RNA–Protein interactions for RNA: ENST00000437100.5

CPNE1-215, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-215ENST00000437100 TEKT3Q9BXF9 490 aa16.69■□□□□ 0.26
CPNE1-215ENST00000437100 UNC45AQ9H3U1 944 aa16.69■□□□□ 0.26
CPNE1-215ENST00000437100 POLR3EQ9NVU0 708 aa16.69■□□□□ 0.26
CPNE1-215ENST00000437100 EMSYQ7Z589 1322 aa16.69■□□□□ 0.26
CPNE1-215ENST00000437100 DDX39AO00148 427 aaKnown RBP16.68■□□□□ 0.26
CPNE1-215ENST00000437100 HAS3O00219 553 aa16.68■□□□□ 0.26
CPNE1-215ENST00000437100 LAD1O00515 517 aa16.68■□□□□ 0.26
CPNE1-215ENST00000437100 NOP56O00567 594 aaKnown RBP16.68■□□□□ 0.26
CPNE1-215ENST00000437100 CABYRO75952 493 aa16.68■□□□□ 0.26
CPNE1-215ENST00000437100 LGALS2P05162 132 aa16.68■□□□□ 0.26
CPNE1-215ENST00000437100 OR52Z1P0C646 297 aa16.68■□□□□ 0.26
CPNE1-215ENST00000437100 TCF7P36402 384 aaPredicted RBP16.68■□□□□ 0.26
CPNE1-215ENST00000437100 ATP2C1P98194 919 aaPredicted RBP16.68■□□□□ 0.26
CPNE1-215ENST00000437100 SP4Q02446 784 aa16.68■□□□□ 0.26
CPNE1-215ENST00000437100 SNX17Q15036 470 aa16.68■□□□□ 0.26
CPNE1-215ENST00000437100 SMAP1Q8IYB5 467 aaPredicted RBP16.68■□□□□ 0.26
CPNE1-215ENST00000437100 RDM1Q8NG50 284 aa16.68■□□□□ 0.26
CPNE1-215ENST00000437100 PAWRQ96IZ0 340 aaKnown RBP16.68■□□□□ 0.26
CPNE1-215ENST00000437100 C11orf49Q9H6J7 331 aa16.68■□□□□ 0.26
CPNE1-215ENST00000437100 MORC2Q9Y6X9 1032 aaPredicted RBP16.68■□□□□ 0.26
CPNE1-215ENST00000437100 WDR64B1ANS9 1081 aa16.67■□□□□ 0.26
CPNE1-215ENST00000437100 MYCNP04198 464 aaPredicted RBP16.67■□□□□ 0.26
CPNE1-215ENST00000437100 MYL3P08590 195 aa16.67■□□□□ 0.26
CPNE1-215ENST00000437100 SUPT20HL2P0C7V6 817 aa16.67■□□□□ 0.26
CPNE1-215ENST00000437100 ZNF286BP0CG31 522 aa16.67■□□□□ 0.26
CPNE1-215ENST00000437100 PTGDRQ13258 359 aa16.67■□□□□ 0.26
CPNE1-215ENST00000437100 C1orf53Q5VUE5 145 aa16.67■□□□□ 0.26
CPNE1-215ENST00000437100 NECAB2Q7Z6G3 386 aa16.67■□□□□ 0.26
CPNE1-215ENST00000437100 SLC43A3Q8NBI5 491 aa16.67■□□□□ 0.26
CPNE1-215ENST00000437100 MTG1Q9BT17 334 aaPredicted RBP16.67■□□□□ 0.26
CPNE1-215ENST00000437100 FTOQ9C0B1 505 aaKnown RBP eCLIP16.67■□□□□ 0.265e-10■□□□□ 9.7
CPNE1-215ENST00000437100 SCN10AQ9Y5Y9 1956 aa16.67■□□□□ 0.26
CPNE1-215ENST00000437100 DOCK5Q9H7D0 1870 aa16.67■□□□□ 0.26
CPNE1-215ENST00000437100 MKI67P46013 3256 aaKnown RBP16.67■□□□□ 0.26
CPNE1-215ENST00000437100 GRIN2DO15399 1336 aa16.67■□□□□ 0.26
CPNE1-215ENST00000437100 EML1O00423 815 aa16.66■□□□□ 0.26
CPNE1-215ENST00000437100 BAG4O95429 457 aaKnown RBP16.66■□□□□ 0.26
CPNE1-215ENST00000437100 BMP15O95972 392 aa16.66■□□□□ 0.26
CPNE1-215ENST00000437100 SFNP31947 248 aa16.66■□□□□ 0.26
CPNE1-215ENST00000437100 PRPHP41219 470 aa16.66■□□□□ 0.26
CPNE1-215ENST00000437100 JAK3P52333 1124 aa16.66■□□□□ 0.26
CPNE1-215ENST00000437100 PTPAQ15257 358 aa16.66■□□□□ 0.26
CPNE1-215ENST00000437100 FOXD4L5Q5VV16 416 aaPredicted RBP16.66■□□□□ 0.26
CPNE1-215ENST00000437100 TRIM50Q86XT4 487 aa16.66■□□□□ 0.26
CPNE1-215ENST00000437100 CCDC60Q8IWA6 550 aaPredicted RBP16.66■□□□□ 0.26
CPNE1-215ENST00000437100 AFAP1L1Q8TED9 768 aa16.66■□□□□ 0.26
CPNE1-215ENST00000437100 FOXD4L4Q8WXT5 416 aaPredicted RBP16.66■□□□□ 0.26
CPNE1-215ENST00000437100 GLT1D1Q96MS3 346 aa16.66■□□□□ 0.26
CPNE1-215ENST00000437100 TTC12Q9H892 705 aaPredicted RBP16.66■□□□□ 0.26
CPNE1-215ENST00000437100 PCDHA10Q9Y5I2 948 aa16.66■□□□□ 0.26
CPNE1-215ENST00000437100 IGSF9BQ9UPX0 1349 aa16.66■□□□□ 0.26
CPNE1-215ENST00000437100 NASPP49321 788 aaPredicted RBP16.65■□□□□ 0.26
CPNE1-215ENST00000437100 FXR2P51116 673 aaKnown RBP eCLIP16.65■□□□□ 0.262e-6■■■□□ 18.4
CPNE1-215ENST00000437100 SF3A1Q15459 793 aaKnown RBP16.65■□□□□ 0.26
CPNE1-215ENST00000437100 IL17AQ16552 155 aa16.65■□□□□ 0.26
CPNE1-215ENST00000437100 MIS18BP1Q6P0N0 1132 aa16.65■□□□□ 0.26
CPNE1-215ENST00000437100 PLPPR4Q7Z2D5 763 aa16.65■□□□□ 0.26
CPNE1-215ENST00000437100 FERMT2Q96AC1 680 aa16.65■□□□□ 0.26
CPNE1-215ENST00000437100 USP28Q96RU2 1077 aa16.65■□□□□ 0.26
CPNE1-215ENST00000437100 SENP6Q9GZR1 1112 aaPredicted RBP16.65■□□□□ 0.26
CPNE1-215ENST00000437100 STARD7Q9NQZ5 370 aa16.65■□□□□ 0.26
CPNE1-215ENST00000437100 DISC1Q9NRI5 854 aa16.65■□□□□ 0.26
CPNE1-215ENST00000437100 TCEAL9Q9UHQ7 104 aa16.65■□□□□ 0.26
CPNE1-215ENST00000437100 CIZ1Q9ULV3 898 aaPredicted RBP16.65■□□□□ 0.26
CPNE1-215ENST00000437100 PCDHA12Q9UN75 941 aa16.65■□□□□ 0.26
CPNE1-215ENST00000437100 CLIC4Q9Y696 253 aa16.65■□□□□ 0.26
CPNE1-215ENST00000437100 A0A0U1RQG5 324 aaPredicted RBP16.64■□□□□ 0.25
CPNE1-215ENST00000437100 CHMP2AO43633 222 aa16.64■□□□□ 0.25
CPNE1-215ENST00000437100 HOXC8P31273 242 aa16.64■□□□□ 0.25
CPNE1-215ENST00000437100 TXKP42681 527 aa16.64■□□□□ 0.25
CPNE1-215ENST00000437100 RGS19P49795 217 aa16.64■□□□□ 0.25
CPNE1-215ENST00000437100 PSEN2P49810 448 aa16.64■□□□□ 0.25
CPNE1-215ENST00000437100 CDK7P50613 346 aa16.64■□□□□ 0.25
CPNE1-215ENST00000437100 PSMC6P62333 389 aa16.64■□□□□ 0.25
CPNE1-215ENST00000437100 NUCB2P80303 420 aa16.64■□□□□ 0.25
CPNE1-215ENST00000437100 ARL6IP4Q66PJ3 421 aaKnown RBP16.64■□□□□ 0.25
CPNE1-215ENST00000437100 SLC39A5Q6ZMH5 540 aa16.64■□□□□ 0.25
CPNE1-215ENST00000437100 SESTD1Q86VW0 696 aa16.64■□□□□ 0.25
CPNE1-215ENST00000437100 KATNAL1Q9BW62 490 aa16.64■□□□□ 0.25
CPNE1-215ENST00000437100 MAFBQ9Y5Q3 323 aaPredicted RBP16.64■□□□□ 0.25
CPNE1-215ENST00000437100 H3BRB1 525 aa16.63■□□□□ 0.25
CPNE1-215ENST00000437100 MARCH6O60337 910 aa16.63■□□□□ 0.25
CPNE1-215ENST00000437100 PSAPP07602 524 aa16.63■□□□□ 0.25
CPNE1-215ENST00000437100 ATP4AP20648 1035 aa16.63■□□□□ 0.25
CPNE1-215ENST00000437100 SLC26A2P50443 739 aa16.63■□□□□ 0.25
CPNE1-215ENST00000437100 MFSD10Q14728 455 aa16.63■□□□□ 0.25
CPNE1-215ENST00000437100 EPHA7Q15375 998 aa16.63■□□□□ 0.25
CPNE1-215ENST00000437100 UTP14CQ5TAP6 766 aaKnown RBP16.63■□□□□ 0.25
CPNE1-215ENST00000437100 ATL3Q6DD88 541 aa16.63■□□□□ 0.25
CPNE1-215ENST00000437100 NFRKBQ6P4R8 1299 aa16.63■□□□□ 0.25
CPNE1-215ENST00000437100 MIER3Q7Z3K6 550 aa16.63■□□□□ 0.25
CPNE1-215ENST00000437100 IGSF22Q8N9C0 903 aa16.63■□□□□ 0.25
CPNE1-215ENST00000437100 SEZ6LQ9BYH1 1024 aa16.63■□□□□ 0.25
CPNE1-215ENST00000437100 SMARCAD1Q9H4L7 1026 aa16.63■□□□□ 0.25
CPNE1-215ENST00000437100 TUT1Q9H6E5 874 aaKnown RBP16.63■□□□□ 0.25
CPNE1-215ENST00000437100 ZNF215Q9UL58 517 aaPredicted RBP16.63■□□□□ 0.25
CPNE1-215ENST00000437100 CEP131Q9UPN4 1083 aa16.63■□□□□ 0.25
CPNE1-215ENST00000437100 POTEMA6NI47 508 aa16.62■□□□□ 0.25
CPNE1-215ENST00000437100 ARVCFO00192 962 aa16.62■□□□□ 0.25
CPNE1-215ENST00000437100 ZNF862O60290 1169 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms