RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 MCPH1Q8NEM0 835 aa17.22■□□□□ 0.35
PPFIA1-222ENST00000532504 U2AF1L4Q8WU68 220 aaKnown RBP17.22■□□□□ 0.35
PPFIA1-222ENST00000532504 DDX12PQ92771 950 aa17.22■□□□□ 0.35
PPFIA1-222ENST00000532504 CCDC94Q9BW85 323 aaPredicted RBP17.22■□□□□ 0.35
PPFIA1-222ENST00000532504 WDR70Q9NW82 654 aa17.22■□□□□ 0.35
PPFIA1-222ENST00000532504 KIF28PB7ZC32 967 aa17.22■□□□□ 0.35
PPFIA1-222ENST00000532504 VCAM1P19320 739 aa17.22■□□□□ 0.35
PPFIA1-222ENST00000532504 USP11P51784 963 aa17.22■□□□□ 0.35
PPFIA1-222ENST00000532504 ADKP55263 362 aaKnown RBP17.22■□□□□ 0.35
PPFIA1-222ENST00000532504 RPS6P62753 249 aaKnown RBP17.22■□□□□ 0.35
PPFIA1-222ENST00000532504 SPATA1Q5VX52 437 aa17.22■□□□□ 0.35
PPFIA1-222ENST00000532504 P2RX5Q93086 422 aa17.22■□□□□ 0.35
PPFIA1-222ENST00000532504 RGL1Q9NZL6 768 aa17.22■□□□□ 0.35
PPFIA1-222ENST00000532504 SLC16A4O15374 487 aa17.22■□□□□ 0.35
PPFIA1-222ENST00000532504 PSMC5P62195 406 aa17.22■□□□□ 0.35
PPFIA1-222ENST00000532504 CERS5Q8N5B7 392 aa17.22■□□□□ 0.35
PPFIA1-222ENST00000532504 ANAPC4Q9UJX5 808 aa17.22■□□□□ 0.35
PPFIA1-222ENST00000532504 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.22■□□□□ 0.35
PPFIA1-222ENST00000532504 MMP14P50281 582 aa17.21■□□□□ 0.35
PPFIA1-222ENST00000532504 BCL9LQ86UU0 1499 aa17.21■□□□□ 0.35
PPFIA1-222ENST00000532504 CCDC114Q96M63 670 aa17.21■□□□□ 0.35
PPFIA1-222ENST00000532504 CTSHP09668 335 aa17.21■□□□□ 0.35
PPFIA1-222ENST00000532504 MAPK6Q16659 721 aa17.21■□□□□ 0.35
PPFIA1-222ENST00000532504 KMT5BQ4FZB7 885 aa17.21■□□□□ 0.35
PPFIA1-222ENST00000532504 TRPM4Q8TD43 1214 aa17.21■□□□□ 0.35
PPFIA1-222ENST00000532504 RPF1Q9H9Y2 349 aaKnown RBP17.21■□□□□ 0.35
PPFIA1-222ENST00000532504 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.21■□□□□ 0.35
PPFIA1-222ENST00000532504 EXOC3L4Q17RC7 722 aa17.21■□□□□ 0.35
PPFIA1-222ENST00000532504 TMCO3Q6UWJ1 677 aa17.21■□□□□ 0.35
PPFIA1-222ENST00000532504 MTRQ99707 1265 aa17.21■□□□□ 0.35
PPFIA1-222ENST00000532504 SALL1Q9NSC2 1324 aa17.21■□□□□ 0.35
PPFIA1-222ENST00000532504 GNASQ5JWF2 1037 aa17.21■□□□□ 0.35
PPFIA1-222ENST00000532504 TAAR1Q96RJ0 339 aa17.21■□□□□ 0.35
PPFIA1-222ENST00000532504 EIF2AK1Q9BQI3 630 aaKnown RBP17.21■□□□□ 0.35
PPFIA1-222ENST00000532504 SYNJ2BP-COX16A0A087WUM0 186 aa17.2■□□□□ 0.34
PPFIA1-222ENST00000532504 PTPREP23469 700 aa17.2■□□□□ 0.34
PPFIA1-222ENST00000532504 DPCR1Q3MIW9 517 aa17.2■□□□□ 0.34
PPFIA1-222ENST00000532504 MAP9Q49MG5 647 aa17.2■□□□□ 0.34
PPFIA1-222ENST00000532504 CHST13Q8NET6 341 aa17.2■□□□□ 0.34
PPFIA1-222ENST00000532504 COX16Q9P0S2 106 aa17.2■□□□□ 0.34
PPFIA1-222ENST00000532504 NALCNQ8IZF0 1738 aa17.2■□□□□ 0.34
PPFIA1-222ENST00000532504 PHKA2P46019 1235 aa17.2■□□□□ 0.34
PPFIA1-222ENST00000532504 SFR1Q86XK3 245 aa17.2■□□□□ 0.34
PPFIA1-222ENST00000532504 VGLL2Q8N8G2 317 aa17.2■□□□□ 0.34
PPFIA1-222ENST00000532504 MAN1B1Q9UKM7 699 aa17.2■□□□□ 0.34
PPFIA1-222ENST00000532504 PDHXO00330 501 aa17.2■□□□□ 0.34
PPFIA1-222ENST00000532504 CACTINQ8WUQ7 758 aaKnown RBP17.2■□□□□ 0.34
PPFIA1-222ENST00000532504 GDAQ9Y2T3 454 aa17.2■□□□□ 0.34
PPFIA1-222ENST00000532504 RARBP10826 455 aa17.2■□□□□ 0.34
PPFIA1-222ENST00000532504 METTL23Q86XA0 190 aa17.2■□□□□ 0.34
PPFIA1-222ENST00000532504 NT5C1BQ96P26 610 aa17.2■□□□□ 0.34
PPFIA1-222ENST00000532504 TUBGCP2Q9BSJ2 902 aa17.2■□□□□ 0.34
PPFIA1-222ENST00000532504 CTAGE15A4D2H0 777 aa17.19■□□□□ 0.34
PPFIA1-222ENST00000532504 TRPA1O75762 1119 aa17.19■□□□□ 0.34
PPFIA1-222ENST00000532504 CTAGE8P0CG41 777 aa17.19■□□□□ 0.34
PPFIA1-222ENST00000532504 FKBP3Q00688 224 aaKnown RBP17.19■□□□□ 0.34
PPFIA1-222ENST00000532504 CKAP4Q07065 602 aaKnown RBP17.19■□□□□ 0.34
PPFIA1-222ENST00000532504 PTPN21Q16825 1174 aa17.19■□□□□ 0.34
PPFIA1-222ENST00000532504 CRY2Q49AN0 593 aa17.19■□□□□ 0.34
PPFIA1-222ENST00000532504 SEL1L2Q5TEA6 688 aa17.19■□□□□ 0.34
PPFIA1-222ENST00000532504 SPECC1LQ69YQ0 1117 aa17.19■□□□□ 0.34
PPFIA1-222ENST00000532504 KCNV1Q6PIU1 500 aa17.19■□□□□ 0.34
PPFIA1-222ENST00000532504 CTAGE6Q86UF2 777 aa17.19■□□□□ 0.34
PPFIA1-222ENST00000532504 CTAGE4Q8IX94 777 aa17.19■□□□□ 0.34
PPFIA1-222ENST00000532504 SNX25Q9H3E2 840 aa17.19■□□□□ 0.34
PPFIA1-222ENST00000532504 PCDHB4Q9Y5E5 795 aa17.19■□□□□ 0.34
PPFIA1-222ENST00000532504 PFASO15067 1338 aa17.19■□□□□ 0.34
PPFIA1-222ENST00000532504 ZNF658Q5TYW1 1059 aaPredicted RBP17.19■□□□□ 0.34
PPFIA1-222ENST00000532504 SCYL2Q6P3W7 929 aa17.19■□□□□ 0.34
PPFIA1-222ENST00000532504 MOB2Q70IA6 237 aa17.19■□□□□ 0.34
PPFIA1-222ENST00000532504 GINM1Q9NU53 330 aa17.19■□□□□ 0.34
PPFIA1-222ENST00000532504 CUL4BQ13620 913 aa17.19■□□□□ 0.34
PPFIA1-222ENST00000532504 NOLC1Q14978 699 aaKnown RBP eCLIP17.19■□□□□ 0.34
PPFIA1-222ENST00000532504 DYDC1Q8WWB3 177 aa17.19■□□□□ 0.34
PPFIA1-222ENST00000532504 SCARA5Q6ZMJ2 495 aa17.19■□□□□ 0.34
PPFIA1-222ENST00000532504 POLR3FQ9H1D9 316 aaPredicted RBP17.19■□□□□ 0.34
PPFIA1-222ENST00000532504 EHD4Q9H223 541 aa17.19■□□□□ 0.34
PPFIA1-222ENST00000532504 CLDN3O15551 220 aa17.18■□□□□ 0.34
PPFIA1-222ENST00000532504 GH1P01241 217 aa17.18■□□□□ 0.34
PPFIA1-222ENST00000532504 PLEKHH3Q7Z736 793 aa17.18■□□□□ 0.34
PPFIA1-222ENST00000532504 PROM2Q8N271 834 aa17.18■□□□□ 0.34
PPFIA1-222ENST00000532504 DHTKD1Q96HY7 919 aaPredicted RBP17.18■□□□□ 0.34
PPFIA1-222ENST00000532504 MAD2L2Q9UI95 211 aa17.18■□□□□ 0.34
PPFIA1-222ENST00000532504 TTLL3Q9Y4R7 772 aa17.18■□□□□ 0.34
PPFIA1-222ENST00000532504 MYOM1P52179 1685 aa17.18■□□□□ 0.34
PPFIA1-222ENST00000532504 STXBP3O00186 592 aa17.18■□□□□ 0.34
PPFIA1-222ENST00000532504 SHMT1P34896 483 aa17.18■□□□□ 0.34
PPFIA1-222ENST00000532504 TMX2Q9Y320 296 aa17.18■□□□□ 0.34
PPFIA1-222ENST00000532504 IKBKGQ9Y6K9 419 aa17.18■□□□□ 0.34
PPFIA1-222ENST00000532504 CYP2C8P10632 490 aa17.18■□□□□ 0.34
PPFIA1-222ENST00000532504 CD58P19256 250 aa17.18■□□□□ 0.34
PPFIA1-222ENST00000532504 PDE6CP51160 858 aa17.18■□□□□ 0.34
PPFIA1-222ENST00000532504 TCRBV5S4A2TA0A5A2 114 aa17.18■□□□□ 0.34
PPFIA1-222ENST00000532504 LRRN2O75325 713 aa17.18■□□□□ 0.34
PPFIA1-222ENST00000532504 PPFIA1Q13136 1202 aa17.18■□□□□ 0.34
PPFIA1-222ENST00000532504 ZNF568Q3ZCX4 644 aa17.18■□□□□ 0.34
PPFIA1-222ENST00000532504 SYT10Q6XYQ8 523 aa17.18■□□□□ 0.34
PPFIA1-222ENST00000532504 TIGD1Q96MW7 591 aa17.18■□□□□ 0.34
PPFIA1-222ENST00000532504 PSMB7Q99436 277 aa17.18■□□□□ 0.34
PPFIA1-222ENST00000532504 SHTN1A0MZ66 631 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms