RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 PLA2G4DQ86XP0 818 aa19.61■□□□□ 0.73
CHMP1A-208ENST00000550102 RPUSD2Q8IZ73 545 aaKnown RBP19.61■□□□□ 0.73
CHMP1A-208ENST00000550102 DAGLBQ8NCG7 672 aa19.61■□□□□ 0.73
CHMP1A-208ENST00000550102 AFAP1L1Q8TED9 768 aa19.61■□□□□ 0.73
CHMP1A-208ENST00000550102 DHX38Q92620 1227 aaKnown RBP19.61■□□□□ 0.73
CHMP1A-208ENST00000550102 AIFM3Q96NN9 605 aa19.61■□□□□ 0.73
CHMP1A-208ENST00000550102 PCDHA4Q9UN74 947 aa19.61■□□□□ 0.73
CHMP1A-208ENST00000550102 IGLV3-22A0A075B6J6 115 aa19.6■□□□□ 0.73
CHMP1A-208ENST00000550102 GSTTP1A0A1W2PQM5 241 aa19.6■□□□□ 0.73
CHMP1A-208ENST00000550102 C17orf102A2RUQ5 167 aa19.6■□□□□ 0.73
CHMP1A-208ENST00000550102 LARGE1O95461 756 aa19.6■□□□□ 0.73
CHMP1A-208ENST00000550102 XBP1P17861 261 aa19.6■□□□□ 0.73
CHMP1A-208ENST00000550102 SMAD3P84022 425 aaKnown RBP19.6■□□□□ 0.73
CHMP1A-208ENST00000550102 ITGB3BPQ13352 177 aaPredicted RBP19.6■□□□□ 0.73
CHMP1A-208ENST00000550102 ME3Q16798 604 aa19.6■□□□□ 0.73
CHMP1A-208ENST00000550102 C22orf23Q9BZE7 217 aa19.6■□□□□ 0.73
CHMP1A-208ENST00000550102 IQCF3P0C7M6 154 aa19.59■□□□□ 0.73
CHMP1A-208ENST00000550102 GNAT1P11488 350 aa19.59■□□□□ 0.73
CHMP1A-208ENST00000550102 SELPP16109 830 aa19.59■□□□□ 0.73
CHMP1A-208ENST00000550102 RASIP1Q5U651 963 aa19.59■□□□□ 0.73
CHMP1A-208ENST00000550102 LRRC8DQ7L1W4 858 aa19.59■□□□□ 0.73
CHMP1A-208ENST00000550102 SERINC5Q86VE9 423 aa19.59■□□□□ 0.73
CHMP1A-208ENST00000550102 BLIDQ8IZY5 108 aa19.59■□□□□ 0.73
CHMP1A-208ENST00000550102 NECAB1Q8N987 351 aa19.59■□□□□ 0.73
CHMP1A-208ENST00000550102 HERVK_113Q902F9 699 aa19.59■□□□□ 0.73
CHMP1A-208ENST00000550102 WASF1Q92558 559 aa19.59■□□□□ 0.73
CHMP1A-208ENST00000550102 GLG1Q92896 1179 aa19.59■□□□□ 0.73
CHMP1A-208ENST00000550102 ATP6V0A1Q93050 837 aa19.59■□□□□ 0.73
CHMP1A-208ENST00000550102 ERAP1Q9NZ08 941 aa19.59■□□□□ 0.73
CHMP1A-208ENST00000550102 ORC3Q9UBD5 711 aaPredicted RBP19.59■□□□□ 0.73
CHMP1A-208ENST00000550102 SIP14410 1827 aa19.58■□□□□ 0.73
CHMP1A-208ENST00000550102 IPO5O00410 1097 aaKnown RBP19.58■□□□□ 0.72
CHMP1A-208ENST00000550102 CTDNEP1O95476 244 aa19.58■□□□□ 0.72
CHMP1A-208ENST00000550102 FGBP02675 491 aa19.58■□□□□ 0.72
CHMP1A-208ENST00000550102 CIITAP33076 1130 aa19.58■□□□□ 0.72
CHMP1A-208ENST00000550102 ACTR2P61160 394 aa19.58■□□□□ 0.72
CHMP1A-208ENST00000550102 ZNF200P98182 395 aaPredicted RBP19.58■□□□□ 0.72
CHMP1A-208ENST00000550102 HIC1Q14526 733 aa19.58■□□□□ 0.72
CHMP1A-208ENST00000550102 NPY5RQ15761 445 aa19.58■□□□□ 0.72
CHMP1A-208ENST00000550102 PRR16Q569H4 304 aa19.58■□□□□ 0.72
CHMP1A-208ENST00000550102 DEFB128Q7Z7B8 93 aa19.58■□□□□ 0.72
CHMP1A-208ENST00000550102 SMARCAD1Q9H4L7 1026 aa19.58■□□□□ 0.72
CHMP1A-208ENST00000550102 AZI2Q9H6S1 392 aa19.58■□□□□ 0.72
CHMP1A-208ENST00000550102 TCEAL9Q9UHQ7 104 aa19.58■□□□□ 0.72
CHMP1A-208ENST00000550102 LGR5O75473 907 aa19.57■□□□□ 0.72
CHMP1A-208ENST00000550102 PARNO95453 639 aaKnown RBP19.57■□□□□ 0.72
CHMP1A-208ENST00000550102 CKBP12277 381 aa19.57■□□□□ 0.72
CHMP1A-208ENST00000550102 MARK3P27448 753 aa19.57■□□□□ 0.72
CHMP1A-208ENST00000550102 TRIM71Q2Q1W2 868 aaKnown RBP19.57■□□□□ 0.72
CHMP1A-208ENST00000550102 LMBR1Q8WVP7 490 aa19.57■□□□□ 0.72
CHMP1A-208ENST00000550102 ZNF577Q9BSK1 485 aa19.57■□□□□ 0.72
CHMP1A-208ENST00000550102 PHF20Q9BVI0 1012 aa19.57■□□□□ 0.72
CHMP1A-208ENST00000550102 PTPRSQ13332 1948 aa19.57■□□□□ 0.72
CHMP1A-208ENST00000550102 NRCAMQ92823 1304 aa19.56■□□□□ 0.72
CHMP1A-208ENST00000550102 MICAL3Q7RTP6 2002 aa19.56■□□□□ 0.72
CHMP1A-208ENST00000550102 M0R2N6 131 aa19.56■□□□□ 0.72
CHMP1A-208ENST00000550102 DDX39AO00148 427 aaKnown RBP19.56■□□□□ 0.72
CHMP1A-208ENST00000550102 ACTN1P12814 892 aa19.56■□□□□ 0.72
CHMP1A-208ENST00000550102 RBM25P49756 843 aaKnown RBP19.56■□□□□ 0.72
CHMP1A-208ENST00000550102 USP11P51784 963 aa19.56■□□□□ 0.72
CHMP1A-208ENST00000550102 PPFIA1Q13136 1202 aa19.56■□□□□ 0.72
CHMP1A-208ENST00000550102 OTOP2Q7RTS6 562 aa19.56■□□□□ 0.72
CHMP1A-208ENST00000550102 KRT25Q7Z3Z0 450 aa19.56■□□□□ 0.72
CHMP1A-208ENST00000550102 DEFB123Q8N688 67 aa19.56■□□□□ 0.72
CHMP1A-208ENST00000550102 NSUN7Q8NE18 718 aaKnown RBP19.56■□□□□ 0.72
CHMP1A-208ENST00000550102 TBCKQ8TEA7 893 aa19.56■□□□□ 0.72
CHMP1A-208ENST00000550102 WNT8BQ93098 351 aa19.56■□□□□ 0.72
CHMP1A-208ENST00000550102 VWCEQ96DN2 955 aa19.56■□□□□ 0.72
CHMP1A-208ENST00000550102 RNPEPQ9H4A4 650 aa19.56■□□□□ 0.72
CHMP1A-208ENST00000550102 UPF2Q9HAU5 1272 aaKnown RBP19.56■□□□□ 0.72
CHMP1A-208ENST00000550102 SETD4Q9NVD3 440 aa19.56■□□□□ 0.72
CHMP1A-208ENST00000550102 KCNJ14Q9UNX9 436 aa19.56■□□□□ 0.72
CHMP1A-208ENST00000550102 LIMCH1Q9UPQ0 1083 aa19.56■□□□□ 0.72
CHMP1A-208ENST00000550102 TREHO43280 583 aa19.55■□□□□ 0.72
CHMP1A-208ENST00000550102 CCNE2O96020 404 aa19.55■□□□□ 0.72
CHMP1A-208ENST00000550102 NONOQ15233 471 aaKnown RBP eCLIP19.55■□□□□ 0.72
CHMP1A-208ENST00000550102 FAM109BQ6ICB4 259 aaPredicted RBP19.55■□□□□ 0.72
CHMP1A-208ENST00000550102 Q7L0L9 218 aa19.55■□□□□ 0.72
CHMP1A-208ENST00000550102 LENG9Q96B70 501 aa19.55■□□□□ 0.72
CHMP1A-208ENST00000550102 PCYT2Q99447 389 aa19.55■□□□□ 0.72
CHMP1A-208ENST00000550102 FTOQ9C0B1 505 aaKnown RBP eCLIP19.55■□□□□ 0.72
CHMP1A-208ENST00000550102 TBC1D22BQ9NU19 505 aa19.55■□□□□ 0.72
CHMP1A-208ENST00000550102 CXXC1Q9P0U4 656 aaPredicted RBP19.55■□□□□ 0.72
CHMP1A-208ENST00000550102 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.54■□□□□ 0.72
CHMP1A-208ENST00000550102 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.54■□□□□ 0.72
CHMP1A-208ENST00000550102 ZBBXA8MT70 800 aa19.54■□□□□ 0.72
CHMP1A-208ENST00000550102 DHX15O43143 795 aaKnown RBP19.54■□□□□ 0.72
CHMP1A-208ENST00000550102 DTNBO60941 627 aa19.54■□□□□ 0.72
CHMP1A-208ENST00000550102 CAND2O75155 1236 aa19.54■□□□□ 0.72
CHMP1A-208ENST00000550102 THPOP40225 353 aa19.54■□□□□ 0.72
CHMP1A-208ENST00000550102 KRT76Q01546 638 aa19.54■□□□□ 0.72
CHMP1A-208ENST00000550102 ZNF697Q5TEC3 545 aa19.54■□□□□ 0.72
CHMP1A-208ENST00000550102 KIF2CQ99661 725 aa19.54■□□□□ 0.72
CHMP1A-208ENST00000550102 CHD9Q3L8U1 2897 aa19.53■□□□□ 0.72
CHMP1A-208ENST00000550102 CCDC194A0A1B0GVG4 234 aa19.53■□□□□ 0.72
CHMP1A-208ENST00000550102 BACH1O14867 736 aa19.53■□□□□ 0.72
CHMP1A-208ENST00000550102 ATG7O95352 703 aa19.53■□□□□ 0.72
CHMP1A-208ENST00000550102 SLC26A2P50443 739 aa19.53■□□□□ 0.72
CHMP1A-208ENST00000550102 ADAM17P78536 824 aa19.53■□□□□ 0.72
CHMP1A-208ENST00000550102 GRIK4Q16099 956 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms