RNA–Protein interactions for RNA: ENST00000534796.5

PTP4A2-216, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-216ENST00000534796 MTCH2Q9Y6C9 303 aa12.28□□□□□ -0.44
PTP4A2-216ENST00000534796 SCN5AQ14524 2016 aa12.27□□□□□ -0.44
PTP4A2-216ENST00000534796 MEIS2O14770 477 aa12.27□□□□□ -0.45
PTP4A2-216ENST00000534796 SMIM10L2AP0DMW4 78 aa12.27□□□□□ -0.45
PTP4A2-216ENST00000534796 SMIM10L2BP0DMW5 78 aa12.27□□□□□ -0.45
PTP4A2-216ENST00000534796 DEFB103AP81534 67 aa12.27□□□□□ -0.45
PTP4A2-216ENST00000534796 ZNF200P98182 395 aaPredicted RBP12.27□□□□□ -0.45
PTP4A2-216ENST00000534796 USP17L6PQ6QN14 398 aa12.27□□□□□ -0.45
PTP4A2-216ENST00000534796 SYNE3Q6ZMZ3 975 aa12.27□□□□□ -0.45
PTP4A2-216ENST00000534796 CYFIP1Q7L576 1253 aa12.27□□□□□ -0.45
PTP4A2-216ENST00000534796 GPKOWQ92917 476 aaPredicted RBP eCLIP12.27□□□□□ -0.454e-6■■■□□ 18.4
PTP4A2-216ENST00000534796 GPRASP2Q96D09 838 aa12.27□□□□□ -0.45
PTP4A2-216ENST00000534796 UHRF1Q96T88 793 aaPredicted RBP12.27□□□□□ -0.45
PTP4A2-216ENST00000534796 GPR20Q99678 358 aa12.27□□□□□ -0.45
PTP4A2-216ENST00000534796 ESYT1Q9BSJ8 1104 aa12.27□□□□□ -0.45
PTP4A2-216ENST00000534796 MYL10Q9BUA6 226 aa12.27□□□□□ -0.45
PTP4A2-216ENST00000534796 LSG1Q9H089 658 aaKnown RBP12.27□□□□□ -0.45
PTP4A2-216ENST00000534796 RTEL1Q9NZ71 1219 aa12.27□□□□□ -0.45
PTP4A2-216ENST00000534796 CHD7Q9P2D1 2997 aa12.27□□□□□ -0.45
PTP4A2-216ENST00000534796 INSL6Q9Y581 213 aa12.27□□□□□ -0.45
PTP4A2-216ENST00000534796 GBF1Q92538 1859 aa12.27□□□□□ -0.45
PTP4A2-216ENST00000534796 RFXAPO00287 272 aa12.26□□□□□ -0.45
PTP4A2-216ENST00000534796 SLC27A2O14975 620 aa12.26□□□□□ -0.45
PTP4A2-216ENST00000534796 MAFGO15525 162 aa12.26□□□□□ -0.45
PTP4A2-216ENST00000534796 GRB10Q13322 594 aa12.26□□□□□ -0.45
PTP4A2-216ENST00000534796 MBTPS1Q14703 1052 aa12.26□□□□□ -0.45
PTP4A2-216ENST00000534796 CREB3L3Q68CJ9 461 aa12.26□□□□□ -0.45
PTP4A2-216ENST00000534796 SRBD1Q8N5C6 995 aaKnown RBP12.26□□□□□ -0.45
PTP4A2-216ENST00000534796 SEPT8Q92599 483 aa12.26□□□□□ -0.45
PTP4A2-216ENST00000534796 WNT8BQ93098 351 aa12.26□□□□□ -0.45
PTP4A2-216ENST00000534796 TGS1Q96RS0 853 aaKnown RBP12.26□□□□□ -0.45
PTP4A2-216ENST00000534796 RNPEPQ9H4A4 650 aa12.26□□□□□ -0.45
PTP4A2-216ENST00000534796 EHMT1Q9H9B1 1298 aa12.26□□□□□ -0.45
PTP4A2-216ENST00000534796 ANO2Q9NQ90 1003 aa12.26□□□□□ -0.45
PTP4A2-216ENST00000534796 RYDENQ9NUL5 291 aaKnown RBP12.26□□□□□ -0.45
PTP4A2-216ENST00000534796 NRCAMQ92823 1304 aa12.26□□□□□ -0.45
PTP4A2-216ENST00000534796 EPOPA6NHQ4 379 aa12.25□□□□□ -0.45
PTP4A2-216ENST00000534796 SPDYE3A6NKU9 549 aa12.25□□□□□ -0.45
PTP4A2-216ENST00000534796 TREHO43280 583 aa12.25□□□□□ -0.45
PTP4A2-216ENST00000534796 ARHGEF15O94989 841 aa12.25□□□□□ -0.45
PTP4A2-216ENST00000534796 PLEKHA8P1O95397 391 aa12.25□□□□□ -0.45
PTP4A2-216ENST00000534796 ERVK-21P61565 698 aa12.25□□□□□ -0.45
PTP4A2-216ENST00000534796 SEMA3FQ13275 785 aa12.25□□□□□ -0.45
PTP4A2-216ENST00000534796 HIC1Q14526 733 aa12.25□□□□□ -0.45
PTP4A2-216ENST00000534796 NECTIN1Q15223 517 aa12.25□□□□□ -0.45
PTP4A2-216ENST00000534796 PLEKHG4Q58EX7 1191 aa12.25□□□□□ -0.45
PTP4A2-216ENST00000534796 BMP2KLQ5H9B9 411 aa12.25□□□□□ -0.45
PTP4A2-216ENST00000534796 SGMS1Q86VZ5 419 aa12.25□□□□□ -0.45
PTP4A2-216ENST00000534796 FANCBQ8NB91 859 aa12.25□□□□□ -0.45
PTP4A2-216ENST00000534796 DBF4BQ8NFT6 615 aa12.25□□□□□ -0.45
PTP4A2-216ENST00000534796 APBB2Q92870 758 aa12.25□□□□□ -0.45
PTP4A2-216ENST00000534796 TNPO1Q92973 898 aaKnown RBP12.25□□□□□ -0.45
PTP4A2-216ENST00000534796 SPTBN5Q9NRC6 3674 aaKnown RBP12.25□□□□□ -0.45
PTP4A2-216ENST00000534796 LCHNA4D1U4 455 aa12.24□□□□□ -0.45
PTP4A2-216ENST00000534796 LINC01553A4QN01 128 aa12.24□□□□□ -0.45
PTP4A2-216ENST00000534796 RPLP2P05387 115 aaKnown RBP12.24□□□□□ -0.45
PTP4A2-216ENST00000534796 ARHGAP4P98171 946 aa12.24□□□□□ -0.45
PTP4A2-216ENST00000534796 MTMR1Q13613 665 aa12.24□□□□□ -0.45
PTP4A2-216ENST00000534796 UTP14CQ5TAP6 766 aaKnown RBP12.24□□□□□ -0.45
PTP4A2-216ENST00000534796 TAF2Q6P1X5 1199 aa12.24□□□□□ -0.45
PTP4A2-216ENST00000534796 TMTC3Q6ZXV5 915 aa12.24□□□□□ -0.45
PTP4A2-216ENST00000534796 TMCO2Q7Z6W1 182 aaPredicted RBP12.24□□□□□ -0.45
PTP4A2-216ENST00000534796 RSPH3Q86UC2 560 aa12.24□□□□□ -0.45
PTP4A2-216ENST00000534796 MYOCDQ8IZQ8 938 aa12.24□□□□□ -0.45
PTP4A2-216ENST00000534796 TET1Q8NFU7 2136 aa12.24□□□□□ -0.45
PTP4A2-216ENST00000534796 SEPT1Q8WYJ6 367 aa12.24□□□□□ -0.45
PTP4A2-216ENST00000534796 HLA-CQ95604 372 aa12.24□□□□□ -0.45
PTP4A2-216ENST00000534796 MARVELD3Q96A59 401 aa12.24□□□□□ -0.45
PTP4A2-216ENST00000534796 SAMD11Q96NU1 681 aa12.24□□□□□ -0.45
PTP4A2-216ENST00000534796 SETD4Q9NVD3 440 aa12.24□□□□□ -0.45
PTP4A2-216ENST00000534796 RBM28Q9NW13 759 aaKnown RBP12.24□□□□□ -0.45
PTP4A2-216ENST00000534796 BAZ2BQ9UIF8 2168 aaKnown RBP12.24□□□□□ -0.45
PTP4A2-216ENST00000534796 hCG_1984214I3L0E3 225 aa12.23□□□□□ -0.45
PTP4A2-216ENST00000534796 LPXNO60711 386 aa12.23□□□□□ -0.45
PTP4A2-216ENST00000534796 BMP1P13497 986 aa12.23□□□□□ -0.45
PTP4A2-216ENST00000534796 ITGB5P18084 799 aa12.23□□□□□ -0.45
PTP4A2-216ENST00000534796 RXRAP19793 462 aa12.23□□□□□ -0.45
PTP4A2-216ENST00000534796 TCF7P36402 384 aaPredicted RBP12.23□□□□□ -0.45
PTP4A2-216ENST00000534796 HTRA4P83105 476 aaPredicted RBP12.23□□□□□ -0.45
PTP4A2-216ENST00000534796 SP4Q02446 784 aa12.23□□□□□ -0.45
PTP4A2-216ENST00000534796 TCTN1Q2MV58 587 aa12.23□□□□□ -0.45
PTP4A2-216ENST00000534796 FAM26DQ5JW98 314 aa12.23□□□□□ -0.45
PTP4A2-216ENST00000534796 PPP1R18Q6NYC8 613 aa12.23□□□□□ -0.45
PTP4A2-216ENST00000534796 FAM117BQ6P1L5 589 aa12.23□□□□□ -0.45
PTP4A2-216ENST00000534796 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.23□□□□□ -0.456e-19■■■■□ 21.3
PTP4A2-216ENST00000534796 HEATR3Q7Z4Q2 680 aa12.23□□□□□ -0.45
PTP4A2-216ENST00000534796 RPAINQ86UA6 219 aa12.23□□□□□ -0.45
PTP4A2-216ENST00000534796 MICU3Q86XE3 530 aa12.23□□□□□ -0.45
PTP4A2-216ENST00000534796 TRIM50Q86XT4 487 aa12.23□□□□□ -0.45
PTP4A2-216ENST00000534796 CMTR1Q8N1G2 835 aaKnown RBP12.23□□□□□ -0.45
PTP4A2-216ENST00000534796 ZNF713Q8N859 430 aaPredicted RBP12.23□□□□□ -0.45
PTP4A2-216ENST00000534796 LMBR1Q8WVP7 490 aa12.23□□□□□ -0.45
PTP4A2-216ENST00000534796 NEK1Q96PY6 1258 aa12.23□□□□□ -0.45
PTP4A2-216ENST00000534796 BCAS3Q9H6U6 928 aa12.23□□□□□ -0.45
PTP4A2-216ENST00000534796 SUGCTQ9HAC7 445 aa12.23□□□□□ -0.45
PTP4A2-216ENST00000534796 ERAP1Q9NZ08 941 aa12.23□□□□□ -0.45
PTP4A2-216ENST00000534796 UBIAD1Q9Y5Z9 338 aa12.23□□□□□ -0.45
PTP4A2-216ENST00000534796 NCOR1O75376 2440 aa12.23□□□□□ -0.45
PTP4A2-216ENST00000534796 TRIP12Q14669 1992 aaPredicted RBP12.23□□□□□ -0.45
PTP4A2-216ENST00000534796 TRANK1O15050 2925 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms