RNA–Protein interactions for RNA: ENST00000455279.6

CCHCR1-209, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 676 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-209ENST00000455279 ATP2A2P16615 1042 aaKnown RBP23.25■■□□□ 1.31
CCHCR1-209ENST00000455279 RFC2P35250 354 aa23.25■■□□□ 1.31
CCHCR1-209ENST00000455279 SREBF1P36956 1147 aa23.25■■□□□ 1.31
CCHCR1-209ENST00000455279 ADAM17P78536 824 aa23.25■■□□□ 1.31
CCHCR1-209ENST00000455279 STK3Q13188 491 aa23.25■■□□□ 1.31
CCHCR1-209ENST00000455279 ZNF713Q8N859 430 aaPredicted RBP23.25■■□□□ 1.31
CCHCR1-209ENST00000455279 CRYGNQ8WXF5 182 aa23.25■■□□□ 1.31
CCHCR1-209ENST00000455279 PRDM12Q9H4Q4 367 aa23.25■■□□□ 1.31
CCHCR1-209ENST00000455279 VPS54Q9P1Q0 977 aa23.25■■□□□ 1.31
CCHCR1-209ENST00000455279 TMEM265A0A087WTH1 108 aa23.24■■□□□ 1.31
CCHCR1-209ENST00000455279 CXCL10P02778 98 aa23.24■■□□□ 1.31
CCHCR1-209ENST00000455279 THPOP40225 353 aa23.24■■□□□ 1.31
CCHCR1-209ENST00000455279 DEFB103AP81534 67 aa23.24■■□□□ 1.31
CCHCR1-209ENST00000455279 RUFY4Q6ZNE9 571 aa23.24■■□□□ 1.31
CCHCR1-209ENST00000455279 CCDC155Q8N6L0 562 aa23.24■■□□□ 1.31
CCHCR1-209ENST00000455279 USP38Q8NB14 1042 aa23.24■■□□□ 1.31
CCHCR1-209ENST00000455279 SLC17A8Q8NDX2 589 aa23.24■■□□□ 1.31
CCHCR1-209ENST00000455279 LMBR1Q8WVP7 490 aa23.24■■□□□ 1.31
CCHCR1-209ENST00000455279 AIFM3Q96NN9 605 aa23.24■■□□□ 1.31
CCHCR1-209ENST00000455279 ZMYND12Q9H0C1 365 aa23.24■■□□□ 1.31
CCHCR1-209ENST00000455279 AGO4Q9HCK5 861 aaKnown RBP23.24■■□□□ 1.31
CCHCR1-209ENST00000455279 CYP46A1Q9Y6A2 500 aa23.24■■□□□ 1.31
CCHCR1-209ENST00000455279 CCDC196A0A1B0GTZ2 297 aa23.23■■□□□ 1.31
CCHCR1-209ENST00000455279 EPB41L2O43491 1005 aaKnown RBP23.23■■□□□ 1.31
CCHCR1-209ENST00000455279 CTSHP09668 335 aa23.23■■□□□ 1.31
CCHCR1-209ENST00000455279 IFNAR1P17181 557 aa23.23■■□□□ 1.31
CCHCR1-209ENST00000455279 ARHGAP4P98171 946 aa23.23■■□□□ 1.31
CCHCR1-209ENST00000455279 ADGRE1Q14246 886 aa23.23■■□□□ 1.31
CCHCR1-209ENST00000455279 SEPT1Q8WYJ6 367 aa23.23■■□□□ 1.31
CCHCR1-209ENST00000455279 MTIF3Q9H2K0 278 aaKnown RBP23.23■■□□□ 1.31
CCHCR1-209ENST00000455279 SIP14410 1827 aa23.23■■□□□ 1.31
CCHCR1-209ENST00000455279 ESYT2A0FGR8 921 aa23.22■■□□□ 1.31
CCHCR1-209ENST00000455279 DDX39AO00148 427 aaKnown RBP23.22■■□□□ 1.31
CCHCR1-209ENST00000455279 SEC24BO95487 1268 aa23.22■■□□□ 1.31
CCHCR1-209ENST00000455279 CCNE2O96020 404 aa23.22■■□□□ 1.31
CCHCR1-209ENST00000455279 FOSL2P15408 326 aa23.22■■□□□ 1.31
CCHCR1-209ENST00000455279 WDR5P61964 334 aaKnown RBP23.22■■□□□ 1.31
CCHCR1-209ENST00000455279 AP3B2Q13367 1082 aa23.22■■□□□ 1.31
CCHCR1-209ENST00000455279 CEP55Q53EZ4 464 aa23.22■■□□□ 1.31
CCHCR1-209ENST00000455279 ERICH6BQ5W0A0 696 aa23.22■■□□□ 1.31
CCHCR1-209ENST00000455279 MAFAQ8NHW3 353 aaPredicted RBP23.22■■□□□ 1.31
CCHCR1-209ENST00000455279 TM6SF1Q9BZW5 370 aa23.22■■□□□ 1.31
CCHCR1-209ENST00000455279 PDRG1Q9NUG6 133 aa23.22■■□□□ 1.31
CCHCR1-209ENST00000455279 MSRAQ9UJ68 235 aa23.22■■□□□ 1.31
CCHCR1-209ENST00000455279 KAT6AQ92794 2004 aa23.21■■□□□ 1.31
CCHCR1-209ENST00000455279 IGLV3-22A0A075B6J6 115 aa23.21■■□□□ 1.31
CCHCR1-209ENST00000455279 MEIS1O00470 390 aa23.21■■□□□ 1.31
CCHCR1-209ENST00000455279 FOSP01100 380 aaPredicted RBP23.21■■□□□ 1.31
CCHCR1-209ENST00000455279 RAB30Q15771 203 aa23.21■■□□□ 1.31
CCHCR1-209ENST00000455279 CDHR1Q96JP9 859 aa23.21■■□□□ 1.31
CCHCR1-209ENST00000455279 RNF26Q9BY78 433 aaPredicted RBP23.21■■□□□ 1.31
CCHCR1-209ENST00000455279 EHMT1Q9H9B1 1298 aa23.21■■□□□ 1.31
CCHCR1-209ENST00000455279 JPH1Q9HDC5 661 aaPredicted RBP23.21■■□□□ 1.31
CCHCR1-209ENST00000455279 SLC9A2Q9UBY0 812 aa23.21■■□□□ 1.31
CCHCR1-209ENST00000455279 CHD7Q9P2D1 2997 aa23.2■■□□□ 1.3
CCHCR1-209ENST00000455279 EPOPA6NHQ4 379 aa23.2■■□□□ 1.3
CCHCR1-209ENST00000455279 RFXAPO00287 272 aa23.2■■□□□ 1.3
CCHCR1-209ENST00000455279 CA3P07451 260 aa23.2■■□□□ 1.3
CCHCR1-209ENST00000455279 ACTR2P61160 394 aa23.2■■□□□ 1.3
CCHCR1-209ENST00000455279 GIMAP8Q8ND71 665 aaPredicted RBP23.2■■□□□ 1.3
CCHCR1-209ENST00000455279 CERS4Q9HA82 394 aa23.2■■□□□ 1.3
CCHCR1-209ENST00000455279 LCHNA4D1U4 455 aa23.19■■□□□ 1.3
CCHCR1-209ENST00000455279 RSPH10B2B2RC85 870 aa23.19■■□□□ 1.3
CCHCR1-209ENST00000455279 DHX15O43143 795 aaKnown RBP23.19■■□□□ 1.3
CCHCR1-209ENST00000455279 LGR5O75473 907 aa23.19■■□□□ 1.3
CCHCR1-209ENST00000455279 RSPH10BP0C881 870 aa23.19■■□□□ 1.3
CCHCR1-209ENST00000455279 ACTN1P12814 892 aa23.19■■□□□ 1.3
CCHCR1-209ENST00000455279 MARCH8Q5T0T0 291 aa23.19■■□□□ 1.3
CCHCR1-209ENST00000455279 CNKSR3Q6P9H4 555 aa23.19■■□□□ 1.3
CCHCR1-209ENST00000455279 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.19■■□□□ 1.3
CCHCR1-209ENST00000455279 PLA2G4DQ86XP0 818 aa23.19■■□□□ 1.3
CCHCR1-209ENST00000455279 HERC6Q8IVU3 1022 aa23.19■■□□□ 1.3
CCHCR1-209ENST00000455279 DBF4BQ8NFT6 615 aa23.19■■□□□ 1.3
CCHCR1-209ENST00000455279 TRAPPC12Q8WVT3 735 aa23.19■■□□□ 1.3
CCHCR1-209ENST00000455279 PRDM6Q9NQX0 595 aa23.19■■□□□ 1.3
CCHCR1-209ENST00000455279 ZNF215Q9UL58 517 aaPredicted RBP23.19■■□□□ 1.3
CCHCR1-209ENST00000455279 PCDHA11Q9Y5I1 949 aa23.19■■□□□ 1.3
CCHCR1-209ENST00000455279 MICAL3Q7RTP6 2002 aa23.18■■□□□ 1.3
CCHCR1-209ENST00000455279 NFASCO94856 1347 aa23.18■■□□□ 1.3
CCHCR1-209ENST00000455279 IGBP1P78318 339 aa23.18■■□□□ 1.3
CCHCR1-209ENST00000455279 SCRN1Q12765 414 aa23.18■■□□□ 1.3
CCHCR1-209ENST00000455279 PPFIA1Q13136 1202 aa23.18■■□□□ 1.3
CCHCR1-209ENST00000455279 MKRN4PQ13434 485 aaPredicted RBP23.18■■□□□ 1.3
CCHCR1-209ENST00000455279 NPY5RQ15761 445 aa23.18■■□□□ 1.3
CCHCR1-209ENST00000455279 GRIK4Q16099 956 aa23.18■■□□□ 1.3
CCHCR1-209ENST00000455279 REXO1Q8N1G1 1221 aaKnown RBP23.18■■□□□ 1.3
CCHCR1-209ENST00000455279 GLG1Q92896 1179 aa23.18■■□□□ 1.3
CCHCR1-209ENST00000455279 SLC9A7Q96T83 725 aa23.18■■□□□ 1.3
CCHCR1-209ENST00000455279 C6orf50Q9HD87 102 aa23.18■■□□□ 1.3
CCHCR1-209ENST00000455279 TPCN1Q9ULQ1 816 aa23.18■■□□□ 1.3
CCHCR1-209ENST00000455279 EMSYQ7Z589 1322 aa23.17■■□□□ 1.3
CCHCR1-209ENST00000455279 MAFGO15525 162 aa23.17■■□□□ 1.3
CCHCR1-209ENST00000455279 LARGE1O95461 756 aa23.17■■□□□ 1.3
CCHCR1-209ENST00000455279 CYP3A4P08684 503 aa23.17■■□□□ 1.3
CCHCR1-209ENST00000455279 ZNF76P36508 570 aa23.17■■□□□ 1.3
CCHCR1-209ENST00000455279 AKAP17AQ02040 695 aaKnown RBP23.17■■□□□ 1.3
CCHCR1-209ENST00000455279 PLCB4Q15147 1175 aa23.17■■□□□ 1.3
CCHCR1-209ENST00000455279 PPP2R2DQ66LE6 453 aa23.17■■□□□ 1.3
CCHCR1-209ENST00000455279 GJA10Q969M2 543 aa23.17■■□□□ 1.3
CCHCR1-209ENST00000455279 ZNF274Q96GC6 653 aaPredicted RBP23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms