RNA–Protein interactions for RNA: ENST00000474339.1

RNF25-205, Transcript of ring finger protein 25, human

TSL 2

Gene RNF25, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF25-205	ENST00000474339	ZNF200	P98182	395 aa	Predicted RBP	13.74	□□□□□ -0.21
RNF25-205	ENST00000474339	SP4	Q02446	784 aa		13.74	□□□□□ -0.21
RNF25-205	ENST00000474339	APOBR	Q0VD83	1088 aa		13.74	□□□□□ -0.21
RNF25-205	ENST00000474339	UTP14C	Q5TAP6	766 aa	Known RBP	13.74	□□□□□ -0.21
RNF25-205	ENST00000474339	NIPA1	Q7RTP0	329 aa		13.74	□□□□□ -0.21
RNF25-205	ENST00000474339	RPAIN	Q86UA6	219 aa		13.74	□□□□□ -0.21
RNF25-205	ENST00000474339	RSPH3	Q86UC2	560 aa		13.74	□□□□□ -0.21
RNF25-205	ENST00000474339	BICD2	Q8TD16	824 aa		13.74	□□□□□ -0.21
RNF25-205	ENST00000474339	GLG1	Q92896	1179 aa		13.74	□□□□□ -0.21
RNF25-205	ENST00000474339	ZBED2	Q9BTP6	218 aa		13.74	□□□□□ -0.21
RNF25-205	ENST00000474339	AZI2	Q9H6S1	392 aa		13.74	□□□□□ -0.21
RNF25-205	ENST00000474339	JPH1	Q9HDC5	661 aa	Predicted RBP	13.74	□□□□□ -0.21
RNF25-205	ENST00000474339	KCNH7	Q9NS40	1196 aa		13.74	□□□□□ -0.21
RNF25-205	ENST00000474339	SETD4	Q9NVD3	440 aa		13.74	□□□□□ -0.21
RNF25-205	ENST00000474339	TANC1	Q9C0D5	1861 aa		13.74	□□□□□ -0.21
RNF25-205	ENST00000474339	NID2	Q14112	1375 aa		13.73	□□□□□ -0.21
RNF25-205	ENST00000474339	GSTTP1	A0A1W2PQM5	241 aa		13.73	□□□□□ -0.21
RNF25-205	ENST00000474339	TREH	O43280	583 aa		13.73	□□□□□ -0.21
RNF25-205	ENST00000474339	TLL1	O43897	1013 aa		13.73	□□□□□ -0.21
RNF25-205	ENST00000474339	CA3	P07451	260 aa		13.73	□□□□□ -0.21
RNF25-205	ENST00000474339	ZNF76	P36508	570 aa		13.73	□□□□□ -0.21
RNF25-205	ENST00000474339	SREBF1	P36956	1147 aa		13.73	□□□□□ -0.21
RNF25-205	ENST00000474339	CLK2	P49760	499 aa	Known RBP	13.73	□□□□□ -0.21
RNF25-205	ENST00000474339	SLC26A2	P50443	739 aa		13.73	□□□□□ -0.21
RNF25-205	ENST00000474339	WDR5	P61964	334 aa	Known RBP	13.73	□□□□□ -0.21
RNF25-205	ENST00000474339	HIC1	Q14526	733 aa		13.73	□□□□□ -0.21
RNF25-205	ENST00000474339	TYW1B	Q6NUM6	668 aa		13.73	□□□□□ -0.21
RNF25-205	ENST00000474339	TRAF7	Q6Q0C0	670 aa		13.73	□□□□□ -0.21
RNF25-205	ENST00000474339	RUFY3	Q7L099	469 aa		13.73	□□□□□ -0.21
RNF25-205	ENST00000474339	SEPT8	Q92599	483 aa		13.73	□□□□□ -0.21
RNF25-205	ENST00000474339	SYMPK	Q92797	1274 aa	Known RBP	13.73	□□□□□ -0.21
RNF25-205	ENST00000474339	ANO3	Q9BYT9	981 aa		13.73	□□□□□ -0.21
RNF25-205	ENST00000474339	ZMYND12	Q9H0C1	365 aa		13.73	□□□□□ -0.21
RNF25-205	ENST00000474339	TSPYL2	Q9H2G4	693 aa	Predicted RBP	13.73	□□□□□ -0.21
RNF25-205	ENST00000474339	SLC9A2	Q9UBY0	812 aa		13.73	□□□□□ -0.21
RNF25-205	ENST00000474339	CYP46A1	Q9Y6A2	500 aa		13.73	□□□□□ -0.21
RNF25-205	ENST00000474339	RRN3P2	A6NIE6	340 aa		13.72	□□□□□ -0.21
RNF25-205	ENST00000474339	MEIS1	O00470	390 aa		13.72	□□□□□ -0.21
RNF25-205	ENST00000474339	AMH	P03971	560 aa		13.72	□□□□□ -0.21
RNF25-205	ENST00000474339	CPA1	P15085	419 aa		13.72	□□□□□ -0.21
RNF25-205	ENST00000474339	MYOG	P15173	224 aa		13.72	□□□□□ -0.21
RNF25-205	ENST00000474339	POU3F3	P20264	500 aa	Predicted RBP	13.72	□□□□□ -0.21
RNF25-205	ENST00000474339	IGFBP4	P22692	258 aa		13.72	□□□□□ -0.21
RNF25-205	ENST00000474339	ADAM17	P78536	824 aa		13.72	□□□□□ -0.21
RNF25-205	ENST00000474339	ARHGAP4	P98171	946 aa		13.72	□□□□□ -0.21
RNF25-205	ENST00000474339	FAM43B	Q6ZT52	329 aa	Predicted RBP	13.72	□□□□□ -0.21
RNF25-205	ENST00000474339	PLPPR4	Q7Z2D5	763 aa		13.72	□□□□□ -0.21
RNF25-205	ENST00000474339	CCDC148	Q8NFR7	591 aa		13.72	□□□□□ -0.21
RNF25-205	ENST00000474339	APBB2	Q92870	758 aa		13.72	□□□□□ -0.21
RNF25-205	ENST00000474339	WNT8B	Q93098	351 aa		13.72	□□□□□ -0.21
RNF25-205	ENST00000474339	RAD9A	Q99638	391 aa		13.72	□□□□□ -0.21
RNF25-205	ENST00000474339	RNF26	Q9BY78	433 aa	Predicted RBP	13.72	□□□□□ -0.21
RNF25-205	ENST00000474339	TM6SF1	Q9BZW5	370 aa		13.72	□□□□□ -0.21
RNF25-205	ENST00000474339	ZSWIM6	Q9HCJ5	1215 aa		13.72	□□□□□ -0.21
RNF25-205	ENST00000474339	PPP4R2	Q9NY27	417 aa		13.72	□□□□□ -0.21
RNF25-205	ENST00000474339	TRIP12	Q14669	1992 aa	Predicted RBP	13.72	□□□□□ -0.21
RNF25-205	ENST00000474339	CHD9	Q3L8U1	2897 aa		13.72	□□□□□ -0.21
RNF25-205	ENST00000474339	SCN5A	Q14524	2016 aa		13.71	□□□□□ -0.21
RNF25-205	ENST00000474339	GTPBP6	O43824	516 aa	Predicted RBP	13.71	□□□□□ -0.21
RNF25-205	ENST00000474339	GJB5	O95377	273 aa		13.71	□□□□□ -0.21
RNF25-205	ENST00000474339	CYP3A4	P08684	503 aa		13.71	□□□□□ -0.21
RNF25-205	ENST00000474339	IFNAR1	P17181	557 aa		13.71	□□□□□ -0.21
RNF25-205	ENST00000474339	PPFIA1	Q13136	1202 aa		13.71	□□□□□ -0.21
RNF25-205	ENST00000474339	PLEKHG4	Q58EX7	1191 aa		13.71	□□□□□ -0.21
RNF25-205	ENST00000474339	FAM26D	Q5JW98	314 aa		13.71	□□□□□ -0.21
RNF25-205	ENST00000474339	TRIM50	Q86XT4	487 aa		13.71	□□□□□ -0.21
RNF25-205	ENST00000474339	TRIM22	Q8IYM9	498 aa		13.71	□□□□□ -0.21
RNF25-205	ENST00000474339	FAM177A1	Q8N128	213 aa	Predicted RBP	13.71	□□□□□ -0.21
RNF25-205	ENST00000474339	REXO1	Q8N1G1	1221 aa	Known RBP	13.71	□□□□□ -0.21
RNF25-205	ENST00000474339	LMBR1	Q8WVP7	490 aa		13.71	□□□□□ -0.21
RNF25-205	ENST00000474339	AGO4	Q9HCK5	861 aa	Known RBP	13.71	□□□□□ -0.21
RNF25-205	ENST00000474339	SH3GLB2	Q9NR46	395 aa		13.71	□□□□□ -0.21
RNF25-205	ENST00000474339	INSL6	Q9Y581	213 aa		13.71	□□□□□ -0.21
RNF25-205	ENST00000474339	MBLAC1	A4D2B0	266 aa	Predicted RBP	13.7	□□□□□ -0.22
RNF25-205	ENST00000474339	PDIA3	P30101	505 aa	Known RBP	13.7	□□□□□ -0.22
RNF25-205	ENST00000474339	STAT5B	P51692	787 aa		13.7	□□□□□ -0.22
RNF25-205	ENST00000474339	ACTR2	P61160	394 aa		13.7	□□□□□ -0.22
RNF25-205	ENST00000474339	SET	Q01105	290 aa	Predicted RBP	13.7	□□□□□ -0.22
RNF25-205	ENST00000474339	TAP1	Q03518	808 aa		13.7	□□□□□ -0.22
RNF25-205	ENST00000474339	MBTPS1	Q14703	1052 aa		13.7	□□□□□ -0.22
RNF25-205	ENST00000474339	GRIK4	Q16099	956 aa		13.7	□□□□□ -0.22
RNF25-205	ENST00000474339	CPLX2	Q6PUV4	134 aa	Known RBP	13.7	□□□□□ -0.22
RNF25-205	ENST00000474339	DBF4B	Q8NFT6	615 aa		13.7	□□□□□ -0.22
RNF25-205	ENST00000474339	CYP2W1	Q8TAV3	490 aa		13.7	□□□□□ -0.22
RNF25-205	ENST00000474339	ZNF274	Q96GC6	653 aa	Predicted RBP	13.7	□□□□□ -0.22
RNF25-205	ENST00000474339	TBC1D22B	Q9NU19	505 aa		13.7	□□□□□ -0.22
RNF25-205	ENST00000474339	PKD2L1	Q9P0L9	805 aa		13.7	□□□□□ -0.22
RNF25-205	ENST00000474339	TUBE1	Q9UJT0	475 aa		13.7	□□□□□ -0.22
RNF25-205	ENST00000474339	ATG7	O95352	703 aa		13.69	□□□□□ -0.22
RNF25-205	ENST00000474339	AR	P10275	920 aa		13.69	□□□□□ -0.22
RNF25-205	ENST00000474339	ADGRE1	Q14246	886 aa		13.69	□□□□□ -0.22
RNF25-205	ENST00000474339	NTRK3	Q16288	839 aa		13.69	□□□□□ -0.22
RNF25-205	ENST00000474339	PKN1	Q16512	942 aa		13.69	□□□□□ -0.22
RNF25-205	ENST00000474339	IER5	Q5VY09	327 aa		13.69	□□□□□ -0.22
RNF25-205	ENST00000474339	JAKMIP3	Q5VZ66	844 aa		13.69	□□□□□ -0.22
RNF25-205	ENST00000474339	FAM160B1	Q5W0V3	765 aa		13.69	□□□□□ -0.22
RNF25-205	ENST00000474339	PLA2G4D	Q86XP0	818 aa		13.69	□□□□□ -0.22
RNF25-205	ENST00000474339	ATXN2L	Q8WWM7	1075 aa	Known RBP	13.69	□□□□□ -0.22
RNF25-205	ENST00000474339	C22orf23	Q9BZE7	217 aa		13.69	□□□□□ -0.22
RNF25-205	ENST00000474339	TMEM260	Q9NX78	707 aa		13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms