RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 GJC2Q5T442 439 aaPredicted RBP16.46■□□□□ 0.23
SHANK2-210ENST00000449116 RESP18Q5W5W9 173 aa16.46■□□□□ 0.23
SHANK2-210ENST00000449116 SHC4Q6S5L8 630 aa16.46■□□□□ 0.23
SHANK2-210ENST00000449116 OR6J1Q8NGC5 347 aa16.46■□□□□ 0.23
SHANK2-210ENST00000449116 ERMNQ8TAM6 284 aa16.46■□□□□ 0.23
SHANK2-210ENST00000449116 SYMPKQ92797 1274 aaKnown RBP16.46■□□□□ 0.23
SHANK2-210ENST00000449116 SPATA33Q96N06 139 aa16.46■□□□□ 0.23
SHANK2-210ENST00000449116 HMX1Q9NP08 348 aaPredicted RBP16.46■□□□□ 0.23
SHANK2-210ENST00000449116 DISC1Q9NRI5 854 aa16.46■□□□□ 0.23
SHANK2-210ENST00000449116 PP2D1A8MPX8 630 aa16.45■□□□□ 0.22
SHANK2-210ENST00000449116 NOP56O00567 594 aaKnown RBP16.45■□□□□ 0.22
SHANK2-210ENST00000449116 GADD45BO75293 160 aaPredicted RBP16.45■□□□□ 0.22
SHANK2-210ENST00000449116 DUSP11O75319 330 aaKnown RBP16.45■□□□□ 0.22
SHANK2-210ENST00000449116 RARBP10826 455 aa16.45■□□□□ 0.22
SHANK2-210ENST00000449116 PTGS1P23219 599 aa16.45■□□□□ 0.22
SHANK2-210ENST00000449116 CMA1P23946 247 aa16.45■□□□□ 0.22
SHANK2-210ENST00000449116 MCM4P33991 863 aa16.45■□□□□ 0.22
SHANK2-210ENST00000449116 TXLNAP40222 546 aa16.45■□□□□ 0.22
SHANK2-210ENST00000449116 UBE2HP62256 183 aa16.45■□□□□ 0.22
SHANK2-210ENST00000449116 KRT79Q5XKE5 535 aa16.45■□□□□ 0.22
SHANK2-210ENST00000449116 HAUS3Q68CZ6 603 aa16.45■□□□□ 0.22
SHANK2-210ENST00000449116 TLK2Q86UE8 772 aa16.45■□□□□ 0.22
SHANK2-210ENST00000449116 PPTC7Q8NI37 304 aa16.45■□□□□ 0.22
SHANK2-210ENST00000449116 LENG1Q96BZ8 264 aaPredicted RBP16.45■□□□□ 0.22
SHANK2-210ENST00000449116 EPSTI1Q96J88 318 aa16.45■□□□□ 0.22
SHANK2-210ENST00000449116 LMBRD1Q9NUN5 540 aa16.45■□□□□ 0.22
SHANK2-210ENST00000449116 FAM13BQ9NYF5 915 aa16.45■□□□□ 0.22
SHANK2-210ENST00000449116 SAMM50Q9Y512 469 aa16.45■□□□□ 0.22
SHANK2-210ENST00000449116 PCDHA10Q9Y5I2 948 aa16.45■□□□□ 0.22
SHANK2-210ENST00000449116 DDX11L8A8MPP1 907 aa16.44■□□□□ 0.22
SHANK2-210ENST00000449116 DYNC1LI2O43237 492 aaPredicted RBP16.44■□□□□ 0.22
SHANK2-210ENST00000449116 MSCO60682 206 aa16.44■□□□□ 0.22
SHANK2-210ENST00000449116 ATG7O95352 703 aa16.44■□□□□ 0.22
SHANK2-210ENST00000449116 PSAPP07602 524 aa16.44■□□□□ 0.22
SHANK2-210ENST00000449116 CDC25AP30304 524 aa16.44■□□□□ 0.22
SHANK2-210ENST00000449116 UBA7P41226 1012 aa16.44■□□□□ 0.22
SHANK2-210ENST00000449116 HSDL1Q3SXM5 330 aa16.44■□□□□ 0.22
SHANK2-210ENST00000449116 TPRNQ4KMQ1 711 aa16.44■□□□□ 0.22
SHANK2-210ENST00000449116 MIS18BP1Q6P0N0 1132 aa16.44■□□□□ 0.22
SHANK2-210ENST00000449116 ABHD15Q6UXT9 468 aa16.44■□□□□ 0.22
SHANK2-210ENST00000449116 NEK9Q8TD19 979 aa16.44■□□□□ 0.22
SHANK2-210ENST00000449116 SNX29Q8TEQ0 813 aa16.44■□□□□ 0.22
SHANK2-210ENST00000449116 SEPT1Q8WYJ6 367 aa16.44■□□□□ 0.22
SHANK2-210ENST00000449116 MRPS27Q92552 414 aaKnown RBP16.44■□□□□ 0.22
SHANK2-210ENST00000449116 GPR20Q99678 358 aa16.44■□□□□ 0.22
SHANK2-210ENST00000449116 EIF2AK1Q9BQI3 630 aaKnown RBP16.44■□□□□ 0.22
SHANK2-210ENST00000449116 CCSER1Q9C0I3 900 aa16.44■□□□□ 0.22
SHANK2-210ENST00000449116 AP5M1Q9H0R1 490 aa16.44■□□□□ 0.22
SHANK2-210ENST00000449116 DDX20Q9UHI6 824 aaKnown RBP16.44■□□□□ 0.22
SHANK2-210ENST00000449116 TELO2Q9Y4R8 837 aa16.44■□□□□ 0.22
SHANK2-210ENST00000449116 DOCK5Q9H7D0 1870 aa16.44■□□□□ 0.22
SHANK2-210ENST00000449116 GSTTP1A0A1W2PQM5 241 aa16.43■□□□□ 0.22
SHANK2-210ENST00000449116 SLC26A4O43511 780 aa16.43■□□□□ 0.22
SHANK2-210ENST00000449116 SUPT20HL2P0C7V6 817 aa16.43■□□□□ 0.22
SHANK2-210ENST00000449116 CCT6AP40227 531 aaKnown RBP16.43■□□□□ 0.22
SHANK2-210ENST00000449116 USP49Q70CQ1 688 aa16.43■□□□□ 0.22
SHANK2-210ENST00000449116 CABP7Q86V35 215 aa16.43■□□□□ 0.22
SHANK2-210ENST00000449116 FSIP1Q8NA03 581 aa16.43■□□□□ 0.22
SHANK2-210ENST00000449116 AFG1LQ8WV93 481 aa16.43■□□□□ 0.22
SHANK2-210ENST00000449116 HSD17B14Q9BPX1 270 aa16.43■□□□□ 0.22
SHANK2-210ENST00000449116 MMTAG2Q9BU76 263 aaKnown RBP16.43■□□□□ 0.22
SHANK2-210ENST00000449116 POLR3CQ9BUI4 534 aaPredicted RBP16.43■□□□□ 0.22
SHANK2-210ENST00000449116 KDM3AQ9Y4C1 1321 aa16.43■□□□□ 0.22
SHANK2-210ENST00000449116 IGKV6D-21A0A0A0MT36 114 aa16.42■□□□□ 0.22
SHANK2-210ENST00000449116 FAM237AA0A1B0GTK4 181 aa16.42■□□□□ 0.22
SHANK2-210ENST00000449116 A0A1B0GVL5 298 aa16.42■□□□□ 0.22
SHANK2-210ENST00000449116 POTEFA5A3E0 1075 aa16.42■□□□□ 0.22
SHANK2-210ENST00000449116 A6NJR5 290 aa16.42■□□□□ 0.22
SHANK2-210ENST00000449116 P4HBP07237 508 aaKnown RBP16.42■□□□□ 0.22
SHANK2-210ENST00000449116 MMP3P08254 477 aa16.42■□□□□ 0.22
SHANK2-210ENST00000449116 RPA1P27694 616 aa16.42■□□□□ 0.22
SHANK2-210ENST00000449116 TCF7P36402 384 aaPredicted RBP16.42■□□□□ 0.22
SHANK2-210ENST00000449116 CPT1AP50416 773 aa16.42■□□□□ 0.22
SHANK2-210ENST00000449116 GJA9P57773 515 aa16.42■□□□□ 0.22
SHANK2-210ENST00000449116 BRDTQ58F21 947 aaPredicted RBP16.42■□□□□ 0.22
SHANK2-210ENST00000449116 COL13A1Q5TAT6 717 aaPredicted RBP16.42■□□□□ 0.22
SHANK2-210ENST00000449116 CATSPER3Q86XQ3 398 aa16.42■□□□□ 0.22
SHANK2-210ENST00000449116 RASSF8Q8NHQ8 419 aa16.42■□□□□ 0.22
SHANK2-210ENST00000449116 CALML4Q96GE6 196 aa16.42■□□□□ 0.22
SHANK2-210ENST00000449116 DYDC2Q96IM9 177 aa16.42■□□□□ 0.22
SHANK2-210ENST00000449116 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.42■□□□□ 0.223e-6■■■■□ 22.6
SHANK2-210ENST00000449116 UPF3AQ9H1J1 476 aaKnown RBP16.42■□□□□ 0.22
SHANK2-210ENST00000449116 SPC25Q9HBM1 224 aa16.42■□□□□ 0.22
SHANK2-210ENST00000449116 TUFT1Q9NNX1 390 aa16.42■□□□□ 0.22
SHANK2-210ENST00000449116 XPNPEP3Q9NQH7 507 aa16.42■□□□□ 0.22
SHANK2-210ENST00000449116 CCDC39Q9UFE4 941 aa16.42■□□□□ 0.22
SHANK2-210ENST00000449116 SYNRGQ9UMZ2 1314 aa16.42■□□□□ 0.22
SHANK2-210ENST00000449116 BACH1O14867 736 aa16.41■□□□□ 0.22
SHANK2-210ENST00000449116 PPFIA4O75335 1185 aa16.41■□□□□ 0.22
SHANK2-210ENST00000449116 MED24O75448 989 aa16.41■□□□□ 0.22
SHANK2-210ENST00000449116 LGR5O75473 907 aa16.41■□□□□ 0.22
SHANK2-210ENST00000449116 SLITRK3O94933 977 aa16.41■□□□□ 0.22
SHANK2-210ENST00000449116 SPATA31C1P0DKV0 1188 aa16.41■□□□□ 0.22
SHANK2-210ENST00000449116 HOXD8P13378 290 aaPredicted RBP16.41■□□□□ 0.22
SHANK2-210ENST00000449116 PFKFB1P16118 471 aa16.41■□□□□ 0.22
SHANK2-210ENST00000449116 PTMSP20962 102 aa16.41■□□□□ 0.22
SHANK2-210ENST00000449116 MUTP22033 750 aa16.41■□□□□ 0.22
SHANK2-210ENST00000449116 QARSP47897 775 aaKnown RBP16.41■□□□□ 0.22
SHANK2-210ENST00000449116 NKX3-2P78367 333 aa16.41■□□□□ 0.22
SHANK2-210ENST00000449116 CYP4A11Q02928 519 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms