RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 MAP2K1Q02750 393 aaPredicted RBP25.81■■□□□ 1.72
CPSF4-204ENST00000436336 ZSCAN23Q3MJ62 389 aa25.81■■□□□ 1.72
CPSF4-204ENST00000436336 TMEM119Q4V9L6 283 aa25.81■■□□□ 1.72
CPSF4-204ENST00000436336 CATSPER3Q86XQ3 398 aa25.81■■□□□ 1.72
CPSF4-204ENST00000436336 RDM1Q8NG50 284 aa25.81■■□□□ 1.72
CPSF4-204ENST00000436336 NEK9Q8TD19 979 aa25.81■■□□□ 1.72
CPSF4-204ENST00000436336 PLIN2Q99541 437 aa25.81■■□□□ 1.72
CPSF4-204ENST00000436336 TUFT1Q9NNX1 390 aa25.81■■□□□ 1.72
CPSF4-204ENST00000436336 SLC9A2Q9UBY0 812 aa25.81■■□□□ 1.72
CPSF4-204ENST00000436336 RBM47A0AV96 593 aaKnown RBP25.8■■□□□ 1.72
CPSF4-204ENST00000436336 WDR64B1ANS9 1081 aa25.8■■□□□ 1.72
CPSF4-204ENST00000436336 XRCC5P13010 732 aaKnown RBP25.8■■□□□ 1.72
CPSF4-204ENST00000436336 IRF5Q13568 498 aa25.8■■□□□ 1.72
CPSF4-204ENST00000436336 TTLL4Q14679 1199 aa25.8■■□□□ 1.72
CPSF4-204ENST00000436336 NAALADL2Q58DX5 795 aa25.8■■□□□ 1.72
CPSF4-204ENST00000436336 TAPT1Q6NXT6 567 aa25.8■■□□□ 1.72
CPSF4-204ENST00000436336 PDXDC2PQ6P474 469 aa25.8■■□□□ 1.72
CPSF4-204ENST00000436336 SMAP1Q8IYB5 467 aaPredicted RBP25.8■■□□□ 1.72
CPSF4-204ENST00000436336 HSD17B14Q9BPX1 270 aa25.8■■□□□ 1.72
CPSF4-204ENST00000436336 STK17AQ9UEE5 414 aa25.8■■□□□ 1.72
CPSF4-204ENST00000436336 HOOK1Q9UJC3 728 aaKnown RBP25.8■■□□□ 1.72
CPSF4-204ENST00000436336 MYH9P35579 1960 aaKnown RBP25.8■■□□□ 1.72
CPSF4-204ENST00000436336 SPATA31C1P0DKV0 1188 aa25.8■■□□□ 1.72
CPSF4-204ENST00000436336 MUTP22033 750 aa25.8■■□□□ 1.72
CPSF4-204ENST00000436336 ECM1Q16610 540 aa25.8■■□□□ 1.72
CPSF4-204ENST00000436336 CCDC62Q6P9F0 684 aa25.8■■□□□ 1.72
CPSF4-204ENST00000436336 RBM43Q6ZSC3 357 aaKnown RBP25.8■■□□□ 1.72
CPSF4-204ENST00000436336 KCTD17Q8N5Z5 321 aa25.8■■□□□ 1.72
CPSF4-204ENST00000436336 MAGEF1Q9HAY2 307 aa25.8■■□□□ 1.72
CPSF4-204ENST00000436336 FLRT1Q9NZU1 646 aa25.8■■□□□ 1.72
CPSF4-204ENST00000436336 SAMM50Q9Y512 469 aa25.8■■□□□ 1.72
CPSF4-204ENST00000436336 POTEB3A0JP26 581 aa25.79■■□□□ 1.72
CPSF4-204ENST00000436336 ARIH2O95376 493 aa25.79■■□□□ 1.72
CPSF4-204ENST00000436336 CCNE2O96020 404 aa25.79■■□□□ 1.72
CPSF4-204ENST00000436336 POTEBQ6S5H4 581 aa25.79■■□□□ 1.72
CPSF4-204ENST00000436336 CYFIP1Q7L576 1253 aa25.79■■□□□ 1.72
CPSF4-204ENST00000436336 PDGFCQ9NRA1 345 aa25.79■■□□□ 1.72
CPSF4-204ENST00000436336 TXNP10599 105 aaKnown RBP25.78■■□□□ 1.72
CPSF4-204ENST00000436336 ACVR2BQ13705 512 aa25.78■■□□□ 1.72
CPSF4-204ENST00000436336 CCL14Q16627 93 aa25.78■■□□□ 1.72
CPSF4-204ENST00000436336 LY6KQ17RY6 165 aa25.78■■□□□ 1.72
CPSF4-204ENST00000436336 DYDC2Q96IM9 177 aa25.78■■□□□ 1.72
CPSF4-204ENST00000436336 BCAS3Q9H6U6 928 aa25.78■■□□□ 1.72
CPSF4-204ENST00000436336 GABRQQ9UN88 632 aa25.78■■□□□ 1.72
CPSF4-204ENST00000436336 KIAA1024Q9UPX6 916 aa25.78■■□□□ 1.72
CPSF4-204ENST00000436336 FARP2O94887 1054 aaPredicted RBP25.77■■□□□ 1.72
CPSF4-204ENST00000436336 SLITRK3O94933 977 aa25.77■■□□□ 1.72
CPSF4-204ENST00000436336 IGHA2P01877 340 aa25.77■■□□□ 1.72
CPSF4-204ENST00000436336 FLT3LGP49771 235 aa25.77■■□□□ 1.72
CPSF4-204ENST00000436336 CYP4A11Q02928 519 aa25.77■■□□□ 1.72
CPSF4-204ENST00000436336 SH3RF1Q7Z6J0 888 aa25.77■■□□□ 1.72
CPSF4-204ENST00000436336 CD99L2Q8TCZ2 262 aa25.77■■□□□ 1.72
CPSF4-204ENST00000436336 LRRC15Q8TF66 581 aa25.77■■□□□ 1.72
CPSF4-204ENST00000436336 ERO1AQ96HE7 468 aa25.77■■□□□ 1.72
CPSF4-204ENST00000436336 BEGAINQ9BUH8 593 aa25.77■■□□□ 1.72
CPSF4-204ENST00000436336 RGL1Q9NZL6 768 aa25.77■■□□□ 1.72
CPSF4-204ENST00000436336 PCDHA10Q9Y5I2 948 aa25.77■■□□□ 1.72
CPSF4-204ENST00000436336 GGPS1O95749 300 aa25.77■■□□□ 1.72
CPSF4-204ENST00000436336 P4HBP07237 508 aaKnown RBP25.77■■□□□ 1.72
CPSF4-204ENST00000436336 HOXD10P28358 340 aa25.77■■□□□ 1.72
CPSF4-204ENST00000436336 CAP1Q01518 475 aa25.77■■□□□ 1.72
CPSF4-204ENST00000436336 PRKCZQ05513 592 aa25.77■■□□□ 1.72
CPSF4-204ENST00000436336 METTL7BQ6UX53 244 aa25.77■■□□□ 1.72
CPSF4-204ENST00000436336 PAGE5Q96GU1 130 aa25.77■■□□□ 1.72
CPSF4-204ENST00000436336 BLOC1S4Q9NUP1 217 aa25.77■■□□□ 1.72
CPSF4-204ENST00000436336 SYCE3A1L190 88 aa25.76■■□□□ 1.71
CPSF4-204ENST00000436336 FKTNO75072 461 aa25.76■■□□□ 1.71
CPSF4-204ENST00000436336 GNRH1P01148 92 aa25.76■■□□□ 1.71
CPSF4-204ENST00000436336 ACTR2P61160 394 aa25.76■■□□□ 1.71
CPSF4-204ENST00000436336 MDM2Q00987 491 aaPredicted RBP25.76■■□□□ 1.71
CPSF4-204ENST00000436336 POSTNQ15063 836 aa25.76■■□□□ 1.71
CPSF4-204ENST00000436336 LARP4BQ92615 738 aaKnown RBP25.76■■□□□ 1.71
CPSF4-204ENST00000436336 MLXIPQ9HAP2 919 aa25.76■■□□□ 1.71
CPSF4-204ENST00000436336 POTEFA5A3E0 1075 aa25.75■■□□□ 1.71
CPSF4-204ENST00000436336 CTTNQ14247 550 aaKnown RBP25.75■■□□□ 1.71
CPSF4-204ENST00000436336 CELF3Q5SZQ8 465 aaKnown RBP25.75■■□□□ 1.71
CPSF4-204ENST00000436336 POTEGQ6S5H5 508 aa25.75■■□□□ 1.71
CPSF4-204ENST00000436336 TPH2Q8IWU9 490 aa25.75■■□□□ 1.71
CPSF4-204ENST00000436336 CKAP2LQ8IYA6 745 aa25.75■■□□□ 1.71
CPSF4-204ENST00000436336 RAD54LQ92698 747 aa25.75■■□□□ 1.71
CPSF4-204ENST00000436336 KBTBD4Q9NVX7 518 aa25.75■■□□□ 1.71
CPSF4-204ENST00000436336 ZHX1Q9UKY1 873 aaPredicted RBP25.75■■□□□ 1.71
CPSF4-204ENST00000436336 FOXN1O15353 648 aa25.74■■□□□ 1.71
CPSF4-204ENST00000436336 ATG7O95352 703 aa25.74■■□□□ 1.71
CPSF4-204ENST00000436336 PSAPP07602 524 aa25.74■■□□□ 1.71
CPSF4-204ENST00000436336 ARHGEF6Q15052 776 aa25.74■■□□□ 1.71
CPSF4-204ENST00000436336 IQSEC1Q6DN90 963 aa25.74■■□□□ 1.71
CPSF4-204ENST00000436336 KCNK18Q7Z418 384 aa25.74■■□□□ 1.71
CPSF4-204ENST00000436336 DHX37Q8IY37 1157 aaKnown RBP25.74■■□□□ 1.71
CPSF4-204ENST00000436336 LXNQ9BS40 222 aa25.74■■□□□ 1.71
CPSF4-204ENST00000436336 SORBS3O60504 671 aa25.74■■□□□ 1.71
CPSF4-204ENST00000436336 CYP2C19P33261 490 aa25.74■■□□□ 1.71
CPSF4-204ENST00000436336 ADCYAP1R1P41586 468 aa25.74■■□□□ 1.71
CPSF4-204ENST00000436336 AFMP43652 599 aa25.74■■□□□ 1.71
CPSF4-204ENST00000436336 QARSP47897 775 aaKnown RBP25.74■■□□□ 1.71
CPSF4-204ENST00000436336 SP4Q02446 784 aa25.74■■□□□ 1.71
CPSF4-204ENST00000436336 PNOCQ13519 176 aa25.74■■□□□ 1.71
CPSF4-204ENST00000436336 MIS18BP1Q6P0N0 1132 aa25.74■■□□□ 1.71
CPSF4-204ENST00000436336 ABHD15Q6UXT9 468 aa25.74■■□□□ 1.71
CPSF4-204ENST00000436336 TRMT44Q8IYL2 757 aaKnown RBP25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms