RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 AFG1LQ8WV93 481 aa7.99□□□□□ -1.13
HDAC3-206ENST00000471968 APBB2Q92870 758 aa7.99□□□□□ -1.13
HDAC3-206ENST00000471968 TSR2Q969E8 191 aaKnown RBP7.99□□□□□ -1.13
HDAC3-206ENST00000471968 KIFC2Q96AC6 838 aa7.99□□□□□ -1.13
HDAC3-206ENST00000471968 UBL7Q96S82 380 aaPredicted RBP7.99□□□□□ -1.13
HDAC3-206ENST00000471968 GPR20Q99678 358 aa7.99□□□□□ -1.13
HDAC3-206ENST00000471968 SRCIN1Q9C0H9 1055 aa7.99□□□□□ -1.13
HDAC3-206ENST00000471968 GOPCQ9HD26 462 aa7.99□□□□□ -1.13
HDAC3-206ENST00000471968 KLK13Q9UKR3 277 aa7.99□□□□□ -1.13
HDAC3-206ENST00000471968 MSRB2Q9Y3D2 182 aa7.99□□□□□ -1.13
HDAC3-206ENST00000471968 IL16Q14005 1332 aa7.99□□□□□ -1.13
HDAC3-206ENST00000471968 PLXNA4Q9HCM2 1894 aa7.98□□□□□ -1.13
HDAC3-206ENST00000471968 NBPF19A0A087WUL8 3843 aa7.98□□□□□ -1.13
HDAC3-206ENST00000471968 TK2O00142 265 aa7.98□□□□□ -1.13
HDAC3-206ENST00000471968 NKRFO15226 690 aaKnown RBP eCLIP7.98□□□□□ -1.13
HDAC3-206ENST00000471968 POLR3DP05423 398 aaPredicted RBP7.98□□□□□ -1.13
HDAC3-206ENST00000471968 EEF2P13639 858 aaKnown RBP7.98□□□□□ -1.13
HDAC3-206ENST00000471968 KCNC4Q03721 635 aa7.98□□□□□ -1.13
HDAC3-206ENST00000471968 GABPAQ06546 454 aa7.98□□□□□ -1.13
HDAC3-206ENST00000471968 UBXN2BQ14CS0 331 aa7.98□□□□□ -1.13
HDAC3-206ENST00000471968 NONOQ15233 471 aaKnown RBP eCLIP7.98□□□□□ -1.13
HDAC3-206ENST00000471968 PDE12Q6L8Q7 609 aaKnown RBP7.98□□□□□ -1.13
HDAC3-206ENST00000471968 CCDC149Q6ZUS6 474 aa7.98□□□□□ -1.13
HDAC3-206ENST00000471968 DHX37Q8IY37 1157 aaKnown RBP7.98□□□□□ -1.13
HDAC3-206ENST00000471968 SLC44A3Q8N4M1 653 aa7.98□□□□□ -1.13
HDAC3-206ENST00000471968 PRPF38AQ8NAV1 312 aaKnown RBP7.98□□□□□ -1.13
HDAC3-206ENST00000471968 FEZF2Q8TBJ5 459 aa7.98□□□□□ -1.13
HDAC3-206ENST00000471968 XAGE2Q96GT9 111 aa7.98□□□□□ -1.13
HDAC3-206ENST00000471968 TCF25Q9BQ70 676 aa7.98□□□□□ -1.13
HDAC3-206ENST00000471968 FAM126AQ9BYI3 521 aaPredicted RBP7.98□□□□□ -1.13
HDAC3-206ENST00000471968 SLC38A10Q9HBR0 1119 aa7.98□□□□□ -1.13
HDAC3-206ENST00000471968 ENTPD7Q9NQZ7 604 aa7.98□□□□□ -1.13
HDAC3-206ENST00000471968 TMEM260Q9NX78 707 aa7.98□□□□□ -1.13
HDAC3-206ENST00000471968 MTF2Q9Y483 593 aaPredicted RBP7.98□□□□□ -1.13
HDAC3-206ENST00000471968 C2CD3Q4AC94 2353 aa7.98□□□□□ -1.13
HDAC3-206ENST00000471968 FRMPD2Q68DX3 1309 aaPredicted RBP7.98□□□□□ -1.13
HDAC3-206ENST00000471968 MYH1P12882 1939 aa7.97□□□□□ -1.13
HDAC3-206ENST00000471968 FBN2P35556 2912 aa7.97□□□□□ -1.13
HDAC3-206ENST00000471968 PATJQ8NI35 1801 aa7.97□□□□□ -1.13
HDAC3-206ENST00000471968 KIAA1671Q9BY89 1806 aa7.97□□□□□ -1.13
HDAC3-206ENST00000471968 KANSL1LA0AUZ9 987 aa7.97□□□□□ -1.13
HDAC3-206ENST00000471968 RBM47A0AV96 593 aaKnown RBP7.97□□□□□ -1.13
HDAC3-206ENST00000471968 FGF18O76093 207 aa7.97□□□□□ -1.13
HDAC3-206ENST00000471968 CAPNS1P04632 268 aa7.97□□□□□ -1.13
HDAC3-206ENST00000471968 AKR1B1P15121 316 aa7.97□□□□□ -1.13
HDAC3-206ENST00000471968 STARD6P59095 220 aa7.97□□□□□ -1.13
HDAC3-206ENST00000471968 HIC1Q14526 733 aa7.97□□□□□ -1.13
HDAC3-206ENST00000471968 MVPQ14764 893 aaKnown RBP7.97□□□□□ -1.13
HDAC3-206ENST00000471968 PTPN14Q15678 1187 aa7.97□□□□□ -1.13
HDAC3-206ENST00000471968 SPOUT1Q5T280 376 aaKnown RBP7.97□□□□□ -1.13
HDAC3-206ENST00000471968 SH3PXD2AQ5TCZ1 1133 aa7.97□□□□□ -1.13
HDAC3-206ENST00000471968 LRRC47Q8N1G4 583 aaKnown RBP7.97□□□□□ -1.13
HDAC3-206ENST00000471968 MORC4Q8TE76 937 aa7.97□□□□□ -1.13
HDAC3-206ENST00000471968 SHDQ96IW2 340 aa7.97□□□□□ -1.13
HDAC3-206ENST00000471968 PRMT8Q9NR22 394 aaPredicted RBP7.97□□□□□ -1.13
HDAC3-206ENST00000471968 RNF146Q9NTX7 359 aa7.97□□□□□ -1.13
HDAC3-206ENST00000471968 PCDHB12Q9Y5F1 795 aa7.97□□□□□ -1.13
HDAC3-206ENST00000471968 RALGAPA1Q6GYQ0 2036 aa7.96□□□□□ -1.13
HDAC3-206ENST00000471968 FAM170BA6NMN3 283 aa7.96□□□□□ -1.14
HDAC3-206ENST00000471968 ENPP3O14638 875 aa7.96□□□□□ -1.14
HDAC3-206ENST00000471968 CIAO1O76071 339 aa7.96□□□□□ -1.14
HDAC3-206ENST00000471968 TXNP10599 105 aaKnown RBP7.96□□□□□ -1.14
HDAC3-206ENST00000471968 CASTP20810 708 aaKnown RBP7.96□□□□□ -1.14
HDAC3-206ENST00000471968 PSEN2P49810 448 aa7.96□□□□□ -1.14
HDAC3-206ENST00000471968 NRLP54845 237 aa7.96□□□□□ -1.14
HDAC3-206ENST00000471968 MFSD10Q14728 455 aa7.96□□□□□ -1.14
HDAC3-206ENST00000471968 KIAA0753Q2KHM9 967 aa7.96□□□□□ -1.14
HDAC3-206ENST00000471968 RNF43Q68DV7 783 aa7.96□□□□□ -1.14
HDAC3-206ENST00000471968 TMC5Q6UXY8 1006 aa7.96□□□□□ -1.14
HDAC3-206ENST00000471968 SERINC5Q86VE9 423 aa7.96□□□□□ -1.14
HDAC3-206ENST00000471968 THNSL1Q8IYQ7 743 aa7.96□□□□□ -1.14
HDAC3-206ENST00000471968 MIGA1Q8NAN2 632 aa7.96□□□□□ -1.14
HDAC3-206ENST00000471968 CRELD1Q96HD1 420 aa7.96□□□□□ -1.14
HDAC3-206ENST00000471968 TREHO43280 583 aa7.95□□□□□ -1.14
HDAC3-206ENST00000471968 MAGEA9P43362 315 aa7.95□□□□□ -1.14
HDAC3-206ENST00000471968 GATMP50440 423 aa7.95□□□□□ -1.14
HDAC3-206ENST00000471968 OAZ1P54368 228 aa7.95□□□□□ -1.14
HDAC3-206ENST00000471968 SRSF5Q13243 272 aaKnown RBP7.95□□□□□ -1.14
HDAC3-206ENST00000471968 SNW1Q13573 536 aaKnown RBP7.95□□□□□ -1.14
HDAC3-206ENST00000471968 ZNF513Q8N8E2 541 aaPredicted RBP7.95□□□□□ -1.14
HDAC3-206ENST00000471968 SCFD2Q8WU76 684 aa7.95□□□□□ -1.14
HDAC3-206ENST00000471968 KATNAL1Q9BW62 490 aa7.95□□□□□ -1.14
HDAC3-206ENST00000471968 ARRDC1-AS1Q9H2J1 176 aa7.95□□□□□ -1.14
HDAC3-206ENST00000471968 CYP39A1Q9NYL5 469 aa7.95□□□□□ -1.14
HDAC3-206ENST00000471968 ACACAQ13085 2346 aa7.95□□□□□ -1.14
HDAC3-206ENST00000471968 CREBBPQ92793 2442 aa7.94□□□□□ -1.14
HDAC3-206ENST00000471968 MIA3Q5JRA6 1907 aa7.94□□□□□ -1.14
HDAC3-206ENST00000471968 APC2O95996 2303 aa7.94□□□□□ -1.14
HDAC3-206ENST00000471968 ENO4A6NNW6 628 aa7.94□□□□□ -1.14
HDAC3-206ENST00000471968 F5H6K3 240 aa7.94□□□□□ -1.14
HDAC3-206ENST00000471968 ATXN7O15265 892 aaPredicted RBP7.94□□□□□ -1.14
HDAC3-206ENST00000471968 N4BP1O75113 896 aaKnown RBP7.94□□□□□ -1.14
HDAC3-206ENST00000471968 ARIH2O95376 493 aa7.94□□□□□ -1.14
HDAC3-206ENST00000471968 ZNF806P0C7X5 589 aa7.94□□□□□ -1.14
HDAC3-206ENST00000471968 ZNF286BP0CG31 522 aa7.94□□□□□ -1.14
HDAC3-206ENST00000471968 GBP2P32456 591 aaPredicted RBP7.94□□□□□ -1.14
HDAC3-206ENST00000471968 IL15P40933 162 aaPredicted RBP7.94□□□□□ -1.14
HDAC3-206ENST00000471968 CCR10P46092 362 aa7.94□□□□□ -1.14
HDAC3-206ENST00000471968 ALDH5A1P51649 535 aaPredicted RBP7.94□□□□□ -1.14
HDAC3-206ENST00000471968 SCAPQ12770 1279 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 171 ms