RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 LTFP02788 710 aa8.61□□□□□ -1.03
LEMD3-206ENST00000545026 ARL4AP40617 200 aa8.61□□□□□ -1.03
LEMD3-206ENST00000545026 KIF11P52732 1056 aa8.61□□□□□ -1.03
LEMD3-206ENST00000545026 SESN3P58005 492 aa8.61□□□□□ -1.03
LEMD3-206ENST00000545026 TUSC3Q13454 348 aa8.61□□□□□ -1.03
LEMD3-206ENST00000545026 ZNF174Q15697 407 aa8.61□□□□□ -1.03
LEMD3-206ENST00000545026 DDB1Q16531 1140 aa8.61□□□□□ -1.03
LEMD3-206ENST00000545026 HDGFL2Q7Z4V5 671 aaPredicted RBP8.61□□□□□ -1.03
LEMD3-206ENST00000545026 CLRN3Q8NCR9 226 aa8.61□□□□□ -1.03
LEMD3-206ENST00000545026 MENTQ9BUN1 341 aa8.61□□□□□ -1.03
LEMD3-206ENST00000545026 RC3H2Q9HBD1 1191 aaKnown RBP8.61□□□□□ -1.03
LEMD3-206ENST00000545026 CHPF2Q9P2E5 772 aa8.61□□□□□ -1.03
LEMD3-206ENST00000545026 ASH2LQ9UBL3 628 aa8.61□□□□□ -1.03
LEMD3-206ENST00000545026 PALD1Q9ULE6 856 aa8.61□□□□□ -1.03
LEMD3-206ENST00000545026 FAM90A27PA6NNH2 459 aa8.6□□□□□ -1.03
LEMD3-206ENST00000545026 HIP1RO75146 1068 aa8.6□□□□□ -1.03
LEMD3-206ENST00000545026 CYBBP04839 570 aa8.6□□□□□ -1.03
LEMD3-206ENST00000545026 ERVFRD-1P60508 538 aa8.6□□□□□ -1.03
LEMD3-206ENST00000545026 ERVK-21P61565 698 aa8.6□□□□□ -1.03
LEMD3-206ENST00000545026 SMAD3P84022 425 aaKnown RBP8.6□□□□□ -1.03
LEMD3-206ENST00000545026 MCL1Q07820 350 aa8.6□□□□□ -1.03
LEMD3-206ENST00000545026 FAPQ12884 760 aa8.6□□□□□ -1.03
LEMD3-206ENST00000545026 TERF2Q15554 542 aa8.6□□□□□ -1.03
LEMD3-206ENST00000545026 SMAD2Q15796 467 aaKnown RBP8.6□□□□□ -1.03
LEMD3-206ENST00000545026 BROXQ5VW32 411 aa8.6□□□□□ -1.03
LEMD3-206ENST00000545026 PAQR3Q6TCH7 311 aa8.6□□□□□ -1.03
LEMD3-206ENST00000545026 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.6□□□□□ -1.03
LEMD3-206ENST00000545026 PASD1Q8IV76 773 aa8.6□□□□□ -1.03
LEMD3-206ENST00000545026 CLEC4DQ8WXI8 215 aa8.6□□□□□ -1.03
LEMD3-206ENST00000545026 SMAD5Q99717 465 aaKnown RBP8.6□□□□□ -1.03
LEMD3-206ENST00000545026 RNF32Q9H0A6 362 aa8.6□□□□□ -1.03
LEMD3-206ENST00000545026 AP5M1Q9H0R1 490 aa8.6□□□□□ -1.03
LEMD3-206ENST00000545026 KCNH7Q9NS40 1196 aa8.6□□□□□ -1.03
LEMD3-206ENST00000545026 PCDHB4Q9Y5E5 795 aa8.6□□□□□ -1.03
LEMD3-206ENST00000545026 TCRBV5S2A0A599 114 aa8.59□□□□□ -1.03
LEMD3-206ENST00000545026 ZC3H12DA2A288 527 aaKnown RBP8.59□□□□□ -1.03
LEMD3-206ENST00000545026 NEK2P51955 445 aa8.59□□□□□ -1.03
LEMD3-206ENST00000545026 EPHB1P54762 984 aa8.59□□□□□ -1.03
LEMD3-206ENST00000545026 PHC1P78364 1004 aa8.59□□□□□ -1.03
LEMD3-206ENST00000545026 CC2D1AQ6P1N0 951 aaPredicted RBP8.59□□□□□ -1.03
LEMD3-206ENST00000545026 CBARPQ8N350 705 aaPredicted RBP8.59□□□□□ -1.03
LEMD3-206ENST00000545026 FLAD1Q8NFF5 587 aa8.59□□□□□ -1.03
LEMD3-206ENST00000545026 ABHD4Q8TB40 342 aa8.59□□□□□ -1.03
LEMD3-206ENST00000545026 PEX11GQ96HA9 241 aa8.59□□□□□ -1.03
LEMD3-206ENST00000545026 PCIF1Q9H4Z3 704 aa8.59□□□□□ -1.03
LEMD3-206ENST00000545026 ACSS2Q9NR19 701 aa8.59□□□□□ -1.03
LEMD3-206ENST00000545026 TOMM22Q9NS69 142 aa8.59□□□□□ -1.03
LEMD3-206ENST00000545026 YBX2Q9Y2T7 364 aaKnown RBP8.59□□□□□ -1.03
LEMD3-206ENST00000545026 HYAL3O43820 417 aaPredicted RBP8.58□□□□□ -1.04
LEMD3-206ENST00000545026 BUB1BO60566 1050 aaPredicted RBP8.58□□□□□ -1.04
LEMD3-206ENST00000545026 C4BPAP04003 597 aaKnown RBP8.58□□□□□ -1.04
LEMD3-206ENST00000545026 PTPN1P18031 435 aaKnown RBP8.58□□□□□ -1.04
LEMD3-206ENST00000545026 PTX3P26022 381 aaPredicted RBP8.58□□□□□ -1.04
LEMD3-206ENST00000545026 GJA4P35212 333 aa8.58□□□□□ -1.04
LEMD3-206ENST00000545026 LRP8Q14114 963 aa8.58□□□□□ -1.04
LEMD3-206ENST00000545026 INAVAQ3KP66 663 aa8.58□□□□□ -1.04
LEMD3-206ENST00000545026 GPR158Q5T848 1215 aa8.58□□□□□ -1.04
LEMD3-206ENST00000545026 BTBD8Q5XKL5 378 aa8.58□□□□□ -1.04
LEMD3-206ENST00000545026 MILR1Q7Z6M3 343 aa8.58□□□□□ -1.04
LEMD3-206ENST00000545026 TRIM48Q8IWZ4 208 aa8.58□□□□□ -1.04
LEMD3-206ENST00000545026 YIPF4Q9BSR8 244 aa8.58□□□□□ -1.04
LEMD3-206ENST00000545026 ZMAT4Q9H898 229 aa8.58□□□□□ -1.04
LEMD3-206ENST00000545026 NUDT5Q9UKK9 219 aa8.58□□□□□ -1.04
LEMD3-206ENST00000545026 TNKSO95271 1327 aa8.57□□□□□ -1.04
LEMD3-206ENST00000545026 F8W031 263 aaPredicted RBP8.57□□□□□ -1.04
LEMD3-206ENST00000545026 CYP17A1P05093 508 aa8.57□□□□□ -1.04
LEMD3-206ENST00000545026 SDHBP21912 280 aa8.57□□□□□ -1.04
LEMD3-206ENST00000545026 LSP1P33241 339 aa8.57□□□□□ -1.04
LEMD3-206ENST00000545026 AFMP43652 599 aa8.57□□□□□ -1.04
LEMD3-206ENST00000545026 ZMYM1Q5SVZ6 1142 aa8.57□□□□□ -1.04
LEMD3-206ENST00000545026 FYB2Q5VWT5 728 aa8.57□□□□□ -1.04
LEMD3-206ENST00000545026 RASSF3Q86WH2 238 aa8.57□□□□□ -1.04
LEMD3-206ENST00000545026 ABI1Q8IZP0 508 aa8.57□□□□□ -1.04
LEMD3-206ENST00000545026 ZNF610Q8N9Z0 462 aa8.57□□□□□ -1.04
LEMD3-206ENST00000545026 AHCYL2Q96HN2 611 aaKnown RBP8.57□□□□□ -1.04
LEMD3-206ENST00000545026 SPEF1Q9Y4P9 236 aa8.57□□□□□ -1.04
LEMD3-206ENST00000545026 ACOT7O00154 380 aa8.56□□□□□ -1.04
LEMD3-206ENST00000545026 FBXO21O94952 628 aa8.56□□□□□ -1.04
LEMD3-206ENST00000545026 SDHAP31040 664 aa8.56□□□□□ -1.04
LEMD3-206ENST00000545026 LRRC32Q14392 662 aa8.56□□□□□ -1.04
LEMD3-206ENST00000545026 NR1I3Q14994 352 aa8.56□□□□□ -1.04
LEMD3-206ENST00000545026 TMEM132BQ14DG7 1078 aa8.56□□□□□ -1.04
LEMD3-206ENST00000545026 NFE2Q16621 373 aaPredicted RBP8.56□□□□□ -1.04
LEMD3-206ENST00000545026 CATSPEREQ5SY80 951 aa8.56□□□□□ -1.04
LEMD3-206ENST00000545026 ESRP1Q6NXG1 681 aaKnown RBP8.56□□□□□ -1.04
LEMD3-206ENST00000545026 FMNL3Q8IVF7 1028 aa8.56□□□□□ -1.04
LEMD3-206ENST00000545026 ARRDC4Q8NCT1 418 aa8.56□□□□□ -1.04
LEMD3-206ENST00000545026 MS4A5Q9H3V2 200 aa8.56□□□□□ -1.04
LEMD3-206ENST00000545026 RIC8BQ9NVN3 520 aa8.56□□□□□ -1.04
LEMD3-206ENST00000545026 ZBTB7AO95365 584 aa8.55□□□□□ -1.04
LEMD3-206ENST00000545026 MPOP05164 745 aa8.55□□□□□ -1.04
LEMD3-206ENST00000545026 RAB27AP51159 221 aa8.55□□□□□ -1.04
LEMD3-206ENST00000545026 RPTNQ6XPR3 784 aa8.55□□□□□ -1.04
LEMD3-206ENST00000545026 TTLL11Q8NHH1 800 aa8.55□□□□□ -1.04
LEMD3-206ENST00000545026 CHMP4CQ96CF2 233 aa8.55□□□□□ -1.04
LEMD3-206ENST00000545026 KIRREL1Q96J84 757 aa8.55□□□□□ -1.04
LEMD3-206ENST00000545026 C16orf92Q96LL3 132 aa8.55□□□□□ -1.04
LEMD3-206ENST00000545026 TOPORSQ9NS56 1045 aaPredicted RBP8.55□□□□□ -1.04
LEMD3-206ENST00000545026 C14orf119Q9NWQ9 140 aa8.55□□□□□ -1.04
LEMD3-206ENST00000545026 TCEAL9Q9UHQ7 104 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms