RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 IKBKEQ14164 716 aa12.45□□□□□ -0.42
PVT1-216ENST00000523068 TRIM71Q2Q1W2 868 aaKnown RBP12.45□□□□□ -0.42
PVT1-216ENST00000523068 ZNF618Q5T7W0 954 aa12.45□□□□□ -0.42
PVT1-216ENST00000523068 UTP14CQ5TAP6 766 aaKnown RBP12.45□□□□□ -0.42
PVT1-216ENST00000523068 MCTP2Q6DN12 878 aa12.45□□□□□ -0.42
PVT1-216ENST00000523068 TYW1BQ6NUM6 668 aa12.45□□□□□ -0.42
PVT1-216ENST00000523068 MXRA8Q9BRK3 442 aa12.45□□□□□ -0.42
PVT1-216ENST00000523068 ANO3Q9BYT9 981 aa12.45□□□□□ -0.42
PVT1-216ENST00000523068 AGXT2Q9BYV1 514 aa12.45□□□□□ -0.42
PVT1-216ENST00000523068 PRDM12Q9H4Q4 367 aa12.45□□□□□ -0.42
PVT1-216ENST00000523068 ERAP1Q9NZ08 941 aa12.45□□□□□ -0.42
PVT1-216ENST00000523068 UNC80Q8N2C7 3258 aa12.44□□□□□ -0.42
PVT1-216ENST00000523068 NRCAMQ92823 1304 aa12.44□□□□□ -0.42
PVT1-216ENST00000523068 ESYT2A0FGR8 921 aa12.44□□□□□ -0.42
PVT1-216ENST00000523068 TREHO43280 583 aa12.44□□□□□ -0.42
PVT1-216ENST00000523068 PRPF3O43395 683 aaKnown RBP12.44□□□□□ -0.42
PVT1-216ENST00000523068 ZNF76P36508 570 aa12.44□□□□□ -0.42
PVT1-216ENST00000523068 CLK2P49760 499 aaKnown RBP12.44□□□□□ -0.42
PVT1-216ENST00000523068 WDR5P61964 334 aaKnown RBP12.44□□□□□ -0.42
PVT1-216ENST00000523068 HIC1Q14526 733 aa12.44□□□□□ -0.42
PVT1-216ENST00000523068 GPNMBQ14956 572 aa12.44□□□□□ -0.42
PVT1-216ENST00000523068 CEP55Q53EZ4 464 aa12.44□□□□□ -0.42
PVT1-216ENST00000523068 RUFY3Q7L099 469 aa12.44□□□□□ -0.42
PVT1-216ENST00000523068 TRIM50Q86XT4 487 aa12.44□□□□□ -0.42
PVT1-216ENST00000523068 HERC6Q8IVU3 1022 aa12.44□□□□□ -0.42
PVT1-216ENST00000523068 GLG1Q92896 1179 aa12.44□□□□□ -0.42
PVT1-216ENST00000523068 TNPO1Q92973 898 aaKnown RBP12.44□□□□□ -0.42
PVT1-216ENST00000523068 WNT8BQ93098 351 aa12.44□□□□□ -0.42
PVT1-216ENST00000523068 SDF4Q9BRK5 362 aa12.44□□□□□ -0.42
PVT1-216ENST00000523068 SMARCAD1Q9H4L7 1026 aa12.44□□□□□ -0.42
PVT1-216ENST00000523068 C6orf50Q9HD87 102 aa12.44□□□□□ -0.42
PVT1-216ENST00000523068 JPH1Q9HDC5 661 aaPredicted RBP12.44□□□□□ -0.42
PVT1-216ENST00000523068 KCNH7Q9NS40 1196 aa12.44□□□□□ -0.42
PVT1-216ENST00000523068 SETD4Q9NVD3 440 aa12.44□□□□□ -0.42
PVT1-216ENST00000523068 PKD2L1Q9P0L9 805 aa12.44□□□□□ -0.42
PVT1-216ENST00000523068 CYP46A1Q9Y6A2 500 aa12.44□□□□□ -0.42
PVT1-216ENST00000523068 NFASCO94856 1347 aa12.43□□□□□ -0.42
PVT1-216ENST00000523068 GSTTP1A0A1W2PQM5 241 aa12.43□□□□□ -0.42
PVT1-216ENST00000523068 DLL1O00548 723 aa12.43□□□□□ -0.42
PVT1-216ENST00000523068 TLL1O43897 1013 aa12.43□□□□□ -0.42
PVT1-216ENST00000523068 LGR5O75473 907 aa12.43□□□□□ -0.42
PVT1-216ENST00000523068 CA3P07451 260 aa12.43□□□□□ -0.42
PVT1-216ENST00000523068 MYOGP15173 224 aa12.43□□□□□ -0.42
PVT1-216ENST00000523068 GNA11P29992 359 aa12.43□□□□□ -0.42
PVT1-216ENST00000523068 SREBF1P36956 1147 aa12.43□□□□□ -0.42
PVT1-216ENST00000523068 ARHGAP4P98171 946 aa12.43□□□□□ -0.42
PVT1-216ENST00000523068 TRAF7Q6Q0C0 670 aa12.43□□□□□ -0.42
PVT1-216ENST00000523068 BICD2Q8TD16 824 aa12.43□□□□□ -0.42
PVT1-216ENST00000523068 PGBD1Q96JS3 809 aa12.43□□□□□ -0.42
PVT1-216ENST00000523068 ZBED2Q9BTP6 218 aa12.43□□□□□ -0.42
PVT1-216ENST00000523068 RNF26Q9BY78 433 aaPredicted RBP12.43□□□□□ -0.42
PVT1-216ENST00000523068 ZMYND12Q9H0C1 365 aa12.43□□□□□ -0.42
PVT1-216ENST00000523068 SLC9A2Q9UBY0 812 aa12.43□□□□□ -0.42
PVT1-216ENST00000523068 MYH9P35579 1960 aaKnown RBP12.43□□□□□ -0.42
PVT1-216ENST00000523068 CHD9Q3L8U1 2897 aa12.43□□□□□ -0.42
PVT1-216ENST00000523068 MEIS1O00470 390 aa12.42□□□□□ -0.42
PVT1-216ENST00000523068 RPLP2P05387 115 aaKnown RBP12.42□□□□□ -0.42
PVT1-216ENST00000523068 IGFBP4P22692 258 aa12.42□□□□□ -0.42
PVT1-216ENST00000523068 EVCP57679 992 aa12.42□□□□□ -0.42
PVT1-216ENST00000523068 ADAM17P78536 824 aa12.42□□□□□ -0.42
PVT1-216ENST00000523068 TAF2Q6P1X5 1199 aa12.42□□□□□ -0.42
PVT1-216ENST00000523068 NIPA1Q7RTP0 329 aa12.42□□□□□ -0.42
PVT1-216ENST00000523068 RSPH3Q86UC2 560 aa12.42□□□□□ -0.42
PVT1-216ENST00000523068 CCDC148Q8NFR7 591 aa12.42□□□□□ -0.42
PVT1-216ENST00000523068 LMBR1Q8WVP7 490 aa12.42□□□□□ -0.42
PVT1-216ENST00000523068 PHKBQ93100 1093 aa12.42□□□□□ -0.42
PVT1-216ENST00000523068 TM6SF1Q9BZW5 370 aa12.42□□□□□ -0.42
PVT1-216ENST00000523068 AZI2Q9H6S1 392 aa12.42□□□□□ -0.42
PVT1-216ENST00000523068 ZSWIM6Q9HCJ5 1215 aa12.42□□□□□ -0.42
PVT1-216ENST00000523068 TELO2Q9Y4R8 837 aa12.42□□□□□ -0.42
PVT1-216ENST00000523068 SIP14410 1827 aa12.41□□□□□ -0.42
PVT1-216ENST00000523068 WDR81Q562E7 1941 aa12.41□□□□□ -0.42
PVT1-216ENST00000523068 ARP10275 920 aa12.41□□□□□ -0.42
PVT1-216ENST00000523068 IFNAR1P17181 557 aa12.41□□□□□ -0.42
PVT1-216ENST00000523068 MARK3P27448 753 aa12.41□□□□□ -0.42
PVT1-216ENST00000523068 PDIA3P30101 505 aaKnown RBP12.41□□□□□ -0.42
PVT1-216ENST00000523068 PPFIA1Q13136 1202 aa12.41□□□□□ -0.42
PVT1-216ENST00000523068 MBTPS1Q14703 1052 aa12.41□□□□□ -0.42
PVT1-216ENST00000523068 NTRK3Q16288 839 aa12.41□□□□□ -0.42
PVT1-216ENST00000523068 PKN1Q16512 942 aa12.41□□□□□ -0.42
PVT1-216ENST00000523068 PLEKHG4Q58EX7 1191 aa12.41□□□□□ -0.42
PVT1-216ENST00000523068 JAKMIP3Q5VZ66 844 aa12.41□□□□□ -0.42
PVT1-216ENST00000523068 RPAINQ86UA6 219 aa12.41□□□□□ -0.42
PVT1-216ENST00000523068 TRIM22Q8IYM9 498 aa12.41□□□□□ -0.42
PVT1-216ENST00000523068 REXO1Q8N1G1 1221 aaKnown RBP12.41□□□□□ -0.42
PVT1-216ENST00000523068 DBF4BQ8NFT6 615 aa12.41□□□□□ -0.42
PVT1-216ENST00000523068 CYP2W1Q8TAV3 490 aa12.41□□□□□ -0.42
PVT1-216ENST00000523068 SEPT8Q92599 483 aa12.41□□□□□ -0.42
PVT1-216ENST00000523068 APBB2Q92870 758 aa12.41□□□□□ -0.42
PVT1-216ENST00000523068 SLC26A6Q9BXS9 759 aa12.41□□□□□ -0.42
PVT1-216ENST00000523068 AGO4Q9HCK5 861 aaKnown RBP12.41□□□□□ -0.42
PVT1-216ENST00000523068 TMEM260Q9NX78 707 aa12.41□□□□□ -0.42
PVT1-216ENST00000523068 TUBE1Q9UJT0 475 aa12.41□□□□□ -0.42
PVT1-216ENST00000523068 LOXHD1Q8IVV2 1947 aa12.41□□□□□ -0.42
PVT1-216ENST00000523068 RRN3P2A6NIE6 340 aa12.4□□□□□ -0.42
PVT1-216ENST00000523068 GJB5O95377 273 aa12.4□□□□□ -0.42
PVT1-216ENST00000523068 AMHP03971 560 aa12.4□□□□□ -0.42
PVT1-216ENST00000523068 CYP3A4P08684 503 aa12.4□□□□□ -0.42
PVT1-216ENST00000523068 CTSHP09668 335 aa12.4□□□□□ -0.42
PVT1-216ENST00000523068 SLC26A2P50443 739 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms