RNA–Protein interactions for RNA: ENST00000496360.5

MACF1-223, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 2,080 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-223ENST00000496360 BLMHQ13867 455 aa16.41■□□□□ 0.22
MACF1-223ENST00000496360 SCARF1Q14162 830 aa16.41■□□□□ 0.22
MACF1-223ENST00000496360 ACCSLQ4AC99 568 aa16.41■□□□□ 0.22
MACF1-223ENST00000496360 NKX2-3Q8TAU0 364 aa16.41■□□□□ 0.22
MACF1-223ENST00000496360 C7orf43Q8WVR3 580 aa16.41■□□□□ 0.22
MACF1-223ENST00000496360 SYN2Q92777 582 aaPredicted RBP16.41■□□□□ 0.22
MACF1-223ENST00000496360 XPO6Q96QU8 1125 aaKnown RBP16.41■□□□□ 0.22
MACF1-223ENST00000496360 KRT12Q99456 494 aa16.41■□□□□ 0.22
MACF1-223ENST00000496360 DUSP9Q99956 384 aaKnown RBP16.41■□□□□ 0.22
MACF1-223ENST00000496360 FER1L6Q2WGJ9 1857 aa16.41■□□□□ 0.22
MACF1-223ENST00000496360 OPLAHO14841 1288 aa16.41■□□□□ 0.22
MACF1-223ENST00000496360 ZNF131P52739 623 aa16.41■□□□□ 0.22
MACF1-223ENST00000496360 ZNF174Q15697 407 aa16.41■□□□□ 0.22
MACF1-223ENST00000496360 MIIPQ5JXC2 388 aa16.41■□□□□ 0.22
MACF1-223ENST00000496360 SLC10A5Q5PT55 438 aa16.41■□□□□ 0.22
MACF1-223ENST00000496360 TYW1BQ6NUM6 668 aa16.41■□□□□ 0.22
MACF1-223ENST00000496360 KRT26Q7Z3Y9 468 aa16.41■□□□□ 0.22
MACF1-223ENST00000496360 IFNL3Q8IZI9 196 aa16.41■□□□□ 0.22
MACF1-223ENST00000496360 GBP7Q8N8V2 638 aaPredicted RBP16.41■□□□□ 0.22
MACF1-223ENST00000496360 USP38Q8NB14 1042 aa16.41■□□□□ 0.22
MACF1-223ENST00000496360 STAMQ92783 540 aa16.41■□□□□ 0.22
MACF1-223ENST00000496360 RPGRQ92834 1020 aaKnown RBP16.41■□□□□ 0.22
MACF1-223ENST00000496360 PSMD1Q99460 953 aa16.41■□□□□ 0.22
MACF1-223ENST00000496360 NSRP1Q9H0G5 558 aaKnown RBP16.41■□□□□ 0.22
MACF1-223ENST00000496360 LTBP3Q9NS15 1303 aa16.4■□□□□ 0.22
MACF1-223ENST00000496360 FGFR1OPO95684 399 aaKnown RBP16.4■□□□□ 0.22
MACF1-223ENST00000496360 CALM1P0DP23 149 aa16.4■□□□□ 0.22
MACF1-223ENST00000496360 CALM2P0DP24 149 aa16.4■□□□□ 0.22
MACF1-223ENST00000496360 CALM3P0DP25 149 aa16.4■□□□□ 0.22
MACF1-223ENST00000496360 ASTE1Q2TB18 679 aaPredicted RBP16.4■□□□□ 0.22
MACF1-223ENST00000496360 MEI1Q5TIA1 1274 aa16.4■□□□□ 0.22
MACF1-223ENST00000496360 PIGWQ7Z7B1 504 aa16.4■□□□□ 0.22
MACF1-223ENST00000496360 HOOK3Q86VS8 718 aa16.4■□□□□ 0.22
MACF1-223ENST00000496360 MFN1Q8IWA4 741 aa16.4■□□□□ 0.22
MACF1-223ENST00000496360 ITFG2Q969R8 447 aa16.4■□□□□ 0.22
MACF1-223ENST00000496360 TLCD1Q96CP7 247 aa16.4■□□□□ 0.22
MACF1-223ENST00000496360 PBKQ96KB5 322 aa16.4■□□□□ 0.22
MACF1-223ENST00000496360 ISCA1Q9BUE6 129 aa16.4■□□□□ 0.22
MACF1-223ENST00000496360 CCDC134Q9H6E4 229 aa16.4■□□□□ 0.22
MACF1-223ENST00000496360 DISC1Q9NRI5 854 aa16.4■□□□□ 0.22
MACF1-223ENST00000496360 PCDHGC5Q9Y5F6 944 aa16.4■□□□□ 0.22
MACF1-223ENST00000496360 KLRC4O43908 158 aa16.39■□□□□ 0.21
MACF1-223ENST00000496360 ECM2O94769 699 aaPredicted RBP16.39■□□□□ 0.21
MACF1-223ENST00000496360 UQCRFS1P1P0C7P4 283 aa16.39■□□□□ 0.21
MACF1-223ENST00000496360 NEFHP12036 1026 aa16.39■□□□□ 0.21
MACF1-223ENST00000496360 IBSPP21815 317 aaPredicted RBP16.39■□□□□ 0.21
MACF1-223ENST00000496360 HOXA10P31260 410 aaPredicted RBP16.39■□□□□ 0.21
MACF1-223ENST00000496360 PMS1P54277 932 aaKnown RBP16.39■□□□□ 0.21
MACF1-223ENST00000496360 HLTFQ14527 1009 aaKnown RBP eCLIP16.39■□□□□ 0.21
MACF1-223ENST00000496360 PKN1Q16512 942 aa16.39■□□□□ 0.21
MACF1-223ENST00000496360 TBC1D31Q96DN5 1066 aa16.39■□□□□ 0.21
MACF1-223ENST00000496360 ZNF594Q96JF6 807 aaPredicted RBP16.39■□□□□ 0.21
MACF1-223ENST00000496360 NLRP3Q96P20 1036 aa16.39■□□□□ 0.21
MACF1-223ENST00000496360 PUS3Q9BZE2 481 aaKnown RBP16.39■□□□□ 0.21
MACF1-223ENST00000496360 NACAP1Q9BZK3 213 aa16.39■□□□□ 0.21
MACF1-223ENST00000496360 TMX4Q9H1E5 349 aaPredicted RBP16.39■□□□□ 0.21
MACF1-223ENST00000496360 TAOK3Q9H2K8 898 aa16.39■□□□□ 0.21
MACF1-223ENST00000496360 TRMT112Q9UI30 125 aaKnown RBP16.39■□□□□ 0.21
MACF1-223ENST00000496360 SIK3Q9Y2K2 1263 aa16.39■□□□□ 0.21
MACF1-223ENST00000496360 ZNF532Q9HCE3 1301 aa16.39■□□□□ 0.21
MACF1-223ENST00000496360 TCRBV5S4A2TA0A5A2 114 aa16.39■□□□□ 0.21
MACF1-223ENST00000496360 BTNL10A8MVZ5 291 aa16.39■□□□□ 0.21
MACF1-223ENST00000496360 CCDC188H7C350 402 aa16.39■□□□□ 0.21
MACF1-223ENST00000496360 RAD51CO43502 376 aa16.39■□□□□ 0.21
MACF1-223ENST00000496360 FLOT1O75955 427 aa16.39■□□□□ 0.21
MACF1-223ENST00000496360 PDE6AP16499 860 aa16.39■□□□□ 0.21
MACF1-223ENST00000496360 C1QTNF8P60827 252 aa16.39■□□□□ 0.21
MACF1-223ENST00000496360 MRPS25P82663 173 aaKnown RBP16.39■□□□□ 0.21
MACF1-223ENST00000496360 NAB2Q15742 525 aa16.39■□□□□ 0.21
MACF1-223ENST00000496360 UAP1Q16222 522 aaPredicted RBP16.39■□□□□ 0.21
MACF1-223ENST00000496360 C3orf67Q6ZVT6 689 aa16.39■□□□□ 0.21
MACF1-223ENST00000496360 DHX37Q8IY37 1157 aaKnown RBP16.39■□□□□ 0.21
MACF1-223ENST00000496360 TAF4BQ92750 862 aa16.39■□□□□ 0.21
MACF1-223ENST00000496360 PLCD4Q9BRC7 762 aa16.39■□□□□ 0.21
MACF1-223ENST00000496360 KCNMB3Q9NPA1 279 aa16.39■□□□□ 0.21
MACF1-223ENST00000496360 SLC5A4Q9NY91 659 aa16.39■□□□□ 0.21
MACF1-223ENST00000496360 SMARCAL1Q9NZC9 954 aa16.39■□□□□ 0.21
MACF1-223ENST00000496360 EHD2Q9NZN4 543 aa16.39■□□□□ 0.21
MACF1-223ENST00000496360 SAMD15Q9P1V8 674 aa16.39■□□□□ 0.21
MACF1-223ENST00000496360 ESYT3A0FGR9 886 aa16.38■□□□□ 0.21
MACF1-223ENST00000496360 FAM205CA6NFA0 338 aa16.38■□□□□ 0.21
MACF1-223ENST00000496360 A6NHS1 94 aa16.38■□□□□ 0.21
MACF1-223ENST00000496360 F8W031 263 aaPredicted RBP16.38■□□□□ 0.21
MACF1-223ENST00000496360 NCK2O43639 380 aa16.38■□□□□ 0.21
MACF1-223ENST00000496360 WFS1O76024 890 aa16.38■□□□□ 0.21
MACF1-223ENST00000496360 FERP16591 822 aa16.38■□□□□ 0.21
MACF1-223ENST00000496360 MCAMP43121 646 aa16.38■□□□□ 0.21
MACF1-223ENST00000496360 CMPK2Q5EBM0 449 aa16.38■□□□□ 0.21
MACF1-223ENST00000496360 MTMR8Q96EF0 704 aa16.38■□□□□ 0.21
MACF1-223ENST00000496360 THOC1Q96FV9 657 aaKnown RBP16.38■□□□□ 0.21
MACF1-223ENST00000496360 PLA2G12BQ9BX93 195 aa16.38■□□□□ 0.21
MACF1-223ENST00000496360 NOVA2Q9UNW9 492 aaKnown RBP16.38■□□□□ 0.21
MACF1-223ENST00000496360 MYH6P13533 1939 aa16.38■□□□□ 0.21
MACF1-223ENST00000496360 CCDC88AQ3V6T2 1871 aa16.38■□□□□ 0.21
MACF1-223ENST00000496360 TMOD1P28289 359 aa16.38■□□□□ 0.21
MACF1-223ENST00000496360 ECHS1P30084 290 aa16.38■□□□□ 0.21
MACF1-223ENST00000496360 EARS2Q5JPH6 523 aaKnown RBP16.38■□□□□ 0.21
MACF1-223ENST00000496360 FOXR2Q6PJQ5 311 aa16.38■□□□□ 0.21
MACF1-223ENST00000496360 ACTRT1Q8TDG2 376 aa16.38■□□□□ 0.21
MACF1-223ENST00000496360 RBM17Q96I25 401 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms