RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 ZNF76P36508 570 aa11.12□□□□□ -0.63
TNFRSF1A-214ENST00000543048 CLK2P49760 499 aaKnown RBP11.12□□□□□ -0.63
TNFRSF1A-214ENST00000543048 SMAD3P84022 425 aaKnown RBP11.12□□□□□ -0.63
TNFRSF1A-214ENST00000543048 SSRP1Q08945 709 aaKnown RBP11.12□□□□□ -0.63
TNFRSF1A-214ENST00000543048 AP3B2Q13367 1082 aa11.12□□□□□ -0.63
TNFRSF1A-214ENST00000543048 JAKMIP3Q5VZ66 844 aa11.12□□□□□ -0.63
TNFRSF1A-214ENST00000543048 FAM109BQ6ICB4 259 aaPredicted RBP11.12□□□□□ -0.63
TNFRSF1A-214ENST00000543048 PSRC1Q6PGN9 363 aaPredicted RBP11.12□□□□□ -0.63
TNFRSF1A-214ENST00000543048 DEFB123Q8N688 67 aa11.12□□□□□ -0.63
TNFRSF1A-214ENST00000543048 CCDC155Q8N6L0 562 aa11.12□□□□□ -0.63
TNFRSF1A-214ENST00000543048 LARP6Q9BRS8 491 aaKnown RBP11.12□□□□□ -0.63
TNFRSF1A-214ENST00000543048 SLC26A6Q9BXS9 759 aa11.12□□□□□ -0.63
TNFRSF1A-214ENST00000543048 ANO3Q9BYT9 981 aa11.12□□□□□ -0.63
TNFRSF1A-214ENST00000543048 ZMYND12Q9H0C1 365 aa11.12□□□□□ -0.63
TNFRSF1A-214ENST00000543048 WNT8AQ9H1J5 351 aa11.12□□□□□ -0.63
TNFRSF1A-214ENST00000543048 TUT1Q9H6E5 874 aaKnown RBP11.12□□□□□ -0.63
TNFRSF1A-214ENST00000543048 NCOA5Q9HCD5 579 aaKnown RBP11.12□□□□□ -0.63
TNFRSF1A-214ENST00000543048 TMEM260Q9NX78 707 aa11.12□□□□□ -0.63
TNFRSF1A-214ENST00000543048 GTF2IRD1Q9UHL9 959 aa11.12□□□□□ -0.63
TNFRSF1A-214ENST00000543048 EVPLQ92817 2033 aa11.11□□□□□ -0.63
TNFRSF1A-214ENST00000543048 MEIS1O00470 390 aa11.11□□□□□ -0.63
TNFRSF1A-214ENST00000543048 CPLX1O14810 134 aa11.11□□□□□ -0.63
TNFRSF1A-214ENST00000543048 LGALS2P05162 132 aa11.11□□□□□ -0.63
TNFRSF1A-214ENST00000543048 IQCF3P0C7M6 154 aa11.11□□□□□ -0.63
TNFRSF1A-214ENST00000543048 KCNA2P16389 499 aa11.11□□□□□ -0.63
TNFRSF1A-214ENST00000543048 RFC2P35250 354 aa11.11□□□□□ -0.63
TNFRSF1A-214ENST00000543048 MTMR1Q13613 665 aa11.11□□□□□ -0.63
TNFRSF1A-214ENST00000543048 CEP55Q53EZ4 464 aa11.11□□□□□ -0.63
TNFRSF1A-214ENST00000543048 RASIP1Q5U651 963 aa11.11□□□□□ -0.63
TNFRSF1A-214ENST00000543048 CPLX2Q6PUV4 134 aaKnown RBP11.11□□□□□ -0.63
TNFRSF1A-214ENST00000543048 TRIM22Q8IYM9 498 aa11.11□□□□□ -0.63
TNFRSF1A-214ENST00000543048 CAGE1Q8TC20 777 aa11.11□□□□□ -0.63
TNFRSF1A-214ENST00000543048 BICD2Q8TD16 824 aa11.11□□□□□ -0.63
TNFRSF1A-214ENST00000543048 SEPT1Q8WYJ6 367 aa11.11□□□□□ -0.63
TNFRSF1A-214ENST00000543048 HERVK_113Q902F9 699 aa11.11□□□□□ -0.63
TNFRSF1A-214ENST00000543048 SCLYQ96I15 445 aa11.11□□□□□ -0.63
TNFRSF1A-214ENST00000543048 PGBD1Q96JS3 809 aa11.11□□□□□ -0.63
TNFRSF1A-214ENST00000543048 CTAGE1Q96RT6 745 aa11.11□□□□□ -0.63
TNFRSF1A-214ENST00000543048 MTIF3Q9H2K0 278 aaKnown RBP11.11□□□□□ -0.63
TNFRSF1A-214ENST00000543048 SH3GLB2Q9NR46 395 aa11.11□□□□□ -0.63
TNFRSF1A-214ENST00000543048 LOXHD1Q8IVV2 1947 aa11.1□□□□□ -0.63
TNFRSF1A-214ENST00000543048 GSTTP1A0A1W2PQM5 241 aa11.1□□□□□ -0.63
TNFRSF1A-214ENST00000543048 PPFIA3O75145 1194 aa11.1□□□□□ -0.63
TNFRSF1A-214ENST00000543048 PFKMP08237 780 aa11.1□□□□□ -0.63
TNFRSF1A-214ENST00000543048 CYP3A4P08684 503 aa11.1□□□□□ -0.63
TNFRSF1A-214ENST00000543048 SREBF1P36956 1147 aa11.1□□□□□ -0.63
TNFRSF1A-214ENST00000543048 STK3Q13188 491 aa11.1□□□□□ -0.63
TNFRSF1A-214ENST00000543048 PTK7Q13308 1070 aa11.1□□□□□ -0.63
TNFRSF1A-214ENST00000543048 ANKRD1Q15327 319 aa11.1□□□□□ -0.63
TNFRSF1A-214ENST00000543048 UTP14CQ5TAP6 766 aaKnown RBP11.1□□□□□ -0.63
TNFRSF1A-214ENST00000543048 TMEM92Q6UXU6 159 aa11.1□□□□□ -0.63
TNFRSF1A-214ENST00000543048 Q7L0L9 218 aa11.1□□□□□ -0.63
TNFRSF1A-214ENST00000543048 NIPA1Q7RTP0 329 aa11.1□□□□□ -0.63
TNFRSF1A-214ENST00000543048 CCDC148Q8NFR7 591 aa11.1□□□□□ -0.63
TNFRSF1A-214ENST00000543048 CYP2W1Q8TAV3 490 aa11.1□□□□□ -0.63
TNFRSF1A-214ENST00000543048 AFAP1L1Q8TED9 768 aa11.1□□□□□ -0.63
TNFRSF1A-214ENST00000543048 RNPEPQ9H4A4 650 aa11.1□□□□□ -0.63
TNFRSF1A-214ENST00000543048 KCNH7Q9NS40 1196 aa11.1□□□□□ -0.63
TNFRSF1A-214ENST00000543048 MTMR10Q9NXD2 777 aa11.1□□□□□ -0.63
TNFRSF1A-214ENST00000543048 TELO2Q9Y4R8 837 aa11.1□□□□□ -0.63
TNFRSF1A-214ENST00000543048 TANC1Q9C0D5 1861 aa11.1□□□□□ -0.63
TNFRSF1A-214ENST00000543048 C17orf102A2RUQ5 167 aa11.09□□□□□ -0.63
TNFRSF1A-214ENST00000543048 DEXIO95424 95 aa11.09□□□□□ -0.63
TNFRSF1A-214ENST00000543048 PARNO95453 639 aaKnown RBP11.09□□□□□ -0.63
TNFRSF1A-214ENST00000543048 SMIM10L2AP0DMW4 78 aa11.09□□□□□ -0.63
TNFRSF1A-214ENST00000543048 SMIM10L2BP0DMW5 78 aa11.09□□□□□ -0.63
TNFRSF1A-214ENST00000543048 ARP10275 920 aa11.09□□□□□ -0.63
TNFRSF1A-214ENST00000543048 GNAT1P11488 350 aa11.09□□□□□ -0.63
TNFRSF1A-214ENST00000543048 SELPP16109 830 aa11.09□□□□□ -0.63
TNFRSF1A-214ENST00000543048 NLRP5P59047 1200 aa11.09□□□□□ -0.63
TNFRSF1A-214ENST00000543048 ARHGAP4P98171 946 aa11.09□□□□□ -0.63
TNFRSF1A-214ENST00000543048 ZNF200P98182 395 aaPredicted RBP11.09□□□□□ -0.63
TNFRSF1A-214ENST00000543048 SP4Q02446 784 aa11.09□□□□□ -0.63
TNFRSF1A-214ENST00000543048 OTOP2Q7RTS6 562 aa11.09□□□□□ -0.63
TNFRSF1A-214ENST00000543048 DEFB128Q7Z7B8 93 aa11.09□□□□□ -0.63
TNFRSF1A-214ENST00000543048 REXO1Q8N1G1 1221 aaKnown RBP11.09□□□□□ -0.63
TNFRSF1A-214ENST00000543048 VWCEQ96DN2 955 aa11.09□□□□□ -0.63
TNFRSF1A-214ENST00000543048 IL17RAQ96F46 866 aa11.09□□□□□ -0.63
TNFRSF1A-214ENST00000543048 SDF4Q9BRK5 362 aa11.09□□□□□ -0.63
TNFRSF1A-214ENST00000543048 FTOQ9C0B1 505 aaKnown RBP eCLIP11.09□□□□□ -0.63
TNFRSF1A-214ENST00000543048 SLKQ9H2G2 1235 aaPredicted RBP11.09□□□□□ -0.63
TNFRSF1A-214ENST00000543048 SEMA6BQ9H3T3 888 aa11.09□□□□□ -0.63
TNFRSF1A-214ENST00000543048 SMARCAD1Q9H4L7 1026 aa11.09□□□□□ -0.63
TNFRSF1A-214ENST00000543048 PKD2L1Q9P0L9 805 aa11.09□□□□□ -0.63
TNFRSF1A-214ENST00000543048 VPS54Q9P1Q0 977 aa11.09□□□□□ -0.63
TNFRSF1A-214ENST00000543048 ZNF215Q9UL58 517 aaPredicted RBP11.09□□□□□ -0.63
TNFRSF1A-214ENST00000543048 NFASCO94856 1347 aa11.09□□□□□ -0.63
TNFRSF1A-214ENST00000543048 ADAMTS3O15072 1205 aa11.08□□□□□ -0.64
TNFRSF1A-214ENST00000543048 PFKFB2O60825 505 aa11.08□□□□□ -0.64
TNFRSF1A-214ENST00000543048 CDKL5O76039 1030 aa11.08□□□□□ -0.64
TNFRSF1A-214ENST00000543048 CKBP12277 381 aa11.08□□□□□ -0.64
TNFRSF1A-214ENST00000543048 ACTN1P12814 892 aa11.08□□□□□ -0.64
TNFRSF1A-214ENST00000543048 TCF7P36402 384 aaPredicted RBP11.08□□□□□ -0.64
TNFRSF1A-214ENST00000543048 RBL2Q08999 1139 aa11.08□□□□□ -0.64
TNFRSF1A-214ENST00000543048 HIC1Q14526 733 aa11.08□□□□□ -0.64
TNFRSF1A-214ENST00000543048 ZNF697Q5TEC3 545 aa11.08□□□□□ -0.64
TNFRSF1A-214ENST00000543048 PLA2G4DQ86XP0 818 aa11.08□□□□□ -0.64
TNFRSF1A-214ENST00000543048 FAM177A1Q8N128 213 aaPredicted RBP11.08□□□□□ -0.64
TNFRSF1A-214ENST00000543048 CRYGNQ8WXF5 182 aa11.08□□□□□ -0.64
TNFRSF1A-214ENST00000543048 DHX38Q92620 1227 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms