RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 CKMP06732 381 aa1.63□□□□□ -2.15
COPB1-212ENST00000534771 ENO2P09104 434 aaPredicted RBP1.63□□□□□ -2.15
COPB1-212ENST00000534771 ERCC3P19447 782 aa1.63□□□□□ -2.15
COPB1-212ENST00000534771 CR2P20023 1033 aa1.63□□□□□ -2.15
COPB1-212ENST00000534771 HIBADHP31937 336 aaKnown RBP1.63□□□□□ -2.15
COPB1-212ENST00000534771 CSF2RBP32927 897 aa1.63□□□□□ -2.15
COPB1-212ENST00000534771 KRTAP10-12P60413 245 aa1.63□□□□□ -2.15
COPB1-212ENST00000534771 RAC3P60763 192 aa1.63□□□□□ -2.15
COPB1-212ENST00000534771 COL10A1Q03692 680 aa1.63□□□□□ -2.15
COPB1-212ENST00000534771 LSAMPQ13449 338 aa1.63□□□□□ -2.15
COPB1-212ENST00000534771 ZNF568Q3ZCX4 644 aa1.63□□□□□ -2.15
COPB1-212ENST00000534771 KLHL22Q53GT1 634 aa1.63□□□□□ -2.15
COPB1-212ENST00000534771 E4F1Q66K89 784 aaPredicted RBP1.63□□□□□ -2.15
COPB1-212ENST00000534771 VASNQ6EMK4 673 aa1.63□□□□□ -2.15
COPB1-212ENST00000534771 KIAA1211LQ6NV74 962 aa1.63□□□□□ -2.15
COPB1-212ENST00000534771 SYCE2Q6PIF2 218 aa1.63□□□□□ -2.15
COPB1-212ENST00000534771 MAMDC4Q6UXC1 1216 aa1.63□□□□□ -2.15
COPB1-212ENST00000534771 SND1Q7KZF4 910 aaKnown RBP eCLIP1.63□□□□□ -2.153e-6■■■□□ 16.8
COPB1-212ENST00000534771 POLNQ7Z5Q5 900 aa1.63□□□□□ -2.15
COPB1-212ENST00000534771 TRIM48Q8IWZ4 208 aa1.63□□□□□ -2.15
COPB1-212ENST00000534771 Q8N1Y9 231 aa1.63□□□□□ -2.15
COPB1-212ENST00000534771 TMEM87AQ8NBN3 555 aa1.63□□□□□ -2.15
COPB1-212ENST00000534771 RCBTB1Q8NDN9 531 aa1.63□□□□□ -2.15
COPB1-212ENST00000534771 IL17DQ8TAD2 202 aa1.63□□□□□ -2.15
COPB1-212ENST00000534771 PHOSPHO1Q8TCT1 267 aa1.63□□□□□ -2.15
COPB1-212ENST00000534771 FRS2Q8WU20 508 aa1.63□□□□□ -2.15
COPB1-212ENST00000534771 DIO2Q92813 273 aa1.63□□□□□ -2.15
COPB1-212ENST00000534771 NEIL1Q96FI4 390 aaPredicted RBP1.63□□□□□ -2.15
COPB1-212ENST00000534771 BBC3Q96PG8 261 aaPredicted RBP1.63□□□□□ -2.15
COPB1-212ENST00000534771 CARD11Q9BXL7 1154 aa1.63□□□□□ -2.15
COPB1-212ENST00000534771 KATNBL1Q9H079 304 aa1.63□□□□□ -2.15
COPB1-212ENST00000534771 SMOC1Q9H4F8 434 aa1.63□□□□□ -2.15
COPB1-212ENST00000534771 MMRN2Q9H8L6 949 aa1.63□□□□□ -2.15
COPB1-212ENST00000534771 AURKAIP1Q9NWT8 199 aaPredicted RBP1.63□□□□□ -2.15
COPB1-212ENST00000534771 ARNTLO00327 626 aa1.62□□□□□ -2.15
COPB1-212ENST00000534771 KRIT1O00522 736 aa1.62□□□□□ -2.15
COPB1-212ENST00000534771 CDC14BO60729 498 aa1.62□□□□□ -2.15
COPB1-212ENST00000534771 CBSLP0DN79 551 aa1.62□□□□□ -2.15
COPB1-212ENST00000534771 ACRV1P26436 265 aa1.62□□□□□ -2.15
COPB1-212ENST00000534771 HOXC12P31275 282 aa1.62□□□□□ -2.15
COPB1-212ENST00000534771 DNAJA1P31689 397 aaKnown RBP1.62□□□□□ -2.15
COPB1-212ENST00000534771 CBSP35520 551 aa1.62□□□□□ -2.15
COPB1-212ENST00000534771 COL9A2Q14055 689 aaPredicted RBP1.62□□□□□ -2.15
COPB1-212ENST00000534771 USP10Q14694 798 aaKnown RBP1.62□□□□□ -2.15
COPB1-212ENST00000534771 PPP2R5EQ16537 467 aa1.62□□□□□ -2.15
COPB1-212ENST00000534771 EMC4Q5J8M3 183 aa1.62□□□□□ -2.15
COPB1-212ENST00000534771 PHF19Q5T6S3 580 aa1.62□□□□□ -2.15
COPB1-212ENST00000534771 FNDC7Q5VTL7 733 aa1.62□□□□□ -2.15
COPB1-212ENST00000534771 GTF2IRD2BQ6EKJ0 949 aa1.62□□□□□ -2.15
COPB1-212ENST00000534771 ZNF627Q7L945 461 aa1.62□□□□□ -2.15
COPB1-212ENST00000534771 GPR155Q7Z3F1 870 aa1.62□□□□□ -2.15
COPB1-212ENST00000534771 GTF2IRD2Q86UP8 949 aa1.62□□□□□ -2.15
COPB1-212ENST00000534771 REXO1L1PQ8IX06 675 aa1.62□□□□□ -2.15
COPB1-212ENST00000534771 ZNF513Q8N8E2 541 aaPredicted RBP1.62□□□□□ -2.15
COPB1-212ENST00000534771 DTX3Q8N9I9 347 aa1.62□□□□□ -2.15
COPB1-212ENST00000534771 NPLOC4Q8TAT6 608 aa1.62□□□□□ -2.15
COPB1-212ENST00000534771 ZNF483Q8TF39 744 aaPredicted RBP1.62□□□□□ -2.15
COPB1-212ENST00000534771 PPIL4Q8WUA2 492 aaKnown RBP eCLIP1.62□□□□□ -2.15
COPB1-212ENST00000534771 CACTINQ8WUQ7 758 aaKnown RBP1.62□□□□□ -2.15
COPB1-212ENST00000534771 CLEC4DQ8WXI8 215 aa1.62□□□□□ -2.15
COPB1-212ENST00000534771 KLHL6Q8WZ60 621 aa1.62□□□□□ -2.15
COPB1-212ENST00000534771 PPP1R14AQ96A00 147 aa1.62□□□□□ -2.15
COPB1-212ENST00000534771 CCDC140Q96MF4 163 aa1.62□□□□□ -2.15
COPB1-212ENST00000534771 BCL11AQ9H165 835 aa1.62□□□□□ -2.15
COPB1-212ENST00000534771 NKX2-4Q9H2Z4 354 aa1.62□□□□□ -2.15
COPB1-212ENST00000534771 ZNF703Q9H7S9 590 aaPredicted RBP1.62□□□□□ -2.15
COPB1-212ENST00000534771 ARHGAP20Q9P2F6 1191 aa1.62□□□□□ -2.15
COPB1-212ENST00000534771 MYOTQ9UBF9 498 aa1.62□□□□□ -2.15
COPB1-212ENST00000534771 RBPJLQ9UBG7 517 aa1.62□□□□□ -2.15
COPB1-212ENST00000534771 PCDHA2Q9Y5H9 948 aa1.62□□□□□ -2.15
COPB1-212ENST00000534771 SLC30A1Q9Y6M5 507 aa1.62□□□□□ -2.15
COPB1-212ENST00000534771 TMEM191CA6NGB0 347 aa1.61□□□□□ -2.15
COPB1-212ENST00000534771 H0Y858 1186 aa1.61□□□□□ -2.15
COPB1-212ENST00000534771 SLC27A2O14975 620 aa1.61□□□□□ -2.15
COPB1-212ENST00000534771 FOXN1O15353 648 aa1.61□□□□□ -2.15
COPB1-212ENST00000534771 MEFVO15553 781 aaPredicted RBP1.61□□□□□ -2.15
COPB1-212ENST00000534771 CPP00450 1065 aa1.61□□□□□ -2.15
COPB1-212ENST00000534771 ZNF888P0CJ79 500 aaPredicted RBP1.61□□□□□ -2.15
COPB1-212ENST00000534771 NAT2P11245 290 aa1.61□□□□□ -2.15
COPB1-212ENST00000534771 POLD1P28340 1107 aa1.61□□□□□ -2.15
COPB1-212ENST00000534771 RPS19P39019 145 aaKnown RBP1.61□□□□□ -2.15
COPB1-212ENST00000534771 ECI1P42126 302 aa1.61□□□□□ -2.15
COPB1-212ENST00000534771 GLRBP48167 497 aa1.61□□□□□ -2.15
COPB1-212ENST00000534771 GIPRP48546 466 aa1.61□□□□□ -2.15
COPB1-212ENST00000534771 ZNF143P52747 638 aaPredicted RBP1.61□□□□□ -2.15
COPB1-212ENST00000534771 EIF6P56537 245 aaKnown RBP1.61□□□□□ -2.15
COPB1-212ENST00000534771 PFKPQ01813 784 aa1.61□□□□□ -2.15
COPB1-212ENST00000534771 HHEXQ03014 270 aa1.61□□□□□ -2.15
COPB1-212ENST00000534771 CYP4F3Q08477 520 aa1.61□□□□□ -2.15
COPB1-212ENST00000534771 FOXL1Q12952 345 aa1.61□□□□□ -2.15
COPB1-212ENST00000534771 MRPL58Q14197 206 aaKnown RBP1.61□□□□□ -2.15
COPB1-212ENST00000534771 NOLC1Q14978 699 aaKnown RBP eCLIP1.61□□□□□ -2.15
COPB1-212ENST00000534771 SKIDA1Q1XH10 827 aa1.61□□□□□ -2.15
COPB1-212ENST00000534771 RNF151Q2KHN1 245 aa1.61□□□□□ -2.15
COPB1-212ENST00000534771 ZNF326Q5BKZ1 582 aaKnown RBP1.61□□□□□ -2.15
COPB1-212ENST00000534771 ZMAT1Q5H9K5 638 aa1.61□□□□□ -2.15
COPB1-212ENST00000534771 CYP4F22Q6NT55 531 aa1.61□□□□□ -2.15
COPB1-212ENST00000534771 VHLLQ6RSH7 139 aa1.61□□□□□ -2.15
COPB1-212ENST00000534771 CCDC81Q6ZN84 652 aa1.61□□□□□ -2.15
COPB1-212ENST00000534771 SGMS1Q86VZ5 419 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms