RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 TM6SF1Q9BZW5 370 aa17.12■□□□□ 0.33
RAB40B-202ENST00000538809 RNPEPQ9H4A4 650 aa17.12■□□□□ 0.33
RAB40B-202ENST00000538809 JADE2Q9NQC1 790 aa17.12■□□□□ 0.33
RAB40B-202ENST00000538809 SETD4Q9NVD3 440 aa17.12■□□□□ 0.33
RAB40B-202ENST00000538809 PCDHA11Q9Y5I1 949 aa17.12■□□□□ 0.33
RAB40B-202ENST00000538809 CCDC196A0A1B0GTZ2 297 aa17.11■□□□□ 0.33
RAB40B-202ENST00000538809 ADAMTS3O15072 1205 aa17.11■□□□□ 0.33
RAB40B-202ENST00000538809 BAIAP3O94812 1187 aa17.11■□□□□ 0.33
RAB40B-202ENST00000538809 CXCL10P02778 98 aa17.11■□□□□ 0.33
RAB40B-202ENST00000538809 SCG2P13521 617 aa17.11■□□□□ 0.33
RAB40B-202ENST00000538809 MARK3P27448 753 aa17.11■□□□□ 0.33
RAB40B-202ENST00000538809 THPOP40225 353 aa17.11■□□□□ 0.33
RAB40B-202ENST00000538809 KCNJ6P48051 423 aa17.11■□□□□ 0.33
RAB40B-202ENST00000538809 WDR5P61964 334 aaKnown RBP17.11■□□□□ 0.33
RAB40B-202ENST00000538809 NTRK3Q16288 839 aa17.11■□□□□ 0.33
RAB40B-202ENST00000538809 CNKSR3Q6P9H4 555 aa17.11■□□□□ 0.33
RAB40B-202ENST00000538809 TMCO2Q7Z6W1 182 aaPredicted RBP17.11■□□□□ 0.33
RAB40B-202ENST00000538809 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.11■□□□□ 0.33
RAB40B-202ENST00000538809 CYP2W1Q8TAV3 490 aa17.11■□□□□ 0.33
RAB40B-202ENST00000538809 PHKBQ93100 1093 aa17.11■□□□□ 0.33
RAB40B-202ENST00000538809 GAS2L1Q99501 681 aaPredicted RBP17.11■□□□□ 0.33
RAB40B-202ENST00000538809 MXRA8Q9BRK3 442 aa17.11■□□□□ 0.33
RAB40B-202ENST00000538809 GSTTP1A0A1W2PQM5 241 aa17.1■□□□□ 0.33
RAB40B-202ENST00000538809 PARNO95453 639 aaKnown RBP17.1■□□□□ 0.33
RAB40B-202ENST00000538809 CA3P07451 260 aa17.1■□□□□ 0.33
RAB40B-202ENST00000538809 CTSHP09668 335 aa17.1■□□□□ 0.33
RAB40B-202ENST00000538809 CLK2P49760 499 aaKnown RBP17.1■□□□□ 0.33
RAB40B-202ENST00000538809 DEFB103AP81534 67 aa17.1■□□□□ 0.33
RAB40B-202ENST00000538809 ARHGAP4P98171 946 aa17.1■□□□□ 0.33
RAB40B-202ENST00000538809 PKN1Q16512 942 aa17.1■□□□□ 0.33
RAB40B-202ENST00000538809 JAKMIP3Q5VZ66 844 aa17.1■□□□□ 0.33
RAB40B-202ENST00000538809 HERC6Q8IVU3 1022 aa17.1■□□□□ 0.33
RAB40B-202ENST00000538809 USP38Q8NB14 1042 aa17.1■□□□□ 0.33
RAB40B-202ENST00000538809 LMBR1Q8WVP7 490 aa17.1■□□□□ 0.33
RAB40B-202ENST00000538809 NCOA5Q9HCD5 579 aaKnown RBP17.1■□□□□ 0.33
RAB40B-202ENST00000538809 ARHGEF15O94989 841 aa17.09■□□□□ 0.33
RAB40B-202ENST00000538809 FOSP01100 380 aaPredicted RBP17.09■□□□□ 0.33
RAB40B-202ENST00000538809 ARP10275 920 aa17.09■□□□□ 0.33
RAB40B-202ENST00000538809 PDIA3P30101 505 aaKnown RBP17.09■□□□□ 0.33
RAB40B-202ENST00000538809 SREBF1P36956 1147 aa17.09■□□□□ 0.33
RAB40B-202ENST00000538809 CCT2P78371 535 aaKnown RBP17.09■□□□□ 0.33
RAB40B-202ENST00000538809 AP3B2Q13367 1082 aa17.09■□□□□ 0.33
RAB40B-202ENST00000538809 ADGRE1Q14246 886 aa17.09■□□□□ 0.33
RAB40B-202ENST00000538809 SEPT1Q8WYJ6 367 aa17.09■□□□□ 0.33
RAB40B-202ENST00000538809 JPH1Q9HDC5 661 aaPredicted RBP17.09■□□□□ 0.33
RAB40B-202ENST00000538809 KCNH7Q9NS40 1196 aa17.09■□□□□ 0.33
RAB40B-202ENST00000538809 PRRC2BQ5JSZ5 2229 aaKnown RBP17.09■□□□□ 0.33
RAB40B-202ENST00000538809 RSPH10B2B2RC85 870 aa17.08■□□□□ 0.32
RAB40B-202ENST00000538809 PRPF3O43395 683 aaKnown RBP17.08■□□□□ 0.32
RAB40B-202ENST00000538809 RSPH10BP0C881 870 aa17.08■□□□□ 0.32
RAB40B-202ENST00000538809 PHOSPHO2Q8TCD6 241 aa17.08■□□□□ 0.32
RAB40B-202ENST00000538809 PPM1EQ8WY54 764 aa17.08■□□□□ 0.32
RAB40B-202ENST00000538809 GLG1Q92896 1179 aa17.08■□□□□ 0.32
RAB40B-202ENST00000538809 IL17RAQ96F46 866 aa17.08■□□□□ 0.32
RAB40B-202ENST00000538809 LARP6Q9BRS8 491 aaKnown RBP17.08■□□□□ 0.32
RAB40B-202ENST00000538809 SLC26A6Q9BXS9 759 aa17.08■□□□□ 0.32
RAB40B-202ENST00000538809 OSBPL7Q9BZF2 842 aa17.08■□□□□ 0.32
RAB40B-202ENST00000538809 UPF3BQ9BZI7 483 aaKnown RBP17.08■□□□□ 0.32
RAB40B-202ENST00000538809 GLT8D2Q9H1C3 349 aa17.08■□□□□ 0.32
RAB40B-202ENST00000538809 CERS4Q9HA82 394 aa17.08■□□□□ 0.32
RAB40B-202ENST00000538809 SLC9A2Q9UBY0 812 aa17.08■□□□□ 0.32
RAB40B-202ENST00000538809 CYP46A1Q9Y6A2 500 aa17.08■□□□□ 0.32
RAB40B-202ENST00000538809 REV3LO60673 3130 aa17.07■□□□□ 0.32
RAB40B-202ENST00000538809 A0A0C4DFX4 3053 aa17.07■□□□□ 0.32
RAB40B-202ENST00000538809 TRANK1O15050 2925 aa17.07■□□□□ 0.32
RAB40B-202ENST00000538809 EMSYQ7Z589 1322 aa17.07■□□□□ 0.32
RAB40B-202ENST00000538809 ESYT2A0FGR8 921 aa17.07■□□□□ 0.32
RAB40B-202ENST00000538809 DDX39AO00148 427 aaKnown RBP17.07■□□□□ 0.32
RAB40B-202ENST00000538809 DLL1O00548 723 aa17.07■□□□□ 0.32
RAB40B-202ENST00000538809 LGR5O75473 907 aa17.07■□□□□ 0.32
RAB40B-202ENST00000538809 GNAT1P11488 350 aa17.07■□□□□ 0.32
RAB40B-202ENST00000538809 IFNAR1P17181 557 aa17.07■□□□□ 0.32
RAB40B-202ENST00000538809 IGFBP4P22692 258 aa17.07■□□□□ 0.32
RAB40B-202ENST00000538809 ZNF76P36508 570 aa17.07■□□□□ 0.32
RAB40B-202ENST00000538809 ADAM17P78536 824 aa17.07■□□□□ 0.32
RAB40B-202ENST00000538809 AKAP17AQ02040 695 aaKnown RBP17.07■□□□□ 0.32
RAB40B-202ENST00000538809 PPFIA1Q13136 1202 aa17.07■□□□□ 0.32
RAB40B-202ENST00000538809 ITGB3BPQ13352 177 aaPredicted RBP17.07■□□□□ 0.32
RAB40B-202ENST00000538809 CEP55Q53EZ4 464 aa17.07■□□□□ 0.32
RAB40B-202ENST00000538809 RUFY4Q6ZNE9 571 aa17.07■□□□□ 0.32
RAB40B-202ENST00000538809 RASGRP4Q8TDF6 673 aa17.07■□□□□ 0.32
RAB40B-202ENST00000538809 UIMC1Q96RL1 719 aa17.07■□□□□ 0.32
RAB40B-202ENST00000538809 SDF4Q9BRK5 362 aa17.07■□□□□ 0.32
RAB40B-202ENST00000538809 AGO4Q9HCK5 861 aaKnown RBP17.07■□□□□ 0.32
RAB40B-202ENST00000538809 ERAP1Q9NZ08 941 aa17.07■□□□□ 0.32
RAB40B-202ENST00000538809 RALGAPA2Q2PPJ7 1873 aa17.07■□□□□ 0.32
RAB40B-202ENST00000538809 ATG2AQ2TAZ0 1938 aa17.06■□□□□ 0.32
RAB40B-202ENST00000538809 NFASCO94856 1347 aa17.06■□□□□ 0.32
RAB40B-202ENST00000538809 NRCAMQ92823 1304 aa17.06■□□□□ 0.32
RAB40B-202ENST00000538809 MAFGO15525 162 aa17.06■□□□□ 0.32
RAB40B-202ENST00000538809 TLL1O43897 1013 aa17.06■□□□□ 0.32
RAB40B-202ENST00000538809 IKBKEQ14164 716 aa17.06■□□□□ 0.32
RAB40B-202ENST00000538809 GRIK4Q16099 956 aa17.06■□□□□ 0.32
RAB40B-202ENST00000538809 FAM117BQ6P1L5 589 aa17.06■□□□□ 0.32
RAB40B-202ENST00000538809 SPRED2Q7Z698 418 aa17.06■□□□□ 0.32
RAB40B-202ENST00000538809 REXO1Q8N1G1 1221 aaKnown RBP17.06■□□□□ 0.32
RAB40B-202ENST00000538809 CCDC12Q8WUD4 166 aaPredicted RBP17.06■□□□□ 0.32
RAB40B-202ENST00000538809 PCYT2Q99447 389 aa17.06■□□□□ 0.32
RAB40B-202ENST00000538809 RNF26Q9BY78 433 aaPredicted RBP17.06■□□□□ 0.32
RAB40B-202ENST00000538809 ZMYND12Q9H0C1 365 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms