RNA–Protein interactions for RNA: ENST00000464012.1

CCHCR1-210, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-210ENST00000464012 GSTTP1A0A1W2PQM5 241 aa22.02■■□□□ 1.12
CCHCR1-210ENST00000464012 CXCL10P02778 98 aa22.02■■□□□ 1.12
CCHCR1-210ENST00000464012 CTSHP09668 335 aa22.02■■□□□ 1.12
CCHCR1-210ENST00000464012 CLK2P49760 499 aaKnown RBP22.02■■□□□ 1.12
CCHCR1-210ENST00000464012 WDR5P61964 334 aaKnown RBP22.02■■□□□ 1.12
CCHCR1-210ENST00000464012 CCT2P78371 535 aaKnown RBP22.02■■□□□ 1.12
CCHCR1-210ENST00000464012 AP3B2Q13367 1082 aa22.02■■□□□ 1.12
CCHCR1-210ENST00000464012 MBTPS1Q14703 1052 aa22.02■■□□□ 1.12
CCHCR1-210ENST00000464012 TMCO2Q7Z6W1 182 aaPredicted RBP22.02■■□□□ 1.12
CCHCR1-210ENST00000464012 HERC6Q8IVU3 1022 aa22.02■■□□□ 1.12
CCHCR1-210ENST00000464012 LMBR1Q8WVP7 490 aa22.02■■□□□ 1.12
CCHCR1-210ENST00000464012 PPM1EQ8WY54 764 aa22.02■■□□□ 1.12
CCHCR1-210ENST00000464012 SEPT1Q8WYJ6 367 aa22.02■■□□□ 1.12
CCHCR1-210ENST00000464012 NCOA5Q9HCD5 579 aaKnown RBP22.02■■□□□ 1.12
CCHCR1-210ENST00000464012 KCNH7Q9NS40 1196 aa22.02■■□□□ 1.12
CCHCR1-210ENST00000464012 COL4A4P53420 1690 aaPredicted RBP22.01■■□□□ 1.11
CCHCR1-210ENST00000464012 RSPH10B2B2RC85 870 aa22.01■■□□□ 1.11
CCHCR1-210ENST00000464012 RSPH10BP0C881 870 aa22.01■■□□□ 1.11
CCHCR1-210ENST00000464012 GNAT1P11488 350 aa22.01■■□□□ 1.11
CCHCR1-210ENST00000464012 ZNF76P36508 570 aa22.01■■□□□ 1.11
CCHCR1-210ENST00000464012 DEFB103AP81534 67 aa22.01■■□□□ 1.11
CCHCR1-210ENST00000464012 AKAP17AQ02040 695 aaKnown RBP22.01■■□□□ 1.11
CCHCR1-210ENST00000464012 RUFY3Q7L099 469 aa22.01■■□□□ 1.11
CCHCR1-210ENST00000464012 PHOSPHO2Q8TCD6 241 aa22.01■■□□□ 1.11
CCHCR1-210ENST00000464012 GLG1Q92896 1179 aa22.01■■□□□ 1.11
CCHCR1-210ENST00000464012 SLC26A6Q9BXS9 759 aa22.01■■□□□ 1.11
CCHCR1-210ENST00000464012 GLT8D2Q9H1C3 349 aa22.01■■□□□ 1.11
CCHCR1-210ENST00000464012 JPH1Q9HDC5 661 aaPredicted RBP22.01■■□□□ 1.11
CCHCR1-210ENST00000464012 SLC9A2Q9UBY0 812 aa22.01■■□□□ 1.11
CCHCR1-210ENST00000464012 EYSQ5T1H1 3165 aa22.01■■□□□ 1.11
CCHCR1-210ENST00000464012 MAFGO15525 162 aa22■■□□□ 1.11
CCHCR1-210ENST00000464012 PRPF3O43395 683 aaKnown RBP22■■□□□ 1.11
CCHCR1-210ENST00000464012 ARP10275 920 aa22■■□□□ 1.11
CCHCR1-210ENST00000464012 IGFBP4P22692 258 aa22■■□□□ 1.11
CCHCR1-210ENST00000464012 SREBF1P36956 1147 aa22■■□□□ 1.11
CCHCR1-210ENST00000464012 TOB2Q14106 344 aaPredicted RBP22■■□□□ 1.11
CCHCR1-210ENST00000464012 PKN1Q16512 942 aa22■■□□□ 1.11
CCHCR1-210ENST00000464012 FBXL16Q8N461 479 aa22■■□□□ 1.11
CCHCR1-210ENST00000464012 USP38Q8NB14 1042 aa22■■□□□ 1.11
CCHCR1-210ENST00000464012 SDF4Q9BRK5 362 aa22■■□□□ 1.11
CCHCR1-210ENST00000464012 UPF3BQ9BZI7 483 aaKnown RBP22■■□□□ 1.11
CCHCR1-210ENST00000464012 CERS4Q9HA82 394 aa22■■□□□ 1.11
CCHCR1-210ENST00000464012 CYP46A1Q9Y6A2 500 aa22■■□□□ 1.11
CCHCR1-210ENST00000464012 KIF28PB7ZC32 967 aa21.99■■□□□ 1.11
CCHCR1-210ENST00000464012 DLL1O00548 723 aa21.99■■□□□ 1.11
CCHCR1-210ENST00000464012 ADAMTS3O15072 1205 aa21.99■■□□□ 1.11
CCHCR1-210ENST00000464012 EPB41L2O43491 1005 aaKnown RBP21.99■■□□□ 1.11
CCHCR1-210ENST00000464012 TLL1O43897 1013 aa21.99■■□□□ 1.11
CCHCR1-210ENST00000464012 LGR5O75473 907 aa21.99■■□□□ 1.11
CCHCR1-210ENST00000464012 PDIA3P30101 505 aaKnown RBP21.99■■□□□ 1.11
CCHCR1-210ENST00000464012 ADGRE1Q14246 886 aa21.99■■□□□ 1.11
CCHCR1-210ENST00000464012 CEP55Q53EZ4 464 aa21.99■■□□□ 1.11
CCHCR1-210ENST00000464012 TEX2Q8IWB9 1127 aa21.99■■□□□ 1.11
CCHCR1-210ENST00000464012 CCDC12Q8WUD4 166 aaPredicted RBP21.99■■□□□ 1.11
CCHCR1-210ENST00000464012 LARP6Q9BRS8 491 aaKnown RBP21.99■■□□□ 1.11
CCHCR1-210ENST00000464012 ZSWIM6Q9HCJ5 1215 aa21.99■■□□□ 1.11
CCHCR1-210ENST00000464012 C6orf50Q9HD87 102 aa21.99■■□□□ 1.11
CCHCR1-210ENST00000464012 ERAP1Q9NZ08 941 aa21.99■■□□□ 1.11
CCHCR1-210ENST00000464012 EMSYQ7Z589 1322 aa21.99■■□□□ 1.11
CCHCR1-210ENST00000464012 CHD9Q3L8U1 2897 aa21.98■■□□□ 1.11
CCHCR1-210ENST00000464012 LOXHD1Q8IVV2 1947 aa21.98■■□□□ 1.11
CCHCR1-210ENST00000464012 DDX39AO00148 427 aaKnown RBP21.98■■□□□ 1.11
CCHCR1-210ENST00000464012 PPFIA1Q13136 1202 aa21.98■■□□□ 1.11
CCHCR1-210ENST00000464012 IKBKEQ14164 716 aa21.98■■□□□ 1.11
CCHCR1-210ENST00000464012 NTRK3Q16288 839 aa21.98■■□□□ 1.11
CCHCR1-210ENST00000464012 UIMC1Q96RL1 719 aa21.98■■□□□ 1.11
CCHCR1-210ENST00000464012 ZBED2Q9BTP6 218 aa21.98■■□□□ 1.11
CCHCR1-210ENST00000464012 RNF26Q9BY78 433 aaPredicted RBP21.98■■□□□ 1.11
CCHCR1-210ENST00000464012 ZMYND12Q9H0C1 365 aa21.98■■□□□ 1.11
CCHCR1-210ENST00000464012 SMARCAD1Q9H4L7 1026 aa21.98■■□□□ 1.11
CCHCR1-210ENST00000464012 AGO4Q9HCK5 861 aaKnown RBP21.98■■□□□ 1.11
CCHCR1-210ENST00000464012 NRCAMQ92823 1304 aa21.98■■□□□ 1.11
CCHCR1-210ENST00000464012 ABHD14A-ACY1A0A1B0GW23 586 aa21.97■■□□□ 1.11
CCHCR1-210ENST00000464012 ESYT2A0FGR8 921 aa21.97■■□□□ 1.11
CCHCR1-210ENST00000464012 ARHGEF15O94989 841 aa21.97■■□□□ 1.11
CCHCR1-210ENST00000464012 IGBP1P78318 339 aa21.97■■□□□ 1.11
CCHCR1-210ENST00000464012 ADAM17P78536 824 aa21.97■■□□□ 1.11
CCHCR1-210ENST00000464012 ITGB3BPQ13352 177 aaPredicted RBP21.97■■□□□ 1.11
CCHCR1-210ENST00000464012 GRIK4Q16099 956 aa21.97■■□□□ 1.11
CCHCR1-210ENST00000464012 FAM117BQ6P1L5 589 aa21.97■■□□□ 1.11
CCHCR1-210ENST00000464012 RUFY4Q6ZNE9 571 aa21.97■■□□□ 1.11
CCHCR1-210ENST00000464012 REXO1Q8N1G1 1221 aaKnown RBP21.97■■□□□ 1.11
CCHCR1-210ENST00000464012 DBF4BQ8NFT6 615 aa21.97■■□□□ 1.11
CCHCR1-210ENST00000464012 NFASCO94856 1347 aa21.97■■□□□ 1.11
CCHCR1-210ENST00000464012 WDR81Q562E7 1941 aa21.96■■□□□ 1.11
CCHCR1-210ENST00000464012 MYH9P35579 1960 aaKnown RBP21.96■■□□□ 1.11
CCHCR1-210ENST00000464012 IFNAR1P17181 557 aa21.96■■□□□ 1.11
CCHCR1-210ENST00000464012 ACTR2P61160 394 aa21.96■■□□□ 1.11
CCHCR1-210ENST00000464012 STK3Q13188 491 aa21.96■■□□□ 1.11
CCHCR1-210ENST00000464012 CCDC85BQ15834 202 aaPredicted RBP21.96■■□□□ 1.11
CCHCR1-210ENST00000464012 PLA2G4DQ86XP0 818 aa21.96■■□□□ 1.11
CCHCR1-210ENST00000464012 MICALL1Q8N3F8 863 aa21.96■■□□□ 1.11
CCHCR1-210ENST00000464012 RASGRP4Q8TDF6 673 aa21.96■■□□□ 1.11
CCHCR1-210ENST00000464012 PCYT2Q99447 389 aa21.96■■□□□ 1.11
CCHCR1-210ENST00000464012 OSBPL7Q9BZF2 842 aa21.96■■□□□ 1.11
CCHCR1-210ENST00000464012 AZI2Q9H6S1 392 aa21.96■■□□□ 1.11
CCHCR1-210ENST00000464012 VPS54Q9P1Q0 977 aa21.96■■□□□ 1.11
CCHCR1-210ENST00000464012 TUBE1Q9UJT0 475 aa21.96■■□□□ 1.11
CCHCR1-210ENST00000464012 LCHNA4D1U4 455 aa21.95■■□□□ 1.1
CCHCR1-210ENST00000464012 FAM86B1E9PN63 330 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms