RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, human

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIF3L1-206	ENST00000416651	MSLNL	Q96KJ4	702 aa		10.31	□□□□□ -0.76
NIF3L1-206	ENST00000416651	ALG1	Q9BT22	464 aa		10.31	□□□□□ -0.76
NIF3L1-206	ENST00000416651	SMOC2	Q9H3U7	446 aa		10.31	□□□□□ -0.76
NIF3L1-206	ENST00000416651	INCENP	Q9NQS7	918 aa		10.31	□□□□□ -0.76
NIF3L1-206	ENST00000416651	ATP8A2	Q9NTI2	1148 aa		10.31	□□□□□ -0.76
NIF3L1-206	ENST00000416651	CD207	Q9UJ71	328 aa		10.31	□□□□□ -0.76
NIF3L1-206	ENST00000416651	RALY	Q9UKM9	306 aa	Known RBP	10.31	□□□□□ -0.76
NIF3L1-206	ENST00000416651	ISY1	Q9ULR0	285 aa	Known RBP	10.31	□□□□□ -0.76
NIF3L1-206	ENST00000416651	MINDY4B	A8MYZ0	360 aa		10.3	□□□□□ -0.76
NIF3L1-206	ENST00000416651	JUND	P17535	347 aa		10.3	□□□□□ -0.76
NIF3L1-206	ENST00000416651	MCC	P23508	829 aa		10.3	□□□□□ -0.76
NIF3L1-206	ENST00000416651	DNAJB1	P25685	340 aa		10.3	□□□□□ -0.76
NIF3L1-206	ENST00000416651	GUCA2A	Q02747	115 aa		10.3	□□□□□ -0.76
NIF3L1-206	ENST00000416651	ADAM15	Q13444	863 aa		10.3	□□□□□ -0.76
NIF3L1-206	ENST00000416651	LRRFIP1	Q32MZ4	808 aa	Known RBP	10.3	□□□□□ -0.76
NIF3L1-206	ENST00000416651	TTBK2	Q6IQ55	1244 aa		10.3	□□□□□ -0.76
NIF3L1-206	ENST00000416651	CHST3	Q7LGC8	479 aa		10.3	□□□□□ -0.76
NIF3L1-206	ENST00000416651	ADSSL1	Q8N142	457 aa		10.3	□□□□□ -0.76
NIF3L1-206	ENST00000416651	TMEM105	Q8N8V8	129 aa		10.3	□□□□□ -0.76
NIF3L1-206	ENST00000416651	CAGE1	Q8TC20	777 aa		10.3	□□□□□ -0.76
NIF3L1-206	ENST00000416651	MKL1	Q969V6	931 aa		10.3	□□□□□ -0.76
NIF3L1-206	ENST00000416651	RMDN1	Q96DB5	314 aa		10.3	□□□□□ -0.76
NIF3L1-206	ENST00000416651	RPGRIP1	Q96KN7	1286 aa		10.3	□□□□□ -0.76
NIF3L1-206	ENST00000416651	MTMR4	Q9NYA4	1195 aa		10.3	□□□□□ -0.76
NIF3L1-206	ENST00000416651	FAM50B	Q9Y247	325 aa		10.3	□□□□□ -0.76
NIF3L1-206	ENST00000416651	DMXL1	Q9Y485	3027 aa		10.3	□□□□□ -0.76
NIF3L1-206	ENST00000416651	TPR	P12270	2363 aa	Known RBP	10.29	□□□□□ -0.76
NIF3L1-206	ENST00000416651	CAPN5	O15484	640 aa	Predicted RBP	10.29	□□□□□ -0.76
NIF3L1-206	ENST00000416651	SP100	P23497	879 aa	Predicted RBP	10.29	□□□□□ -0.76
NIF3L1-206	ENST00000416651	PTPN11	Q06124	597 aa	Predicted RBP	10.29	□□□□□ -0.76
NIF3L1-206	ENST00000416651	RBL2	Q08999	1139 aa		10.29	□□□□□ -0.76
NIF3L1-206	ENST00000416651	SIGLEC14	Q08ET2	396 aa		10.29	□□□□□ -0.76
NIF3L1-206	ENST00000416651	LY6K	Q17RY6	165 aa		10.29	□□□□□ -0.76
NIF3L1-206	ENST00000416651	RETREG3	Q86VR2	466 aa		10.29	□□□□□ -0.76
NIF3L1-206	ENST00000416651	BOLA2	Q9H3K6	86 aa		10.29	□□□□□ -0.76
NIF3L1-206	ENST00000416651	CTNNA3	Q9UI47	895 aa		10.29	□□□□□ -0.76
NIF3L1-206	ENST00000416651	CDH22	Q9UJ99	828 aa		10.29	□□□□□ -0.76
NIF3L1-206	ENST00000416651	PRR12	Q9ULL5	1215 aa		10.29	□□□□□ -0.76
NIF3L1-206	ENST00000416651	BARX2	Q9UMQ3	279 aa	Predicted RBP	10.29	□□□□□ -0.76
NIF3L1-206	ENST00000416651	MTMR7	Q9Y216	660 aa		10.29	□□□□□ -0.76
NIF3L1-206	ENST00000416651	ZNF292	O60281	2723 aa		10.29	□□□□□ -0.76
NIF3L1-206	ENST00000416651	EP300	Q09472	2414 aa	Predicted RBP	10.28	□□□□□ -0.76
NIF3L1-206	ENST00000416651	GSG1L2	A8MUP6	293 aa		10.28	□□□□□ -0.76
NIF3L1-206	ENST00000416651		H3BM21	787 aa		10.28	□□□□□ -0.76
NIF3L1-206	ENST00000416651	SORBS3	O60504	671 aa		10.28	□□□□□ -0.76
NIF3L1-206	ENST00000416651	GLP2R	O95838	553 aa		10.28	□□□□□ -0.76
NIF3L1-206	ENST00000416651	MMP3	P08254	477 aa		10.28	□□□□□ -0.76
NIF3L1-206	ENST00000416651	TXN	P10599	105 aa	Known RBP	10.28	□□□□□ -0.76
NIF3L1-206	ENST00000416651	CALML3	P27482	149 aa		10.28	□□□□□ -0.76
NIF3L1-206	ENST00000416651	CTNNB1	P35222	781 aa		10.28	□□□□□ -0.76
NIF3L1-206	ENST00000416651	SLC16A2	P36021	539 aa		10.28	□□□□□ -0.76
NIF3L1-206	ENST00000416651	NBL1	P41271	181 aa		10.28	□□□□□ -0.76
NIF3L1-206	ENST00000416651	ARHGAP1	Q07960	439 aa		10.28	□□□□□ -0.76
NIF3L1-206	ENST00000416651	CBX2	Q14781	532 aa	Predicted RBP	10.28	□□□□□ -0.76
NIF3L1-206	ENST00000416651	STAG1	Q8WVM7	1258 aa		10.28	□□□□□ -0.76
NIF3L1-206	ENST00000416651	ARHGAP45	Q92619	1136 aa		10.28	□□□□□ -0.76
NIF3L1-206	ENST00000416651	FRAT1	Q92837	279 aa	Predicted RBP	10.28	□□□□□ -0.76
NIF3L1-206	ENST00000416651	TOP1MT	Q969P6	601 aa		10.28	□□□□□ -0.76
NIF3L1-206	ENST00000416651	YME1L1	Q96TA2	773 aa		10.28	□□□□□ -0.76
NIF3L1-206	ENST00000416651	POP1	Q99575	1024 aa	Known RBP	10.28	□□□□□ -0.76
NIF3L1-206	ENST00000416651	PRRX2	Q99811	253 aa		10.28	□□□□□ -0.76
NIF3L1-206	ENST00000416651	MKNK2	Q9HBH9	465 aa		10.28	□□□□□ -0.76
NIF3L1-206	ENST00000416651	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	10.28	□□□□□ -0.76
NIF3L1-206	ENST00000416651	GTF2IRD1	Q9UHL9	959 aa		10.28	□□□□□ -0.76
NIF3L1-206	ENST00000416651	CCPG1	Q9ULG6	757 aa		10.28	□□□□□ -0.76
NIF3L1-206	ENST00000416651	PTPDC1	A2A3K4	754 aa		10.27	□□□□□ -0.77
NIF3L1-206	ENST00000416651	SIAH2	O43255	324 aa		10.27	□□□□□ -0.77
NIF3L1-206	ENST00000416651	NMT2	O60551	498 aa		10.27	□□□□□ -0.77
NIF3L1-206	ENST00000416651	EYA4	O95677	639 aa		10.27	□□□□□ -0.77
NIF3L1-206	ENST00000416651	AMH	P03971	560 aa		10.27	□□□□□ -0.77
NIF3L1-206	ENST00000416651	ZNF286B	P0CG31	522 aa		10.27	□□□□□ -0.77
NIF3L1-206	ENST00000416651	STAT2	P52630	851 aa		10.27	□□□□□ -0.77
NIF3L1-206	ENST00000416651	IK	Q13123	557 aa	Predicted RBP	10.27	□□□□□ -0.77
NIF3L1-206	ENST00000416651	PPP2R5B	Q15173	497 aa		10.27	□□□□□ -0.77
NIF3L1-206	ENST00000416651	TTF1	Q15361	905 aa	Predicted RBP	10.27	□□□□□ -0.77
NIF3L1-206	ENST00000416651	CCDC62	Q6P9F0	684 aa		10.27	□□□□□ -0.77
NIF3L1-206	ENST00000416651	SESTD1	Q86VW0	696 aa		10.27	□□□□□ -0.77
NIF3L1-206	ENST00000416651	EHBP1	Q8NDI1	1231 aa		10.27	□□□□□ -0.77
NIF3L1-206	ENST00000416651	GMCL1P1	Q8NEA9	526 aa		10.27	□□□□□ -0.77
NIF3L1-206	ENST00000416651	CLEC4D	Q8WXI8	215 aa		10.27	□□□□□ -0.77
NIF3L1-206	ENST00000416651	TBC1D5	Q92609	795 aa		10.27	□□□□□ -0.77
NIF3L1-206	ENST00000416651	USP15	Q9Y4E8	981 aa	Predicted RBP	10.27	□□□□□ -0.77
NIF3L1-206	ENST00000416651	RALGAPA2	Q2PPJ7	1873 aa		10.26	□□□□□ -0.77
NIF3L1-206	ENST00000416651	ZMYND10	O75800	440 aa		10.26	□□□□□ -0.77
NIF3L1-206	ENST00000416651	FDX1	P10109	184 aa		10.26	□□□□□ -0.77
NIF3L1-206	ENST00000416651	EDNRB	P24530	442 aa		10.26	□□□□□ -0.77
NIF3L1-206	ENST00000416651	BMPR1A	P36894	532 aa		10.26	□□□□□ -0.77
NIF3L1-206	ENST00000416651	NDUFV1	P49821	464 aa		10.26	□□□□□ -0.77
NIF3L1-206	ENST00000416651	PDE4B	Q07343	736 aa		10.26	□□□□□ -0.77
NIF3L1-206	ENST00000416651	AMHR2	Q16671	573 aa		10.26	□□□□□ -0.77
NIF3L1-206	ENST00000416651	TKFC	Q3LXA3	575 aa		10.26	□□□□□ -0.77
NIF3L1-206	ENST00000416651	PLEKHG4	Q58EX7	1191 aa		10.26	□□□□□ -0.77
NIF3L1-206	ENST00000416651	RBM23	Q86U06	439 aa	Known RBP	10.26	□□□□□ -0.77
NIF3L1-206	ENST00000416651	CCDC155	Q8N6L0	562 aa		10.26	□□□□□ -0.77
NIF3L1-206	ENST00000416651	VN1R2	Q8NFZ6	395 aa		10.26	□□□□□ -0.77
NIF3L1-206	ENST00000416651	RIPOR3	Q96MK2	946 aa		10.26	□□□□□ -0.77
NIF3L1-206	ENST00000416651	STRBP	Q96SI9	672 aa	Known RBP	10.26	□□□□□ -0.77
NIF3L1-206	ENST00000416651	APOL5	Q9BWW9	433 aa		10.26	□□□□□ -0.77
NIF3L1-206	ENST00000416651	PAG1	Q9NWQ8	432 aa		10.26	□□□□□ -0.77
NIF3L1-206	ENST00000416651	SUPT16H	Q9Y5B9	1047 aa	Known RBP	10.26	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms