RNA–Protein interactions for RNA: ENST00000434734.1

HMGB3P10-201, Transcript of high mobility group box 3 pseudogene 10, humanhuman

BASIC

Gene HMGB3P10, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P10-201ENST00000434734 PDGFDQ9GZP0 370 aaPredicted RBP6.22□□□□□ -1.41
HMGB3P10-201ENST00000434734 UNC45AQ9H3U1 944 aa6.22□□□□□ -1.41
HMGB3P10-201ENST00000434734 ATP6V0A4Q9HBG4 840 aa6.22□□□□□ -1.41
HMGB3P10-201ENST00000434734 CEP72Q9P209 647 aa6.22□□□□□ -1.41
HMGB3P10-201ENST00000434734 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.22□□□□□ -1.41
HMGB3P10-201ENST00000434734 JAG2Q9Y219 1238 aa6.22□□□□□ -1.41
HMGB3P10-201ENST00000434734 ZNF652Q9Y2D9 606 aa6.22□□□□□ -1.41
HMGB3P10-201ENST00000434734 ZNF451Q9Y4E5 1061 aa6.22□□□□□ -1.41
HMGB3P10-201ENST00000434734 NOP56O00567 594 aaKnown RBP6.21□□□□□ -1.42
HMGB3P10-201ENST00000434734 GNB5O14775 395 aa6.21□□□□□ -1.42
HMGB3P10-201ENST00000434734 B3GALT2O43825 422 aa6.21□□□□□ -1.42
HMGB3P10-201ENST00000434734 UBXN7O94888 489 aa6.21□□□□□ -1.42
HMGB3P10-201ENST00000434734 SLITRK5O94991 958 aa6.21□□□□□ -1.42
HMGB3P10-201ENST00000434734 KCNH1O95259 989 aa6.21□□□□□ -1.42
HMGB3P10-201ENST00000434734 CKMP06732 381 aa6.21□□□□□ -1.42
HMGB3P10-201ENST00000434734 POLBP06746 335 aa6.21□□□□□ -1.42
HMGB3P10-201ENST00000434734 YBX3P16989 372 aaKnown RBP eCLIP6.21□□□□□ -1.42
HMGB3P10-201ENST00000434734 XPAP23025 273 aaPredicted RBP6.21□□□□□ -1.42
HMGB3P10-201ENST00000434734 RPS6KB1P23443 525 aa6.21□□□□□ -1.42
HMGB3P10-201ENST00000434734 CNTFP26441 200 aa6.21□□□□□ -1.42
HMGB3P10-201ENST00000434734 KCNJ6P48051 423 aa6.21□□□□□ -1.42
HMGB3P10-201ENST00000434734 MECP2P51608 486 aaKnown RBP6.21□□□□□ -1.42
HMGB3P10-201ENST00000434734 CASP5P51878 434 aa6.21□□□□□ -1.42
HMGB3P10-201ENST00000434734 SNRPNP63162 240 aaKnown RBP6.21□□□□□ -1.42
HMGB3P10-201ENST00000434734 MAP4K2Q12851 820 aa6.21□□□□□ -1.42
HMGB3P10-201ENST00000434734 NEUROD1Q13562 356 aa6.21□□□□□ -1.42
HMGB3P10-201ENST00000434734 TAF5Q15542 800 aa6.21□□□□□ -1.42
HMGB3P10-201ENST00000434734 RGL3Q3MIN7 710 aa6.21□□□□□ -1.42
HMGB3P10-201ENST00000434734 SLC10A5Q5PT55 438 aa6.21□□□□□ -1.42
HMGB3P10-201ENST00000434734 SLC35F1Q5T1Q4 408 aa6.21□□□□□ -1.42
HMGB3P10-201ENST00000434734 RNF220Q5VTB9 566 aa6.21□□□□□ -1.42
HMGB3P10-201ENST00000434734 SCARA3Q6AZY7 606 aa6.21□□□□□ -1.42
HMGB3P10-201ENST00000434734 HFE2Q6ZVN8 426 aa6.21□□□□□ -1.42
HMGB3P10-201ENST00000434734 HEATR4Q86WZ0 1026 aa6.21□□□□□ -1.42
HMGB3P10-201ENST00000434734 TMTC1Q8IUR5 882 aa6.21□□□□□ -1.42
HMGB3P10-201ENST00000434734 CAMKK1Q8N5S9 505 aa6.21□□□□□ -1.42
HMGB3P10-201ENST00000434734 TGFBRAP1Q8WUH2 860 aa6.21□□□□□ -1.42
HMGB3P10-201ENST00000434734 DHRS1Q96LJ7 313 aa6.21□□□□□ -1.42
HMGB3P10-201ENST00000434734 MAP3K14Q99558 947 aa6.21□□□□□ -1.42
HMGB3P10-201ENST00000434734 NUDT16L1Q9BRJ7 211 aaKnown RBP6.21□□□□□ -1.42
HMGB3P10-201ENST00000434734 LRFN3Q9BTN0 628 aa6.21□□□□□ -1.42
HMGB3P10-201ENST00000434734 TRIT1Q9H3H1 467 aaKnown RBP6.21□□□□□ -1.42
HMGB3P10-201ENST00000434734 RRAGCQ9HB90 399 aa6.21□□□□□ -1.42
HMGB3P10-201ENST00000434734 ZCCHC17Q9NP64 241 aaKnown RBP6.21□□□□□ -1.42
HMGB3P10-201ENST00000434734 CORO2BQ9UQ03 480 aa6.21□□□□□ -1.42
HMGB3P10-201ENST00000434734 AKT3Q9Y243 479 aa6.21□□□□□ -1.42
HMGB3P10-201ENST00000434734 FAM170AA1A519 330 aa6.2□□□□□ -1.42
HMGB3P10-201ENST00000434734 PRAMEF27A3QJZ7 478 aa6.2□□□□□ -1.42
HMGB3P10-201ENST00000434734 LCHNA4D1U4 455 aa6.2□□□□□ -1.42
HMGB3P10-201ENST00000434734 GOLGA8AA7E2F4 631 aa6.2□□□□□ -1.42
HMGB3P10-201ENST00000434734 GOLGA8BA8MQT2 603 aa6.2□□□□□ -1.42
HMGB3P10-201ENST00000434734 B4E171 279 aa6.2□□□□□ -1.42
HMGB3P10-201ENST00000434734 H3BML4 177 aa6.2□□□□□ -1.42
HMGB3P10-201ENST00000434734 GOLIM4O00461 696 aa6.2□□□□□ -1.42
HMGB3P10-201ENST00000434734 AHCYL1O43865 530 aa6.2□□□□□ -1.42
HMGB3P10-201ENST00000434734 SIN3BO75182 1162 aa6.2□□□□□ -1.42
HMGB3P10-201ENST00000434734 ECEL1O95672 775 aa6.2□□□□□ -1.42
HMGB3P10-201ENST00000434734 CSTBP04080 98 aaKnown RBP6.2□□□□□ -1.42
HMGB3P10-201ENST00000434734 DHRS4L1P0CG22 281 aa6.2□□□□□ -1.42
HMGB3P10-201ENST00000434734 ESRRAP11474 423 aaPredicted RBP6.2□□□□□ -1.42
HMGB3P10-201ENST00000434734 HOXB4P17483 251 aaPredicted RBP6.2□□□□□ -1.42
HMGB3P10-201ENST00000434734 GRK4P32298 578 aa6.2□□□□□ -1.42
HMGB3P10-201ENST00000434734 OCRLQ01968 901 aa6.2□□□□□ -1.42
HMGB3P10-201ENST00000434734 ICA1Q05084 483 aa6.2□□□□□ -1.42
HMGB3P10-201ENST00000434734 CYP4F3Q08477 520 aa6.2□□□□□ -1.42
HMGB3P10-201ENST00000434734 POSTNQ15063 836 aa6.2□□□□□ -1.42
HMGB3P10-201ENST00000434734 TMEM177Q53S58 311 aa6.2□□□□□ -1.42
HMGB3P10-201ENST00000434734 PRR16Q569H4 304 aa6.2□□□□□ -1.42
HMGB3P10-201ENST00000434734 FAM209BQ5JX69 171 aa6.2□□□□□ -1.42
HMGB3P10-201ENST00000434734 FKBP15Q5T1M5 1219 aa6.2□□□□□ -1.42
HMGB3P10-201ENST00000434734 GTF2IRD2BQ6EKJ0 949 aa6.2□□□□□ -1.42
HMGB3P10-201ENST00000434734 STYK1Q6J9G0 422 aa6.2□□□□□ -1.42
HMGB3P10-201ENST00000434734 TXNDC11Q6PKC3 985 aa6.2□□□□□ -1.42
HMGB3P10-201ENST00000434734 NPNTQ6UXI9 565 aa6.2□□□□□ -1.42
HMGB3P10-201ENST00000434734 LINC00114Q6XXX2 140 aa6.2□□□□□ -1.42
HMGB3P10-201ENST00000434734 CYFIP1Q7L576 1253 aa6.2□□□□□ -1.42
HMGB3P10-201ENST00000434734 RAB44Q7Z6P3 723 aaPredicted RBP6.2□□□□□ -1.42
HMGB3P10-201ENST00000434734 MTDHQ86UE4 582 aaKnown RBP6.2□□□□□ -1.42
HMGB3P10-201ENST00000434734 GTF2IRD2Q86UP8 949 aa6.2□□□□□ -1.42
HMGB3P10-201ENST00000434734 DENND1CQ8IV53 801 aa6.2□□□□□ -1.42
HMGB3P10-201ENST00000434734 MAP4K3Q8IVH8 894 aa6.2□□□□□ -1.42
HMGB3P10-201ENST00000434734 CCDC144CPQ8IYA2 1237 aa6.2□□□□□ -1.42
HMGB3P10-201ENST00000434734 ESX1Q8N693 406 aa6.2□□□□□ -1.42
HMGB3P10-201ENST00000434734 CHST14Q8NCH0 376 aa6.2□□□□□ -1.42
HMGB3P10-201ENST00000434734 FLCNQ8NFG4 579 aa6.2□□□□□ -1.42
HMGB3P10-201ENST00000434734 SLC30A5Q8TAD4 765 aa6.2□□□□□ -1.42
HMGB3P10-201ENST00000434734 LMBR1Q8WVP7 490 aa6.2□□□□□ -1.42
HMGB3P10-201ENST00000434734 ASB12Q8WXK4 309 aa6.2□□□□□ -1.42
HMGB3P10-201ENST00000434734 USP13Q92995 863 aaPredicted RBP6.2□□□□□ -1.42
HMGB3P10-201ENST00000434734 BRD9Q9H8M2 597 aa6.2□□□□□ -1.42
HMGB3P10-201ENST00000434734 CABP5Q9NP86 173 aa6.2□□□□□ -1.42
HMGB3P10-201ENST00000434734 UBN1Q9NPG3 1134 aa6.2□□□□□ -1.42
HMGB3P10-201ENST00000434734 OXSMQ9NWU1 459 aa6.2□□□□□ -1.42
HMGB3P10-201ENST00000434734 NKIRAS2Q9NYR9 191 aa6.2□□□□□ -1.42
HMGB3P10-201ENST00000434734 GIMAP2Q9UG22 337 aa6.2□□□□□ -1.42
HMGB3P10-201ENST00000434734 SOX13Q9UN79 622 aa6.2□□□□□ -1.42
HMGB3P10-201ENST00000434734 L1RE1Q9UN81 338 aa6.2□□□□□ -1.42
HMGB3P10-201ENST00000434734 PCDHA11Q9Y5I1 949 aa6.2□□□□□ -1.42
HMGB3P10-201ENST00000434734 PTPDC1A2A3K4 754 aa6.19□□□□□ -1.42
HMGB3P10-201ENST00000434734 TTC36A6NLP5 189 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms