RNA–Protein interactions for RNA: ENST00000502908.2

SCARB2-203, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-203ENST00000502908 CENPHQ9H3R5 247 aa20.47■□□□□ 0.87
SCARB2-203ENST00000502908 BCAS3Q9H6U6 928 aa20.47■□□□□ 0.87
SCARB2-203ENST00000502908 MYH4Q9Y623 1939 aa20.47■□□□□ 0.87
SCARB2-203ENST00000502908 POTEFA5A3E0 1075 aa20.47■□□□□ 0.87
SCARB2-203ENST00000502908 MEIS1O00470 390 aa20.47■□□□□ 0.87
SCARB2-203ENST00000502908 MPHOSPH10O00566 681 aaKnown RBP20.47■□□□□ 0.87
SCARB2-203ENST00000502908 KCNK3O14649 394 aa20.47■□□□□ 0.87
SCARB2-203ENST00000502908 KRT18P05783 430 aaKnown RBP20.47■□□□□ 0.87
SCARB2-203ENST00000502908 POTEIP0CG38 1075 aa20.47■□□□□ 0.87
SCARB2-203ENST00000502908 POTEGQ6S5H5 508 aa20.47■□□□□ 0.87
SCARB2-203ENST00000502908 POTEEQ6S8J3 1075 aa20.47■□□□□ 0.87
SCARB2-203ENST00000502908 CERS3Q8IU89 383 aa20.47■□□□□ 0.87
SCARB2-203ENST00000502908 COL24A1Q17RW2 1714 aa20.47■□□□□ 0.87
SCARB2-203ENST00000502908 NDUFAB1O14561 156 aa20.46■□□□□ 0.87
SCARB2-203ENST00000502908 RFC4P35249 363 aa20.46■□□□□ 0.87
SCARB2-203ENST00000502908 NT5C2P49902 561 aa20.46■□□□□ 0.87
SCARB2-203ENST00000502908 PTK2Q05397 1052 aa20.46■□□□□ 0.87
SCARB2-203ENST00000502908 KCNH2Q12809 1159 aa20.46■□□□□ 0.87
SCARB2-203ENST00000502908 ORC2Q13416 577 aaPredicted RBP20.46■□□□□ 0.87
SCARB2-203ENST00000502908 DDX42Q86XP3 938 aaKnown RBP eCLIP20.46■□□□□ 0.87
SCARB2-203ENST00000502908 KAT2BQ92831 832 aa20.46■□□□□ 0.87
SCARB2-203ENST00000502908 INPP4AQ96PE3 977 aaPredicted RBP20.46■□□□□ 0.87
SCARB2-203ENST00000502908 DDX4Q9NQI0 724 aaKnown RBP20.46■□□□□ 0.87
SCARB2-203ENST00000502908 EMILIN3Q9NT22 766 aa20.46■□□□□ 0.87
SCARB2-203ENST00000502908 PCDHA2Q9Y5H9 948 aa20.46■□□□□ 0.87
SCARB2-203ENST00000502908 SMARCA1P28370 1054 aa20.46■□□□□ 0.87
SCARB2-203ENST00000502908 ASIC2Q16515 512 aa20.46■□□□□ 0.87
SCARB2-203ENST00000502908 ASPRV1Q53RT3 343 aa20.46■□□□□ 0.87
SCARB2-203ENST00000502908 IQCKQ8N0W5 287 aa20.46■□□□□ 0.87
SCARB2-203ENST00000502908 RPGRQ92834 1020 aaKnown RBP20.46■□□□□ 0.87
SCARB2-203ENST00000502908 AP1M1Q9BXS5 423 aa20.46■□□□□ 0.87
SCARB2-203ENST00000502908 BMP2KQ9NSY1 1161 aaPredicted RBP20.46■□□□□ 0.87
SCARB2-203ENST00000502908 DAGLAQ9Y4D2 1042 aa20.46■□□□□ 0.87
SCARB2-203ENST00000502908 PNMA6FA0A0J9YX94 578 aa20.45■□□□□ 0.86
SCARB2-203ENST00000502908 PAK2Q13177 524 aa20.45■□□□□ 0.86
SCARB2-203ENST00000502908 HLTFQ14527 1009 aaKnown RBP eCLIP20.45■□□□□ 0.86
SCARB2-203ENST00000502908 SHROOM1Q2M3G4 852 aaPredicted RBP20.45■□□□□ 0.86
SCARB2-203ENST00000502908 GBP6Q6ZN66 633 aa20.45■□□□□ 0.86
SCARB2-203ENST00000502908 BARGINQ6ZT62 677 aa20.45■□□□□ 0.86
SCARB2-203ENST00000502908 OR2W6PQ8NHA6 318 aa20.45■□□□□ 0.86
SCARB2-203ENST00000502908 CUL5Q93034 780 aa20.45■□□□□ 0.86
SCARB2-203ENST00000502908 MXD3Q9BW11 206 aa20.45■□□□□ 0.86
SCARB2-203ENST00000502908 KCTD10Q9H3F6 313 aa20.45■□□□□ 0.86
SCARB2-203ENST00000502908 MED24O75448 989 aa20.45■□□□□ 0.86
SCARB2-203ENST00000502908 EPB41P11171 864 aaKnown RBP20.45■□□□□ 0.86
SCARB2-203ENST00000502908 NR2F2P24468 414 aa20.45■□□□□ 0.86
SCARB2-203ENST00000502908 TNFRSF8P28908 595 aa20.45■□□□□ 0.86
SCARB2-203ENST00000502908 ZNF543Q08ER8 600 aa20.45■□□□□ 0.86
SCARB2-203ENST00000502908 PPP4R3AQ6IN85 833 aa20.45■□□□□ 0.86
SCARB2-203ENST00000502908 MAATS1Q7Z4T9 603 aa20.45■□□□□ 0.86
SCARB2-203ENST00000502908 RUBCNQ92622 972 aa20.45■□□□□ 0.86
SCARB2-203ENST00000502908 GANQ9H2C0 597 aa20.45■□□□□ 0.86
SCARB2-203ENST00000502908 PSTPIP2Q9H939 334 aa20.45■□□□□ 0.86
SCARB2-203ENST00000502908 RIMBP2O15034 1052 aa20.44■□□□□ 0.86
SCARB2-203ENST00000502908 TAL1P17542 331 aaPredicted RBP20.44■□□□□ 0.86
SCARB2-203ENST00000502908 CYP11B2P19099 503 aa20.44■□□□□ 0.86
SCARB2-203ENST00000502908 CLK2P49760 499 aaKnown RBP20.44■□□□□ 0.86
SCARB2-203ENST00000502908 SNAP25P60880 206 aa20.44■□□□□ 0.86
SCARB2-203ENST00000502908 PSMC6P62333 389 aa20.44■□□□□ 0.86
SCARB2-203ENST00000502908 GTF2IP78347 998 aa20.44■□□□□ 0.86
SCARB2-203ENST00000502908 ZNF571Q7Z3V5 609 aaPredicted RBP20.44■□□□□ 0.86
SCARB2-203ENST00000502908 CCDC65Q8IXS2 484 aa20.44■□□□□ 0.86
SCARB2-203ENST00000502908 EDEM3Q9BZQ6 932 aa20.44■□□□□ 0.86
SCARB2-203ENST00000502908 LRRC27Q9C0I9 530 aa20.44■□□□□ 0.86
SCARB2-203ENST00000502908 FAM107BQ9H098 131 aa20.44■□□□□ 0.86
SCARB2-203ENST00000502908 POLLQ9UGP5 575 aa20.44■□□□□ 0.86
SCARB2-203ENST00000502908 TSKSQ9UJT2 592 aa20.44■□□□□ 0.86
SCARB2-203ENST00000502908 PCDHGC5Q9Y5F6 944 aa20.44■□□□□ 0.86
SCARB2-203ENST00000502908 A0A087WUV0 522 aaPredicted RBP20.44■□□□□ 0.86
SCARB2-203ENST00000502908 HPDP32754 393 aaPredicted RBP20.44■□□□□ 0.86
SCARB2-203ENST00000502908 SEC24CP53992 1094 aa20.44■□□□□ 0.86
SCARB2-203ENST00000502908 GLE1Q53GS7 698 aaKnown RBP20.44■□□□□ 0.86
SCARB2-203ENST00000502908 ARSHQ5FYA8 562 aa20.44■□□□□ 0.86
SCARB2-203ENST00000502908 DCAF17Q5H9S7 520 aaPredicted RBP20.44■□□□□ 0.86
SCARB2-203ENST00000502908 FBXW10Q5XX13 1052 aa20.44■□□□□ 0.86
SCARB2-203ENST00000502908 GGA1Q9UJY5 639 aa20.44■□□□□ 0.86
SCARB2-203ENST00000502908 C6orf229H3BNL8 230 aa20.43■□□□□ 0.86
SCARB2-203ENST00000502908 ERLIN2O94905 339 aa20.43■□□□□ 0.86
SCARB2-203ENST00000502908 PLCG2P16885 1265 aa20.43■□□□□ 0.86
SCARB2-203ENST00000502908 NOVP48745 357 aa20.43■□□□□ 0.86
SCARB2-203ENST00000502908 USP38Q8NB14 1042 aa20.43■□□□□ 0.86
SCARB2-203ENST00000502908 ARFGEF1Q9Y6D6 1849 aa20.43■□□□□ 0.86
SCARB2-203ENST00000502908 FAM196BA6NMK8 535 aa20.43■□□□□ 0.86
SCARB2-203ENST00000502908 SKOR1P84550 965 aa20.43■□□□□ 0.86
SCARB2-203ENST00000502908 GJB7Q6PEY0 223 aa20.43■□□□□ 0.86
SCARB2-203ENST00000502908 SPAG5Q96R06 1193 aa20.43■□□□□ 0.86
SCARB2-203ENST00000502908 IKZF4Q9H2S9 585 aa20.43■□□□□ 0.86
SCARB2-203ENST00000502908 AJAP1Q9UKB5 411 aaPredicted RBP20.43■□□□□ 0.86
SCARB2-203ENST00000502908 HDAC9Q9UKV0 1011 aa20.43■□□□□ 0.86
SCARB2-203ENST00000502908 PLAAQ9Y263 795 aa20.43■□□□□ 0.86
SCARB2-203ENST00000502908 hCG_1984214I3L0E3 225 aa20.42■□□□□ 0.86
SCARB2-203ENST00000502908 CEP104O60308 925 aa20.42■□□□□ 0.86
SCARB2-203ENST00000502908 TTLL1O95922 423 aa20.42■□□□□ 0.86
SCARB2-203ENST00000502908 SNHG28P0DPA3 235 aa20.42■□□□□ 0.86
SCARB2-203ENST00000502908 ERVK-9P63128 1117 aa20.42■□□□□ 0.86
SCARB2-203ENST00000502908 PABPC4Q13310 644 aaKnown RBP eCLIP20.42■□□□□ 0.86
SCARB2-203ENST00000502908 CEP85LQ5SZL2 805 aa20.42■□□□□ 0.86
SCARB2-203ENST00000502908 ZNF713Q8N859 430 aaPredicted RBP20.42■□□□□ 0.86
SCARB2-203ENST00000502908 SYN2Q92777 582 aaPredicted RBP20.42■□□□□ 0.86
SCARB2-203ENST00000502908 CEP63Q96MT8 703 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms