RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 KCNT2Q6UVM3 1135 aa4.21□□□□□ -1.74
HMGB1P9-201ENST00000429856 SPRED1Q7Z699 444 aa4.21□□□□□ -1.74
HMGB1P9-201ENST00000429856 B3GNT8Q7Z7M8 397 aa4.21□□□□□ -1.74
HMGB1P9-201ENST00000429856 MTDHQ86UE4 582 aaKnown RBP4.21□□□□□ -1.74
HMGB1P9-201ENST00000429856 RPUSD2Q8IZ73 545 aaKnown RBP4.21□□□□□ -1.74
HMGB1P9-201ENST00000429856 PHOSPHO1Q8TCT1 267 aa4.21□□□□□ -1.74
HMGB1P9-201ENST00000429856 SH3TC2Q8TF17 1288 aa4.21□□□□□ -1.74
HMGB1P9-201ENST00000429856 MRPL4Q9BYD3 311 aaKnown RBP4.21□□□□□ -1.74
HMGB1P9-201ENST00000429856 KLHL42Q9P2K6 505 aa4.21□□□□□ -1.74
HMGB1P9-201ENST00000429856 FBXL7Q9UJT9 491 aa4.21□□□□□ -1.74
HMGB1P9-201ENST00000429856 ZNF652Q9Y2D9 606 aa4.21□□□□□ -1.74
HMGB1P9-201ENST00000429856 ZNF536O15090 1300 aa4.21□□□□□ -1.74
HMGB1P9-201ENST00000429856 ESYT3A0FGR9 886 aa4.2□□□□□ -1.74
HMGB1P9-201ENST00000429856 BLACEA4D250 179 aa4.2□□□□□ -1.74
HMGB1P9-201ENST00000429856 HGSO14964 777 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P9-201ENST00000429856 MSCO60682 206 aa4.2□□□□□ -1.74
HMGB1P9-201ENST00000429856 DLX2Q07687 328 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P9-201ENST00000429856 SPIRE1Q08AE8 756 aa4.2□□□□□ -1.74
HMGB1P9-201ENST00000429856 SQSTM1Q13501 440 aa4.2□□□□□ -1.74
HMGB1P9-201ENST00000429856 TRIM61Q5EBN2 209 aa4.2□□□□□ -1.74
HMGB1P9-201ENST00000429856 STEAP3Q658P3 488 aa4.2□□□□□ -1.74
HMGB1P9-201ENST00000429856 CRIP3Q6Q6R5 217 aa4.2□□□□□ -1.74
HMGB1P9-201ENST00000429856 FAM124AQ86V42 546 aa4.2□□□□□ -1.74
HMGB1P9-201ENST00000429856 ZNF761Q86XN6 746 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P9-201ENST00000429856 LGI4Q8N135 537 aa4.2□□□□□ -1.74
HMGB1P9-201ENST00000429856 SYNPOQ8N3V7 929 aa4.2□□□□□ -1.74
HMGB1P9-201ENST00000429856 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.2□□□□□ -1.74
HMGB1P9-201ENST00000429856 CPA5Q8WXQ8 436 aa4.2□□□□□ -1.74
HMGB1P9-201ENST00000429856 CDK5RAP1Q96SZ6 601 aaKnown RBP4.2□□□□□ -1.74
HMGB1P9-201ENST00000429856 CDIP1Q9H305 208 aa4.2□□□□□ -1.74
HMGB1P9-201ENST00000429856 PCDH18Q9HCL0 1135 aa4.2□□□□□ -1.74
HMGB1P9-201ENST00000429856 NGRNQ9NPE2 291 aaKnown RBP4.2□□□□□ -1.74
HMGB1P9-201ENST00000429856 FANCLQ9NW38 375 aa4.2□□□□□ -1.74
HMGB1P9-201ENST00000429856 IFT57Q9NWB7 429 aa4.2□□□□□ -1.74
HMGB1P9-201ENST00000429856 SFMBT1Q9UHJ3 866 aa4.2□□□□□ -1.74
HMGB1P9-201ENST00000429856 TSC22D4Q9Y3Q8 395 aa4.2□□□□□ -1.74
HMGB1P9-201ENST00000429856 COL4A3BPQ9Y5P4 624 aa4.2□□□□□ -1.74
HMGB1P9-201ENST00000429856 hCG_2014768A0A024R1R8 64 aa4.19□□□□□ -1.74
HMGB1P9-201ENST00000429856 PLD2O14939 933 aa4.19□□□□□ -1.74
HMGB1P9-201ENST00000429856 GSTA4O15217 222 aa4.19□□□□□ -1.74
HMGB1P9-201ENST00000429856 SGSM2O43147 1006 aa4.19□□□□□ -1.74
HMGB1P9-201ENST00000429856 MARCH6O60337 910 aa4.19□□□□□ -1.74
HMGB1P9-201ENST00000429856 SOD2P04179 222 aa4.19□□□□□ -1.74
HMGB1P9-201ENST00000429856 ASGR2P07307 311 aa4.19□□□□□ -1.74
HMGB1P9-201ENST00000429856 GNAT1P11488 350 aa4.19□□□□□ -1.74
HMGB1P9-201ENST00000429856 PMLP29590 882 aa4.19□□□□□ -1.74
HMGB1P9-201ENST00000429856 GUCY1A3Q02108 690 aa4.19□□□□□ -1.74
HMGB1P9-201ENST00000429856 PAK1Q13153 545 aa4.19□□□□□ -1.74
HMGB1P9-201ENST00000429856 TKFCQ3LXA3 575 aa4.19□□□□□ -1.74
HMGB1P9-201ENST00000429856 PLEKHG4Q58EX7 1191 aa4.19□□□□□ -1.74
HMGB1P9-201ENST00000429856 BORAQ6PGQ7 559 aa4.19□□□□□ -1.74
HMGB1P9-201ENST00000429856 ETV3LQ6ZN32 361 aa4.19□□□□□ -1.74
HMGB1P9-201ENST00000429856 MILR1Q7Z6M3 343 aa4.19□□□□□ -1.74
HMGB1P9-201ENST00000429856 FILIP1Q7Z7B0 1213 aa4.19□□□□□ -1.74
HMGB1P9-201ENST00000429856 MIB1Q86YT6 1006 aa4.19□□□□□ -1.74
HMGB1P9-201ENST00000429856 Q8N1X5 172 aa4.19□□□□□ -1.74
HMGB1P9-201ENST00000429856 GSTCDQ8NEC7 633 aa4.19□□□□□ -1.74
HMGB1P9-201ENST00000429856 SMOC1Q9H4F8 434 aa4.19□□□□□ -1.74
HMGB1P9-201ENST00000429856 RXFP1Q9HBX9 757 aa4.19□□□□□ -1.74
HMGB1P9-201ENST00000429856 NCOA5Q9HCD5 579 aaKnown RBP4.19□□□□□ -1.74
HMGB1P9-201ENST00000429856 TMEM260Q9NX78 707 aa4.19□□□□□ -1.74
HMGB1P9-201ENST00000429856 NDOR1Q9UHB4 597 aa4.19□□□□□ -1.74
HMGB1P9-201ENST00000429856 TRAF6Q9Y4K3 522 aa4.19□□□□□ -1.74
HMGB1P9-201ENST00000429856 PCDHB4Q9Y5E5 795 aa4.19□□□□□ -1.74
HMGB1P9-201ENST00000429856 HCFC2Q9Y5Z7 792 aa4.19□□□□□ -1.74
HMGB1P9-201ENST00000429856 ASXL2Q76L83 1435 aa4.19□□□□□ -1.74
HMGB1P9-201ENST00000429856 ARVCFO00192 962 aa4.18□□□□□ -1.74
HMGB1P9-201ENST00000429856 WNT9AO14904 365 aa4.18□□□□□ -1.74
HMGB1P9-201ENST00000429856 KCNQ2O43526 872 aa4.18□□□□□ -1.74
HMGB1P9-201ENST00000429856 TADA3O75528 432 aa4.18□□□□□ -1.74
HMGB1P9-201ENST00000429856 OTOP3Q7RTS5 596 aa4.18□□□□□ -1.74
HMGB1P9-201ENST00000429856 ZC3H18Q86VM9 953 aaKnown RBP4.18□□□□□ -1.74
HMGB1P9-201ENST00000429856 HOMER1Q86YM7 354 aa4.18□□□□□ -1.74
HMGB1P9-201ENST00000429856 TRIM48Q8IWZ4 208 aa4.18□□□□□ -1.74
HMGB1P9-201ENST00000429856 FAM126BQ8IXS8 530 aa4.18□□□□□ -1.74
HMGB1P9-201ENST00000429856 ADAMTS17Q8TE56 1095 aa4.18□□□□□ -1.74
HMGB1P9-201ENST00000429856 STAG1Q8WVM7 1258 aa4.18□□□□□ -1.74
HMGB1P9-201ENST00000429856 DDX11Q96FC9 970 aa4.18□□□□□ -1.74
HMGB1P9-201ENST00000429856 YIPF4Q9BSR8 244 aa4.18□□□□□ -1.74
HMGB1P9-201ENST00000429856 JAM3Q9BX67 310 aa4.18□□□□□ -1.74
HMGB1P9-201ENST00000429856 VPS11Q9H270 941 aa4.18□□□□□ -1.74
HMGB1P9-201ENST00000429856 IPPKQ9H8X2 491 aa4.18□□□□□ -1.74
HMGB1P9-201ENST00000429856 SLC6A20Q9NP91 592 aa4.18□□□□□ -1.74
HMGB1P9-201ENST00000429856 PCDH12Q9NPG4 1184 aa4.18□□□□□ -1.74
HMGB1P9-201ENST00000429856 MYOTQ9UBF9 498 aa4.18□□□□□ -1.74
HMGB1P9-201ENST00000429856 PPARGC1AQ9UBK2 798 aaKnown RBP4.18□□□□□ -1.74
HMGB1P9-201ENST00000429856 ST6GALNAC2Q9UJ37 374 aa4.18□□□□□ -1.74
HMGB1P9-201ENST00000429856 SIT1Q9Y3P8 196 aa4.18□□□□□ -1.74
HMGB1P9-201ENST00000429856 CDC45O75419 566 aa4.17□□□□□ -1.74
HMGB1P9-201ENST00000429856 AMHP03971 560 aa4.17□□□□□ -1.74
HMGB1P9-201ENST00000429856 MC3RP41968 323 aa4.17□□□□□ -1.74
HMGB1P9-201ENST00000429856 IGBP1P78318 339 aa4.17□□□□□ -1.74
HMGB1P9-201ENST00000429856 AMPD3Q01432 767 aa4.17□□□□□ -1.74
HMGB1P9-201ENST00000429856 CACNB2Q08289 660 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P9-201ENST00000429856 TCEA2Q15560 299 aa4.17□□□□□ -1.74
HMGB1P9-201ENST00000429856 FNDC3BQ53EP0 1204 aaKnown RBP4.17□□□□□ -1.74
HMGB1P9-201ENST00000429856 FAM47CQ5HY64 1035 aa4.17□□□□□ -1.74
HMGB1P9-201ENST00000429856 HABP4Q5JVS0 413 aaKnown RBP4.17□□□□□ -1.74
HMGB1P9-201ENST00000429856 ZC3H7AQ8IWR0 971 aaKnown RBP4.17□□□□□ -1.74
HMGB1P9-201ENST00000429856 TTLL11Q8NHH1 800 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms