RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 FAM47CQ5HY64 1035 aa5.45□□□□□ -1.54
HMGB3P23-201ENST00000414981 ARHGAP36Q6ZRI8 547 aa5.45□□□□□ -1.54
HMGB3P23-201ENST00000414981 OSTM1Q86WC4 334 aa5.45□□□□□ -1.54
HMGB3P23-201ENST00000414981 SLC7A14Q8TBB6 771 aa5.45□□□□□ -1.54
HMGB3P23-201ENST00000414981 SH3RF2Q8TEC5 729 aa5.45□□□□□ -1.54
HMGB3P23-201ENST00000414981 MRFAP1L1Q96HT8 127 aa5.45□□□□□ -1.54
HMGB3P23-201ENST00000414981 SLC52A2Q9HAB3 445 aa5.45□□□□□ -1.54
HMGB3P23-201ENST00000414981 CATSPERZQ9NTU4 200 aa5.45□□□□□ -1.54
HMGB3P23-201ENST00000414981 USP40Q9NVE5 1235 aa5.45□□□□□ -1.54
HMGB3P23-201ENST00000414981 TELO2Q9Y4R8 837 aa5.45□□□□□ -1.54
HMGB3P23-201ENST00000414981 C9orf118A6NHY6 69 aa5.44□□□□□ -1.54
HMGB3P23-201ENST00000414981 KRTAP9-7A8MTY7 169 aa5.44□□□□□ -1.54
HMGB3P23-201ENST00000414981 NPTXRO95502 500 aa5.44□□□□□ -1.54
HMGB3P23-201ENST00000414981 LTFP02788 710 aa5.44□□□□□ -1.54
HMGB3P23-201ENST00000414981 CHGBP05060 677 aa5.44□□□□□ -1.54
HMGB3P23-201ENST00000414981 SRGAP2CP0DJJ0 459 aa5.44□□□□□ -1.54
HMGB3P23-201ENST00000414981 PYGMP11217 842 aa5.44□□□□□ -1.54
HMGB3P23-201ENST00000414981 ZNF28P17035 718 aa5.44□□□□□ -1.54
HMGB3P23-201ENST00000414981 ERICH6BQ5W0A0 696 aa5.44□□□□□ -1.54
HMGB3P23-201ENST00000414981 ZC3H7AQ8IWR0 971 aaKnown RBP5.44□□□□□ -1.54
HMGB3P23-201ENST00000414981 DTX3Q8N9I9 347 aa5.44□□□□□ -1.54
HMGB3P23-201ENST00000414981 TXNDC5Q8NBS9 432 aaKnown RBP5.44□□□□□ -1.54
HMGB3P23-201ENST00000414981 LNPKQ9C0E8 428 aa5.44□□□□□ -1.54
HMGB3P23-201ENST00000414981 DLL4Q9NR61 685 aa5.44□□□□□ -1.54
HMGB3P23-201ENST00000414981 NDOR1Q9UHB4 597 aa5.44□□□□□ -1.54
HMGB3P23-201ENST00000414981 PTCH2Q9Y6C5 1203 aa5.44□□□□□ -1.54
HMGB3P23-201ENST00000414981 MROH6A6NGR9 719 aa5.43□□□□□ -1.54
HMGB3P23-201ENST00000414981 ACOT7O00154 380 aa5.43□□□□□ -1.54
HMGB3P23-201ENST00000414981 PLD2O14939 933 aa5.43□□□□□ -1.54
HMGB3P23-201ENST00000414981 AMY2AP04746 511 aa5.43□□□□□ -1.54
HMGB3P23-201ENST00000414981 CKMP06732 381 aa5.43□□□□□ -1.54
HMGB3P23-201ENST00000414981 PDE6AP16499 860 aa5.43□□□□□ -1.54
HMGB3P23-201ENST00000414981 AMY2BP19961 511 aa5.43□□□□□ -1.54
HMGB3P23-201ENST00000414981 GJA4P35212 333 aa5.43□□□□□ -1.54
HMGB3P23-201ENST00000414981 MLLT6P55198 1093 aaPredicted RBP5.43□□□□□ -1.54
HMGB3P23-201ENST00000414981 RGL3Q3MIN7 710 aa5.43□□□□□ -1.54
HMGB3P23-201ENST00000414981 CCDC144BQ3MJ40 725 aa5.43□□□□□ -1.54
HMGB3P23-201ENST00000414981 PRAMEF18Q5VWM3 479 aa5.43□□□□□ -1.54
HMGB3P23-201ENST00000414981 BTBD8Q5XKL5 378 aa5.43□□□□□ -1.54
HMGB3P23-201ENST00000414981 MCTP2Q6DN12 878 aa5.43□□□□□ -1.54
HMGB3P23-201ENST00000414981 VASNQ6EMK4 673 aa5.43□□□□□ -1.54
HMGB3P23-201ENST00000414981 FAM124AQ86V42 546 aa5.43□□□□□ -1.54
HMGB3P23-201ENST00000414981 ZSWIM4Q9H7M6 989 aa5.43□□□□□ -1.54
HMGB3P23-201ENST00000414981 CBLCQ9ULV8 474 aa5.43□□□□□ -1.54
HMGB3P23-201ENST00000414981 SRPK3Q9UPE1 567 aa5.43□□□□□ -1.54
HMGB3P23-201ENST00000414981 CCDC66A2RUB6 948 aa5.42□□□□□ -1.54
HMGB3P23-201ENST00000414981 ZNF561-AS1K7EIQ3 104 aa5.42□□□□□ -1.54
HMGB3P23-201ENST00000414981 MAN2B1O00754 1011 aa5.42□□□□□ -1.54
HMGB3P23-201ENST00000414981 CLASP2O75122 1294 aaKnown RBP5.42□□□□□ -1.54
HMGB3P23-201ENST00000414981 SYN1P17600 705 aa5.42□□□□□ -1.54
HMGB3P23-201ENST00000414981 KCNA6P17658 529 aa5.42□□□□□ -1.54
HMGB3P23-201ENST00000414981 JAM2P57087 298 aa5.42□□□□□ -1.54
HMGB3P23-201ENST00000414981 PFKPQ01813 784 aa5.42□□□□□ -1.54
HMGB3P23-201ENST00000414981 BMS1Q14692 1282 aaKnown RBP5.42□□□□□ -1.54
HMGB3P23-201ENST00000414981 RTP5Q14D33 572 aa5.42□□□□□ -1.54
HMGB3P23-201ENST00000414981 FNDC3BQ53EP0 1204 aaKnown RBP5.42□□□□□ -1.54
HMGB3P23-201ENST00000414981 CD276Q5ZPR3 534 aa5.42□□□□□ -1.54
HMGB3P23-201ENST00000414981 TMC5Q6UXY8 1006 aa5.42□□□□□ -1.54
HMGB3P23-201ENST00000414981 EP400NLQ6ZTU2 488 aa5.42□□□□□ -1.54
HMGB3P23-201ENST00000414981 SCLYQ96I15 445 aa5.42□□□□□ -1.54
HMGB3P23-201ENST00000414981 LCORQ96JN0 433 aaPredicted RBP5.42□□□□□ -1.54
HMGB3P23-201ENST00000414981 YTHDC1Q96MU7 727 aaKnown RBP5.42□□□□□ -1.54
HMGB3P23-201ENST00000414981 CD244Q9BZW8 370 aa5.42□□□□□ -1.54
HMGB3P23-201ENST00000414981 TMEM168Q9H0V1 697 aa5.42□□□□□ -1.54
HMGB3P23-201ENST00000414981 L2HGDHQ9H9P8 463 aa5.42□□□□□ -1.54
HMGB3P23-201ENST00000414981 NCOA5Q9HCD5 579 aaKnown RBP5.42□□□□□ -1.54
HMGB3P23-201ENST00000414981 CROTQ9UKG9 612 aa5.42□□□□□ -1.54
HMGB3P23-201ENST00000414981 ATP23Q9Y6H3 246 aa5.42□□□□□ -1.54
HMGB3P23-201ENST00000414981 TCRBV16S1A1N1A0A5B0 115 aa5.41□□□□□ -1.54
HMGB3P23-201ENST00000414981 FAM90A27PA6NNH2 459 aa5.41□□□□□ -1.54
HMGB3P23-201ENST00000414981 PRICKLE3O43900 615 aaPredicted RBP5.41□□□□□ -1.54
HMGB3P23-201ENST00000414981 PTPN1P18031 435 aaKnown RBP5.41□□□□□ -1.54
HMGB3P23-201ENST00000414981 DNM2P50570 870 aa5.41□□□□□ -1.54
HMGB3P23-201ENST00000414981 DBPQ10586 325 aaPredicted RBP5.41□□□□□ -1.54
HMGB3P23-201ENST00000414981 FIGNQ5HY92 759 aa5.41□□□□□ -1.54
HMGB3P23-201ENST00000414981 UBXN11Q5T124 520 aa5.41□□□□□ -1.54
HMGB3P23-201ENST00000414981 HHIPL2Q6UWX4 724 aa5.41□□□□□ -1.54
HMGB3P23-201ENST00000414981 LGI4Q8N135 537 aa5.41□□□□□ -1.54
HMGB3P23-201ENST00000414981 IGDCC4Q8TDY8 1250 aa5.41□□□□□ -1.54
HMGB3P23-201ENST00000414981 CELF4Q9BZC1 486 aaKnown RBP5.41□□□□□ -1.54
HMGB3P23-201ENST00000414981 ADAM7Q9H2U9 754 aa5.41□□□□□ -1.54
HMGB3P23-201ENST00000414981 TRIM39Q9HCM9 518 aa5.41□□□□□ -1.54
HMGB3P23-201ENST00000414981 RBPJLQ9UBG7 517 aa5.41□□□□□ -1.54
HMGB3P23-201ENST00000414981 SFMBT1Q9UHJ3 866 aa5.41□□□□□ -1.54
HMGB3P23-201ENST00000414981 CNOT11Q9UKZ1 510 aaKnown RBP5.41□□□□□ -1.54
HMGB3P23-201ENST00000414981 DUSP10Q9Y6W6 482 aa5.41□□□□□ -1.54
HMGB3P23-201ENST00000414981 ZNF839A8K0R7 811 aa5.4□□□□□ -1.54
HMGB3P23-201ENST00000414981 B8ZZF3 427 aa5.4□□□□□ -1.54
HMGB3P23-201ENST00000414981 PRRG2O14669 202 aa5.4□□□□□ -1.54
HMGB3P23-201ENST00000414981 CYP1A1P04798 512 aaPredicted RBP5.4□□□□□ -1.54
HMGB3P23-201ENST00000414981 COL6A1P12109 1028 aa5.4□□□□□ -1.54
HMGB3P23-201ENST00000414981 SQSTM1Q13501 440 aa5.4□□□□□ -1.54
HMGB3P23-201ENST00000414981 SMAD2Q15796 467 aaKnown RBP5.4□□□□□ -1.54
HMGB3P23-201ENST00000414981 SKIDA1Q1XH10 827 aa5.4□□□□□ -1.54
HMGB3P23-201ENST00000414981 BORAQ6PGQ7 559 aa5.4□□□□□ -1.54
HMGB3P23-201ENST00000414981 OVCH1Q7RTY7 1134 aa5.4□□□□□ -1.54
HMGB3P23-201ENST00000414981 PTRH1Q86Y79 214 aaKnown RBP5.4□□□□□ -1.54
HMGB3P23-201ENST00000414981 ZCCHC14Q8WYQ9 949 aaKnown RBP5.4□□□□□ -1.54
HMGB3P23-201ENST00000414981 DDX1Q92499 740 aaKnown RBP5.4□□□□□ -1.54
HMGB3P23-201ENST00000414981 ZSWIM3Q96MP5 696 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms