RNA–Protein interactions for RNA: ENST00000526527.1

COPB1-205, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-205ENST00000526527 RNF207Q6ZRF8 634 aa4.43□□□□□ -1.7
COPB1-205ENST00000526527 KBTBD2Q8IY47 623 aa4.43□□□□□ -1.7
COPB1-205ENST00000526527 KREMEN2Q8NCW0 462 aa4.43□□□□□ -1.7
COPB1-205ENST00000526527 RCBTB1Q8NDN9 531 aa4.43□□□□□ -1.7
COPB1-205ENST00000526527 PMFBP1Q8TBY8 1022 aa4.43□□□□□ -1.7
COPB1-205ENST00000526527 CLIC6Q96NY7 704 aa4.43□□□□□ -1.7
COPB1-205ENST00000526527 DNAJC2Q99543 621 aaKnown RBP4.43□□□□□ -1.7
COPB1-205ENST00000526527 ZFR2Q9UPR6 939 aaKnown RBP4.43□□□□□ -1.7
COPB1-205ENST00000526527 A0A087X1B8 175 aa4.42□□□□□ -1.7
COPB1-205ENST00000526527 TADA3O75528 432 aa4.42□□□□□ -1.7
COPB1-205ENST00000526527 LRG1P02750 347 aa4.42□□□□□ -1.7
COPB1-205ENST00000526527 ITGAVP06756 1048 aa4.42□□□□□ -1.7
COPB1-205ENST00000526527 SNRPB2P08579 225 aaKnown RBP4.42□□□□□ -1.7
COPB1-205ENST00000526527 LCP1P13796 627 aa4.42□□□□□ -1.7
COPB1-205ENST00000526527 HOXC12P31275 282 aa4.42□□□□□ -1.7
COPB1-205ENST00000526527 INHBCP55103 352 aa4.42□□□□□ -1.7
COPB1-205ENST00000526527 KCNAB2Q13303 367 aa4.42□□□□□ -1.7
COPB1-205ENST00000526527 SF1Q15637 639 aaKnown RBP4.42□□□□□ -1.7
COPB1-205ENST00000526527 PRSS53Q2L4Q9 553 aa4.42□□□□□ -1.7
COPB1-205ENST00000526527 HS1BP3Q53T59 392 aa4.42□□□□□ -1.7
COPB1-205ENST00000526527 STEAP3Q658P3 488 aa4.42□□□□□ -1.7
COPB1-205ENST00000526527 LRP10Q7Z4F1 713 aa4.42□□□□□ -1.7
COPB1-205ENST00000526527 FAM178BQ8IXR5 827 aa4.42□□□□□ -1.7
COPB1-205ENST00000526527 FAM9AQ8IZU1 332 aaPredicted RBP4.42□□□□□ -1.7
COPB1-205ENST00000526527 MKL1Q969V6 931 aa4.42□□□□□ -1.7
COPB1-205ENST00000526527 MRFAP1L1Q96HT8 127 aa4.42□□□□□ -1.7
COPB1-205ENST00000526527 PUS7Q96PZ0 661 aaKnown RBP4.42□□□□□ -1.7
COPB1-205ENST00000526527 OSBPL2Q9H1P3 480 aa4.42□□□□□ -1.7
COPB1-205ENST00000526527 PCDHB4Q9Y5E5 795 aa4.42□□□□□ -1.7
COPB1-205ENST00000526527 PCDHA2Q9Y5H9 948 aa4.42□□□□□ -1.7
COPB1-205ENST00000526527 LOC105371045A0A1W2PR82 267 aa4.41□□□□□ -1.7
COPB1-205ENST00000526527 H7BY64 318 aa4.41□□□□□ -1.7
COPB1-205ENST00000526527 CYP7B1O75881 506 aa4.41□□□□□ -1.7
COPB1-205ENST00000526527 APPP05067 770 aa4.41□□□□□ -1.7
COPB1-205ENST00000526527 SCG5P05408 212 aa4.41□□□□□ -1.7
COPB1-205ENST00000526527 RBL2Q08999 1139 aa4.41□□□□□ -1.7
COPB1-205ENST00000526527 CHRNA2Q15822 529 aa4.41□□□□□ -1.7
COPB1-205ENST00000526527 NRN1LQ496H8 165 aa4.41□□□□□ -1.7
COPB1-205ENST00000526527 EMC4Q5J8M3 183 aa4.41□□□□□ -1.7
COPB1-205ENST00000526527 ACBD5Q5T8D3 534 aaPredicted RBP4.41□□□□□ -1.7
COPB1-205ENST00000526527 DENND5AQ6IQ26 1287 aa4.41□□□□□ -1.7
COPB1-205ENST00000526527 C6orf15Q6UXA7 325 aaPredicted RBP4.41□□□□□ -1.7
COPB1-205ENST00000526527 TMC5Q6UXY8 1006 aa4.41□□□□□ -1.7
COPB1-205ENST00000526527 ZNF227Q86WZ6 799 aa4.41□□□□□ -1.7
COPB1-205ENST00000526527 PPIL6Q8IXY8 311 aa4.41□□□□□ -1.7
COPB1-205ENST00000526527 KLHL36Q8N4N3 616 aa4.41□□□□□ -1.7
COPB1-205ENST00000526527 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.41□□□□□ -1.7
COPB1-205ENST00000526527 ZNF669Q96BR6 464 aaPredicted RBP4.41□□□□□ -1.7
COPB1-205ENST00000526527 ZG16BQ96DA0 208 aa4.41□□□□□ -1.7
COPB1-205ENST00000526527 CHAMP1Q96JM3 812 aa4.41□□□□□ -1.7
COPB1-205ENST00000526527 SRPK1Q96SB4 655 aaKnown RBP4.41□□□□□ -1.7
COPB1-205ENST00000526527 TMEM209Q96SK2 561 aa4.41□□□□□ -1.7
COPB1-205ENST00000526527 LRP2BPQ9P2M1 347 aa4.41□□□□□ -1.7
COPB1-205ENST00000526527 RBPJLQ9UBG7 517 aa4.41□□□□□ -1.7
COPB1-205ENST00000526527 ZDHHC9Q9Y397 364 aa4.41□□□□□ -1.7
COPB1-205ENST00000526527 PLSCR1O15162 318 aa4.4□□□□□ -1.71
COPB1-205ENST00000526527 KLF4O43474 513 aa4.4□□□□□ -1.71
COPB1-205ENST00000526527 LMO1P25800 156 aa4.4□□□□□ -1.71
COPB1-205ENST00000526527 LTBRP36941 435 aa4.4□□□□□ -1.71
COPB1-205ENST00000526527 NFATC3Q12968 1075 aa4.4□□□□□ -1.71
COPB1-205ENST00000526527 LSAMPQ13449 338 aa4.4□□□□□ -1.71
COPB1-205ENST00000526527 TESK1Q15569 626 aa4.4□□□□□ -1.71
COPB1-205ENST00000526527 LSM12Q3MHD2 195 aaKnown RBP4.4□□□□□ -1.71
COPB1-205ENST00000526527 SV2CQ496J9 727 aa4.4□□□□□ -1.71
COPB1-205ENST00000526527 USP39Q53GS9 565 aaKnown RBP4.4□□□□□ -1.71
COPB1-205ENST00000526527 DPY19L2P1Q6NXN4 242 aa4.4□□□□□ -1.71
COPB1-205ENST00000526527 TRMT10BQ6PF06 316 aaKnown RBP4.4□□□□□ -1.71
COPB1-205ENST00000526527 SCUBE1Q8IWY4 988 aa4.4□□□□□ -1.71
COPB1-205ENST00000526527 LRRC47Q8N1G4 583 aaKnown RBP4.4□□□□□ -1.71
COPB1-205ENST00000526527 ST13P5Q8NFI4 369 aaPredicted RBP4.4□□□□□ -1.71
COPB1-205ENST00000526527 CRAMP1Q96RY5 1269 aa4.4□□□□□ -1.71
COPB1-205ENST00000526527 CSRNP2Q9H175 543 aa4.4□□□□□ -1.71
COPB1-205ENST00000526527 MEGF9Q9H1U4 602 aa4.4□□□□□ -1.71
COPB1-205ENST00000526527 CLDND1Q9NY35 253 aa4.4□□□□□ -1.71
COPB1-205ENST00000526527 BCCIPQ9P287 314 aaKnown RBP eCLIP4.4□□□□□ -1.71
COPB1-205ENST00000526527 MYOTQ9UBF9 498 aa4.4□□□□□ -1.71
COPB1-205ENST00000526527 FTSJ1Q9UET6 329 aa4.4□□□□□ -1.71
COPB1-205ENST00000526527 B2RBV5 119 aa4.39□□□□□ -1.71
COPB1-205ENST00000526527 PDPK1O15530 556 aa4.39□□□□□ -1.71
COPB1-205ENST00000526527 SUSD5O60279 629 aa4.39□□□□□ -1.71
COPB1-205ENST00000526527 DGKIO75912 1065 aa4.39□□□□□ -1.71
COPB1-205ENST00000526527 CPP00450 1065 aa4.39□□□□□ -1.71
COPB1-205ENST00000526527 COL6A1P12109 1028 aa4.39□□□□□ -1.71
COPB1-205ENST00000526527 KCNJ6P48051 423 aa4.39□□□□□ -1.71
COPB1-205ENST00000526527 GFRA1P56159 465 aa4.39□□□□□ -1.71
COPB1-205ENST00000526527 RASGRF1Q13972 1273 aa4.39□□□□□ -1.71
COPB1-205ENST00000526527 MTERF2Q49AM1 385 aa4.39□□□□□ -1.71
COPB1-205ENST00000526527 PHF19Q5T6S3 580 aa4.39□□□□□ -1.71
COPB1-205ENST00000526527 LRCH2Q5VUJ6 765 aa4.39□□□□□ -1.71
COPB1-205ENST00000526527 PROSER1Q86XN7 944 aa4.39□□□□□ -1.71
COPB1-205ENST00000526527 TMEM145Q8NBT3 493 aa4.39□□□□□ -1.71
COPB1-205ENST00000526527 NUDT10Q8NFP7 164 aa4.39□□□□□ -1.71
COPB1-205ENST00000526527 VOPP1Q96AW1 172 aa4.39□□□□□ -1.71
COPB1-205ENST00000526527 NUDT11Q96G61 164 aa4.39□□□□□ -1.71
COPB1-205ENST00000526527 IPO9Q96P70 1041 aaKnown RBP4.39□□□□□ -1.71
COPB1-205ENST00000526527 DEPDC7Q96QD5 511 aa4.39□□□□□ -1.71
COPB1-205ENST00000526527 WRNIP1Q96S55 665 aa4.39□□□□□ -1.71
COPB1-205ENST00000526527 CCDC113Q9H0I3 377 aa4.39□□□□□ -1.71
COPB1-205ENST00000526527 EPB41L1Q9H4G0 881 aa4.39□□□□□ -1.71
COPB1-205ENST00000526527 ZSWIM4Q9H7M6 989 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms