE2-210ENST00000553455 MAFKO60675 156 aa7.06□□□□□ -1.28
SYNE2-210ENST00000553455 HIP1RO75146 1068 aa7.06□□□□□ -1.28
SYNE2-210ENST00000553455 ULK1O75385 1050 aa7.06□□□□□ -1.28
SYNE2-210ENST00000553455 PTPN1P18031 435 aaKnown RBP7.06□□□□□ -1.28
SYNE2-210ENST00000553455 KIF11P52732 1056 aa7.06□□□□□ -1.28
SYNE2-210ENST00000553455 PHC1P78364 1004 aa7.06□□□□□ -1.28
SYNE2-210ENST00000553455 TTF1Q15361 905 aaPredicted RBP7.06□□□□□ -1.28
SYNE2-210ENST00000553455 TERF2Q15554 542 aa7.06□□□□□ -1.28
SYNE2-210ENST00000553455 ZNF174Q15697 407 aa7.06□□□□□ -1.28
SYNE2-210ENST00000553455 DDB1Q16531 1140 aa7.06□□□□□ -1.28
SYNE2-210ENST00000553455 SYDE2Q5VT97 1194 aa7.06□□□□□ -1.28
SYNE2-210ENST00000553455 BROXQ5VW32 411 aa7.06□□□□□ -1.28
SYNE2-210ENST00000553455 IQSEC1Q6DN90 963 aa7.06□□□□□ -1.28
SYNE2-210ENST00000553455 ESRP1Q6NXG1 681 aaKnown RBP7.06□□□□□ -1.28
SYNE2-210ENST00000553455 PAQR3Q6TCH7 311 aa7.06□□□□□ -1.28
SYNE2-210ENST00000553455 HDGFL2Q7Z4V5 671 aaPredicted RBP7.06□□□□□ -1.28
SYNE2-210ENST00000553455 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.06□□□□□ -1.28
SYNE2-210ENST00000553455 CBARPQ8N350 705 aaPredicted RBP7.06□□□□□ -1.28
SYNE2-210ENST00000553455 SMAD5Q99717 465 aaKnown RBP7.06□□□□□ -1.28
SYNE2-210ENST00000553455 MS4A5Q9H3V2 200 aa7.06□□□□□ -1.28
SYNE2-210ENST00000553455 ZMAT4Q9H898 229 aa7.06□□□□□ -1.28
SYNE2-210ENST00000553455 KCNH7Q9NS40 1196 aa7.06□□□□□ -1.28
SYNE2-210ENST00000553455 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.05□□□□□ -1.28
SYNE2-210ENST00000553455 BUB1BO60566 1050 aaPredicted RBP7.05□□□□□ -1.28
SYNE2-210ENST00000553455 C4BPAP04003 597 aaKnown RBP7.05□□□□□ -1.28
SYNE2-210ENST00000553455 PTX3P26022 381 aaPredicted RBP7.05□□□□□ -1.28
SYNE2-210ENST00000553455 AFMP43652 599 aa7.05□□□□□ -1.28
SYNE2-210ENST00000553455 SESN3P58005 492 aa7.05□□□□□ -1.28
SYNE2-210ENST00000553455 MCL1Q07820 350 aa7.05□□□□□ -1.28
SYNE2-210ENST00000553455 CC2D1AQ6P1N0 951 aaPredicted RBP7.05□□□□□ -1.28
SYNE2-210ENST00000553455 RPTNQ6XPR3 784 aa7.05□□□□□ -1.28
SYNE2-210ENST00000553455 CBLL1Q75N03 491 aa7.05□□□□□ -1.28
SYNE2-210ENST00000553455 MILR1Q7Z6M3 343 aa7.05□□□□□ -1.28
SYNE2-210ENST00000553455 ARRDC4Q8NCT1 418 aa7.05□□□□□ -1.28
SYNE2-210ENST00000553455 PEX11GQ96HA9 241 aa7.05□□□□□ -1.28
SYNE2-210ENST00000553455 INTS4Q96HW7 963 aaKnown RBP7.05□□□□□ -1.28
SYNE2-210ENST00000553455 MENTQ9BUN1 341 aa7.05□□□□□ -1.28
SYNE2-210ENST00000553455 PCIF1Q9H4Z3 704 aa7.05□□□□□ -1.28
SYNE2-210ENST00000553455 NUDT5Q9UKK9 219 aa7.05□□□□□ -1.28
SYNE2-210ENST00000553455 NUB1Q9Y5A7 615 aa7.05□□□□□ -1.28
SYNE2-210ENST00000553455 HCFC2Q9Y5Z7 792 aa7.05□□□□□ -1.28
SYNE2-210ENST00000553455 RASSF10A6NK89 507 aa7.04□□□□□ -1.28
SYNE2-210ENST00000553455 NUDT19A8MXV4 375 aa7.04□□□□□ -1.28
SYNE2-210ENST00000553455 F8W031 263 aaPredicted RBP7.04□□□□□ -1.28
SYNE2-210ENST00000553455 ACOT7O00154 380 aa7.04□□□□□ -1.28
SYNE2-210ENST00000553455 GJA4P35212 333 aa7.04□□□□□ -1.28
SYNE2-210ENST00000553455 NEK2P51955 445 aa7.04□□□□□ -1.28
SYNE2-210ENST00000553455 GP2P55259 537 aaKnown RBP7.04□□□□□ -1.28
SYNE2-210ENST00000553455 INAVAQ3KP66 663 aa7.04□□□□□ -1.28
SYNE2-210ENST00000553455 CATSPEREQ5SY80 951 aa7.04□□□□□ -1.28
SYNE2-210ENST00000553455 GPR158Q5T848 1215 aa7.04□□□□□ -1.28
SYNE2-210ENST00000553455 EP400NLQ6ZTU2 488 aa7.04□□□□□ -1.28
SYNE2-210ENST00000553455 TTLL11Q8NHH1 800 aa7.04□□□□□ -1.28
SYNE2-210ENST00000553455 KIRREL1Q96J84 757 aa7.04□□□□□ -1.28
SYNE2-210ENST00000553455 SCYL1Q96KG9 808 aa7.04□□□□□ -1.28
SYNE2-210ENST00000553455 ACSS2Q9NR19 701 aa7.04□□□□□ -1.28
SYNE2-210ENST00000553455 TOMM22Q9NS69 142 aa7.04□□□□□ -1.28
SYNE2-210ENST00000553455 EID1Q9Y6B2 187 aa7.04□□□□□ -1.28
SYNE2-210ENST00000553455 SDHAP31040 664 aa7.03□□□□□ -1.28
SYNE2-210ENST00000553455 NR1I3Q14994 352 aa7.03□□□□□ -1.28
SYNE2-210ENST00000553455 TMEM132BQ14DG7 1078 aa7.03□□□□□ -1.28
SYNE2-210ENST00000553455 PLEKHN1Q494U1 663 aaPredicted RBP7.03□□□□□ -1.28
SYNE2-210ENST00000553455 ADGRF1Q5T601 910 aa7.03□□□□□ -1.28
SYNE2-210ENST00000553455 BTBD8Q5XKL5 378 aa7.03□□□□□ -1.28
SYNE2-210ENST00000553455 PASD1Q8IV76 773 aa7.03□□□□□ -1.28
SYNE2-210ENST00000553455 ZNF610Q8N9Z0 462 aa7.03□□□□□ -1.28
SYNE2-210ENST00000553455 TSPAN17Q96FV3 270 aa7.03□□□□□ -1.28
SYNE2-210ENST00000553455 YIPF4Q9BSR8 244 aa7.03□□□□□ -1.28
SYNE2-210ENST00000553455 RIC8BQ9NVN3 520 aa7.03□□□□□ -1.28
SYNE2-210ENST00000553455 CHPF2Q9P2E5 772 aa7.03□□□□□ -1.28
SYNE2-210ENST00000553455 KLHL14Q9P2G3 628 aa7.03□□□□□ -1.28
SYNE2-210ENST00000553455 TNKSO95271 1327 aa7.02□□□□□ -1.28
SYNE2-210ENST00000553455 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.02□□□□□ -1.29
SYNE2-210ENST00000553455 LCHNA4D1U4 455 aa7.02□□□□□ -1.29
SYNE2-210ENST00000553455 MPOP05164 745 aa7.02□□□□□ -1.29
SYNE2-210ENST00000553455 EPHB1P54762 984 aa7.02□□□□□ -1.29
SYNE2-210ENST00000553455 PRR5P85299 388 aa7.02□□□□□ -1.29
SYNE2-210ENST00000553455 GRIN1Q05586 938 aa7.02□□□□□ -1.29
SYNE2-210ENST00000553455 LRRC32Q14392 662 aa7.02□□□□□ -1.29
SYNE2-210ENST00000553455 RAB3GAP1Q15042 981 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms